Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1328
         (736 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5AB99 Cluster: Putative uncharacterized protein MDM20;...    34   4.2  
UniRef50_A6ERC9 Cluster: Outer membrane phospholipase A; n=1; un...    33   7.3  

>UniRef50_Q5AB99 Cluster: Putative uncharacterized protein MDM20;
           n=1; Candida albicans|Rep: Putative uncharacterized
           protein MDM20 - Candida albicans (Yeast)
          Length = 745

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -1

Query: 385 KGFLNFLLEFLKSHIRFSTTVNINGISL-YVVLTILYVDIYVGLRGYVTRTITYIGTNQI 209
           +GF N +   L+  I FS  +  N ISL + V  IL +   +G  GY+   I Y+ TN+ 
Sbjct: 477 QGFDNGVFNKLEGFINFSKRMQ-NSISLNFTVAKILQISTILGTDGYLNYFIHYLKTNEA 535

Query: 208 IM 203
           ++
Sbjct: 536 LI 537


>UniRef50_A6ERC9 Cluster: Outer membrane phospholipase A; n=1;
           unidentified eubacterium SCB49|Rep: Outer membrane
           phospholipase A - unidentified eubacterium SCB49
          Length = 293

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = +1

Query: 76  LRNTLYFSIMEDNYFILIIPLN---NTYAMNVFVPLYIMVTVTQDTLLFD 216
           +++  YFSI +DNYFI  +P N   N+   NV   +     +T+ TL +D
Sbjct: 50  IKDLPYFSIHKDNYFITGVPTNTAINSTTANVKYQVSFKQIITRGTLPYD 99


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,160,984
Number of Sequences: 1657284
Number of extensions: 10676416
Number of successful extensions: 19505
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19503
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)