Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1330
         (648 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92973-3|CAB07491.1|  244|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U41026-3|AAL02447.3|  817|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AM748823-1|CAO72177.1|  491|Caenorhabditis elegans hexosaminidas...    28   6.6  
AC103567-3|AAL35732.2|  438|Caenorhabditis elegans Hypothetical ...    28   6.6  

>Z92973-3|CAB07491.1|  244|Caenorhabditis elegans Hypothetical
           protein Y6G8.3 protein.
          Length = 244

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 367 DTVITGLFFRIVLYSEYDIWEKIMFENIHILTSYLQILNSS 245
           DT++   FF     +E D W KI+ EN + L   LQ +N +
Sbjct: 184 DTILQSKFFTYQQITEVDTWIKII-ENANTLADTLQRINKT 223


>Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical protein
            F59F3.1 protein.
          Length = 1227

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 111  ICLRDSGLTLKDPPEKNCASRESIQIIRNIKKNLESHFDYPRNVGELFKIC 263
            ICL +   TL   P  NC +   I+ IRN  +N +  + +   + EL K+C
Sbjct: 1097 ICLYEI-FTLGGTPYPNCDTFNVIEFIRNGNRNKQPEYCHD-EIYELMKVC 1145


>U41026-3|AAL02447.3|  817|Caenorhabditis elegans Hypothetical
           protein C28G1.3 protein.
          Length = 817

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 220 ISITLETLENYLKFADKMSGYGYFQTL 300
           I++ L  LENY K  ++MS   Y+Q L
Sbjct: 148 IAVCLPVLENYAKLQEQMSNRKYYQAL 174


>Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical
           protein ZK970.5 protein.
          Length = 1143

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +2

Query: 332 DNSEEQPSNDSVIKILLSV-PILQPKLCDYIF 424
           +N EE+PS ++V K+L  + P  +  L D++F
Sbjct: 808 ENPEERPSAENVCKVLFDMTPNTEDNLMDHVF 839


>AM748823-1|CAO72177.1|  491|Caenorhabditis elegans hexosaminidase
           protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +3

Query: 147 PPEKNCASRESIQIIRNIKKNLESHFDYPRNVGELF 254
           P ++     E+I+I++N+KK+L     Y  +  E+F
Sbjct: 435 PDQQPSPDSEAIEILKNLKKSLNQSILYKTDADEVF 470


>AC103567-3|AAL35732.2|  438|Caenorhabditis elegans Hypothetical
           protein Y51F10.5 protein.
          Length = 438

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +3

Query: 147 PPEKNCASRESIQIIRNIKKNLESHFDYPRNVGELF 254
           P ++     E+I+I++N+KK+L     Y  +  E+F
Sbjct: 382 PDQQPSPDSEAIEILKNLKKSLNQSILYKTDADEVF 417


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,789,239
Number of Sequences: 27780
Number of extensions: 277645
Number of successful extensions: 665
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)