Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1330
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ341263-1|ABC67466.1| 1471|Homo sapiens Fanconi anemia, complem... 36 0.16
BC013582-1|AAH13582.1| 241|Homo sapiens FANCD2 protein protein. 36 0.16
AF340183-1|AAK15369.1| 1451|Homo sapiens Fanconi anemia compleme... 36 0.16
AF273251-2|AAK18772.1| 1471|Homo sapiens Fanconi anemia compleme... 36 0.16
AF273251-1|AAK18773.1| 1451|Homo sapiens Fanconi anemia compleme... 36 0.16
AF230336-1|AAL05980.1| 1471|Homo sapiens Fanconi anemia compleme... 36 0.16
BC067263-1|AAH67263.1| 974|Homo sapiens exocyst complex compone... 31 4.7
BC026174-1|AAH26174.1| 474|Homo sapiens EXOC4 protein protein. 31 4.7
BC020607-1|AAH20607.1| 138|Homo sapiens EXOC4 protein protein. 31 4.7
AL834475-1|CAD39134.1| 761|Homo sapiens hypothetical protein pr... 31 4.7
AL831989-1|CAD89977.1| 974|Homo sapiens hypothetical protein pr... 31 4.7
AK027688-1|BAB55298.1| 974|Homo sapiens protein ( Homo sapiens ... 31 4.7
AF380839-1|AAK57456.1| 974|Homo sapiens secretory protein SEC8 ... 31 4.7
AF132734-1|AAF66445.1| 637|Homo sapiens REC8 protein. 31 4.7
AB051486-1|BAB21790.1| 966|Homo sapiens KIAA1699 protein protein. 31 4.7
>DQ341263-1|ABC67466.1| 1471|Homo sapiens Fanconi anemia,
complementation group D2 protein.
Length = 1471
Score = 35.5 bits (78), Expect = 0.16
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = +2
Query: 260 LQIRCQDMDIFKHYLFPNIVFRIKDNSEEQPSNDSVIKILLSVPILQPKLCDYIFEKATD 439
L+ +D D F++ L + ++ S + S+IK+LL + ILQP + +FEK +
Sbjct: 100 LESYIEDEDSFRNCLLSCERLQDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPE 159
Query: 440 QATQCKLRAMDTNNIKMLFKS-----GPIVDSEKMAMNLINLLEITSEKM 574
+ K D NI L S +VD + + ++ L+ I E +
Sbjct: 160 YFFENK--NSDEINIPRLIVSQLKWLDRVVDGKDLTTKIMQLISIAPENL 207
>BC013582-1|AAH13582.1| 241|Homo sapiens FANCD2 protein protein.
Length = 241
Score = 35.5 bits (78), Expect = 0.16
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = +2
Query: 260 LQIRCQDMDIFKHYLFPNIVFRIKDNSEEQPSNDSVIKILLSVPILQPKLCDYIFEKATD 439
L+ +D D F++ L + ++ S + S+IK+LL + ILQP + +FEK +
Sbjct: 100 LESYIEDEDSFRNCLLSCERLQDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPE 159
Query: 440 QATQCKLRAMDTNNIKMLFKS-----GPIVDSEKMAMNLINLLEITSEKM 574
+ K D NI L S +VD + + ++ L+ I E +
Sbjct: 160 YFFENK--NSDEINIPRLIVSQLKWLDRVVDGKDLTTKIMQLISIAPENL 207
>AF340183-1|AAK15369.1| 1451|Homo sapiens Fanconi anemia
complementation group D2 protein protein.
Length = 1451
Score = 35.5 bits (78), Expect = 0.16
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = +2
Query: 260 LQIRCQDMDIFKHYLFPNIVFRIKDNSEEQPSNDSVIKILLSVPILQPKLCDYIFEKATD 439
L+ +D D F++ L + ++ S + S+IK+LL + ILQP + +FEK +
Sbjct: 100 LESYIEDEDSFRNCLLSCERLQDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPE 159
Query: 440 QATQCKLRAMDTNNIKMLFKS-----GPIVDSEKMAMNLINLLEITSEKM 574
+ K D NI L S +VD + + ++ L+ I E +
Sbjct: 160 YFFENK--NSDEINIPRLIVSQLKWLDRVVDGKDLTTKIMQLISIAPENL 207
>AF273251-2|AAK18772.1| 1471|Homo sapiens Fanconi anemia
complementation group D2 protein, isoform 1 protein.
Length = 1471
Score = 35.5 bits (78), Expect = 0.16
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = +2
Query: 260 LQIRCQDMDIFKHYLFPNIVFRIKDNSEEQPSNDSVIKILLSVPILQPKLCDYIFEKATD 439
L+ +D D F++ L + ++ S + S+IK+LL + ILQP + +FEK +
Sbjct: 100 LESYIEDEDSFRNCLLSCERLQDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPE 159
Query: 440 QATQCKLRAMDTNNIKMLFKS-----GPIVDSEKMAMNLINLLEITSEKM 574
+ K D NI L S +VD + + ++ L+ I E +
Sbjct: 160 YFFENK--NSDEINIPRLIVSQLKWLDRVVDGKDLTTKIMQLISIAPENL 207
>AF273251-1|AAK18773.1| 1451|Homo sapiens Fanconi anemia
complementation group D2 protein, isoform 2 protein.
Length = 1451
Score = 35.5 bits (78), Expect = 0.16
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = +2
Query: 260 LQIRCQDMDIFKHYLFPNIVFRIKDNSEEQPSNDSVIKILLSVPILQPKLCDYIFEKATD 439
L+ +D D F++ L + ++ S + S+IK+LL + ILQP + +FEK +
Sbjct: 100 LESYIEDEDSFRNCLLSCERLQDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPE 159
Query: 440 QATQCKLRAMDTNNIKMLFKS-----GPIVDSEKMAMNLINLLEITSEKM 574
+ K D NI L S +VD + + ++ L+ I E +
Sbjct: 160 YFFENK--NSDEINIPRLIVSQLKWLDRVVDGKDLTTKIMQLISIAPENL 207
>AF230336-1|AAL05980.1| 1471|Homo sapiens Fanconi anemia
complementation group D2 protein protein.
Length = 1471
Score = 35.5 bits (78), Expect = 0.16
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
Frame = +2
Query: 260 LQIRCQDMDIFKHYLFPNIVFRIKDNSEEQPSNDSVIKILLSVPILQPKLCDYIFEKATD 439
L+ +D D F++ L + ++ S + S+IK+LL + ILQP + +FEK +
Sbjct: 100 LESYIEDEDSFRNCLLSCERLQDEEASMGASYSKSLIKLLLGIDILQPAIIKTLFEKLPE 159
Query: 440 QATQCKLRAMDTNNIKMLFKS-----GPIVDSEKMAMNLINLLEITSEKM 574
+ K D NI L S +VD + + ++ L+ I E +
Sbjct: 160 YFFENK--NSDEINIPRLIVSQLKWLDRVVDGKDLTTKIMQLISIAPENL 207
>BC067263-1|AAH67263.1| 974|Homo sapiens exocyst complex component
4 protein.
Length = 974
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 376 YFDDTVITGLFFR--IVLYSEYDIWEKIMFENIHILTSYLQILNS 248
Y DTV+T L + I LY D+W KI +LT YL + N+
Sbjct: 362 YLQDTVVTPLTQQEDIKLYDMADVWVKIQDVLQMLLTEYLDMKNT 406
>BC026174-1|AAH26174.1| 474|Homo sapiens EXOC4 protein protein.
Length = 474
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 376 YFDDTVITGLFFR--IVLYSEYDIWEKIMFENIHILTSYLQILNS 248
Y DTV+T L + I LY D+W KI +LT YL + N+
Sbjct: 362 YLQDTVVTPLTQQEDIKLYDMADVWVKIQDVLQMLLTEYLDMKNT 406
>BC020607-1|AAH20607.1| 138|Homo sapiens EXOC4 protein protein.
Length = 138
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 376 YFDDTVITGLFFR--IVLYSEYDIWEKIMFENIHILTSYLQILNS 248
Y DTV+T L + I LY D+W KI +LT YL + N+
Sbjct: 26 YLQDTVVTPLTQQEDIKLYDMADVWVKIQDVLQMLLTEYLDMKNT 70
>AL834475-1|CAD39134.1| 761|Homo sapiens hypothetical protein
protein.
Length = 761
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 376 YFDDTVITGLFFR--IVLYSEYDIWEKIMFENIHILTSYLQILNS 248
Y DTV+T L + I LY D+W KI +LT YL + N+
Sbjct: 149 YLQDTVVTPLTQQEDIKLYDMADVWVKIQDVLQMLLTEYLDMKNT 193
>AL831989-1|CAD89977.1| 974|Homo sapiens hypothetical protein
protein.
Length = 974
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 376 YFDDTVITGLFFR--IVLYSEYDIWEKIMFENIHILTSYLQILNS 248
Y DTV+T L + I LY D+W KI +LT YL + N+
Sbjct: 362 YLQDTVVTPLTQQEDIKLYDMADVWVKIQDVLQMLLTEYLDMKNT 406
>AK027688-1|BAB55298.1| 974|Homo sapiens protein ( Homo sapiens
cDNA FLJ14782 fis, clone NT2RP4000524, highly similar to
Mus musculus Sec8 mRNA. ).
Length = 974
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 376 YFDDTVITGLFFR--IVLYSEYDIWEKIMFENIHILTSYLQILNS 248
Y DTV+T L + I LY D+W KI +LT YL + N+
Sbjct: 362 YLQDTVVTPLTQQEDIKLYDMADVWVKIQDVLQMLLTEYLDMKNT 406
>AF380839-1|AAK57456.1| 974|Homo sapiens secretory protein SEC8
protein.
Length = 974
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 376 YFDDTVITGLFFR--IVLYSEYDIWEKIMFENIHILTSYLQILNS 248
Y DTV+T L + I LY D+W KI +LT YL + N+
Sbjct: 362 YLQDTVVTPLTQQEDIKLYDMADVWVKIQDVLQMLLTEYLDMKNT 406
>AF132734-1|AAF66445.1| 637|Homo sapiens REC8 protein.
Length = 637
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 376 YFDDTVITGLFFR--IVLYSEYDIWEKIMFENIHILTSYLQILNS 248
Y DTV+T L + I LY D+W KI +LT YL + N+
Sbjct: 25 YLQDTVVTPLTQQEDIKLYDMADVWVKIQDVLQMLLTEYLDMKNT 69
>AB051486-1|BAB21790.1| 966|Homo sapiens KIAA1699 protein protein.
Length = 966
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -3
Query: 376 YFDDTVITGLFFR--IVLYSEYDIWEKIMFENIHILTSYLQILNS 248
Y DTV+T L + I LY D+W KI +LT YL + N+
Sbjct: 354 YLQDTVVTPLTQQEDIKLYDMADVWVKIQDVLQMLLTEYLDMKNT 398
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,861,579
Number of Sequences: 237096
Number of extensions: 1512668
Number of successful extensions: 6589
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 6505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6589
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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