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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1326
         (679 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56628| Best HMM Match : Actin (HMM E-Value=0)                      224   6e-59
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)             219   1e-57
SB_56| Best HMM Match : Actin (HMM E-Value=0)                         218   4e-57
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)              217   9e-57
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)              213   8e-56
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)             118   3e-27
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)              83   3e-16
SB_54| Best HMM Match : Actin (HMM E-Value=0)                          80   2e-15
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)             70   2e-12
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)                  60   2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)                 51   7e-07
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)                  47   1e-05
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)                     43   2e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   5e-04
SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.21 
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)               33   0.28 
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.65 
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)                    31   0.65 
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.5  
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)                      30   2.0  
SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_21074| Best HMM Match : NadA (HMM E-Value=2)                        29   2.6  
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)                    29   2.6  
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)                  29   2.6  
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.6  
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)                       29   2.6  
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.6  
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)                 29   3.5  
SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.5  
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)                    29   3.5  
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)                  29   3.5  
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.6  
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.0  
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.0  
SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078)              28   6.0  
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   8.0  
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)          28   8.0  
SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1)                  28   8.0  

>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
          Length = 376

 Score =  224 bits (547), Expect = 6e-59
 Identities = 123/196 (62%), Positives = 129/196 (65%)
 Frame = +2

Query: 83  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHR 262
           MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD  +
Sbjct: 1   MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 263 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKM 442
           +K                      +     FYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 443 TQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASX 622
           TQIMFETFN+PAMYVAIQAVLS                     VPIYE     P      
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL-PHAILRL 179

Query: 623 T*PVCDLQDYLMKILT 670
                DL DYLMKILT
Sbjct: 180 DLAGRDLTDYLMKILT 195


>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 376

 Score =  219 bits (536), Expect = 1e-57
 Identities = 122/196 (62%), Positives = 128/196 (65%)
 Frame = +2

Query: 83  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHR 262
           M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD  +
Sbjct: 1   MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 263 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKM 442
           +K                      +     FYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 443 TQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASX 622
           TQIMFETFN+PAMYVAIQAVLS                     VPIYE     P      
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL-PHAIIRL 179

Query: 623 T*PVCDLQDYLMKILT 670
                DL DYLMKILT
Sbjct: 180 DLAGRDLTDYLMKILT 195


>SB_56| Best HMM Match : Actin (HMM E-Value=0)
          Length = 375

 Score =  218 bits (532), Expect = 4e-57
 Identities = 121/194 (62%), Positives = 127/194 (65%)
 Frame = +2

Query: 89  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
           ++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD  ++K
Sbjct: 2   EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 269 XXXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 448
                                 +     FYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 449 IMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
           IMFETFN+PAMYVAIQAVLS                     VPIYE     P        
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL-PHAILRLDL 180

Query: 629 PVCDLQDYLMKILT 670
              DL DYLMKILT
Sbjct: 181 AGRDLTDYLMKILT 194


>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 375

 Score =  217 bits (529), Expect = 9e-57
 Identities = 120/194 (61%), Positives = 127/194 (65%)
 Frame = +2

Query: 89  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
           +++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD  ++K
Sbjct: 2   EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61

Query: 269 XXXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 448
                                 +     FYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121

Query: 449 IMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
           IMFETFN+PAMYVAIQAVLS                     VPIYE     P        
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL-PHAILRLDL 180

Query: 629 PVCDLQDYLMKILT 670
              DL DYLMKILT
Sbjct: 181 AGRDLTDYLMKILT 194


>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 349

 Score =  213 bits (521), Expect = 8e-56
 Identities = 104/142 (73%), Positives = 112/142 (78%)
 Frame = +2

Query: 83  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHR 262
           M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD  +
Sbjct: 1   MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 263 AKXXXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKM 442
           +K                      +     FYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 443 TQIMFETFNTPAMYVAIQAVLS 508
           TQIMFETFN+PAMYVAIQAVLS
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLS 142



 Score =  106 bits (254), Expect = 2e-23
 Identities = 55/105 (52%), Positives = 61/105 (58%)
 Frame = +1

Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFLQ*AACRPRGTPSPAH*GSPQPQGQQR 435
           AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF       P   P         P+  + 
Sbjct: 59  AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118

Query: 436 EDDPDHVRNIQHARHVRRHPSRALVYASGRTTGIVLDSGDGVSHT 570
           +                   +   +YASGRTTGIV+DSGDGVSHT
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHT 163


>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 338

 Score =  118 bits (285), Expect = 3e-27
 Identities = 53/60 (88%), Positives = 58/60 (96%)
 Frame = +2

Query: 89  DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
           D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD  ++K
Sbjct: 2   DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61



 Score = 67.7 bits (158), Expect = 8e-12
 Identities = 30/33 (90%), Positives = 30/33 (90%)
 Frame = +1

Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 354
           AQSKRGILTLKYPIEHGIVTNWDDMEKI   TF
Sbjct: 58  AQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90



 Score = 51.6 bits (118), Expect = 6e-07
 Identities = 37/81 (45%), Positives = 40/81 (49%)
 Frame = +2

Query: 428 NREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVPIYERIRTPPR 607
           N + M +IMFETFN+PAMYVAIQAVLS                     VPIYE     P 
Sbjct: 78  NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYAL-PH 136

Query: 608 HPASXT*PVCDLQDYLMKILT 670
                     DL DYLMKILT
Sbjct: 137 AIIRLDLAGRDLTDYLMKILT 157


>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score = 82.6 bits (195), Expect = 3e-16
 Identities = 49/139 (35%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
 Frame = +2

Query: 101 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDGHRAKXX 274
           + +V DNG+G  K G+AG + P  +FPS+VGRP  R    +  +  KD  VGD       
Sbjct: 7   SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66

Query: 275 XXXXXXXXXXXXXLTGMTWRRFGIIPF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 451
                              +      F  +++ + P    VLLTE PLNP  NREKM ++
Sbjct: 67  MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126

Query: 452 MFETFNTPAMYVAIQAVLS 508
           MFE +    +Y+AIQAVL+
Sbjct: 127 MFENYQFEGVYIAIQAVLT 145



 Score = 58.8 bits (136), Expect = 4e-09
 Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
 Frame = +1

Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFLQ*AA-CRPRGTPSPAH*GSPQPQGQQ 432
           A   R +L + YP+++GIV NWDDM+ +W +TF +      PR T          P   +
Sbjct: 61  ASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNR 120

Query: 433 REDDPDHVRNIQHARHVRRHPSRALVYASGRTTGIVLDSGDGVSH 567
            +       N Q         +   +YA G  TG+V+DSGDGV+H
Sbjct: 121 EKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTH 165


>SB_54| Best HMM Match : Actin (HMM E-Value=0)
          Length = 2486

 Score = 79.8 bits (188), Expect = 2e-15
 Identities = 34/51 (66%), Positives = 44/51 (86%)
 Frame = +2

Query: 356  YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 508
            +++LRV  E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++
Sbjct: 2136 FDQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMA 2186



 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = +2

Query: 107  LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 208
            +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = +1

Query: 508  VYASGRTTGIVLDSGDGVSHT 570
            +YASGRTTG V D GDGVSHT
Sbjct: 2187 LYASGRTTGTVFDCGDGVSHT 2207


>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
          Length = 367

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 28/42 (66%), Positives = 37/42 (88%)
 Frame = +2

Query: 383 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 508
           +HPVLLTEAPLNP+ NREK  ++ FETFN PA+++++QAVLS
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLS 167



 Score = 41.5 bits (93), Expect = 6e-04
 Identities = 16/21 (76%), Positives = 21/21 (100%)
 Frame = +1

Query: 508 VYASGRTTGIVLDSGDGVSHT 570
           +YA+GRTTG+VLD+GDGVSH+
Sbjct: 168 LYATGRTTGVVLDAGDGVSHS 188


>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
          Length = 1392

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 27/39 (69%), Positives = 29/39 (74%)
 Frame = +2

Query: 92   EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 208
            E    LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392


>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
          Length = 921

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 21/49 (42%), Positives = 32/49 (65%)
 Frame = +2

Query: 77  FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 223
           FK+      A+V+DNG G+ K GFAGD  PR + P++VG P+   +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741


>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
          Length = 240

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 18/41 (43%), Positives = 30/41 (73%)
 Frame = +2

Query: 386 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 508
           HP+L++EA  N +  REK+T++MFE +N PA ++   +VL+
Sbjct: 34  HPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKNSVLT 74


>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
          Length = 152

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 31/74 (41%), Positives = 36/74 (48%)
 Frame = +2

Query: 449 IMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
           IMFE FN+PA+YVAIQAVLS           +         VPIYE     P        
Sbjct: 1   IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYAL-PHAILRLDL 59

Query: 629 PVCDLQDYLMKILT 670
              DL DYLMK++T
Sbjct: 60  AGRDLTDYLMKLMT 73



 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +1

Query: 508 VYASGRTTGIVLDSGDGVSH 567
           +YASGRTTG+V DSGDGVSH
Sbjct: 21  LYASGRTTGVVFDSGDGVSH 40


>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 198

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 21/39 (53%), Positives = 27/39 (69%)
 Frame = -1

Query: 205 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 89
           MA  + D GE+G+ SI+S ETGLAHTGAI+  Q  +  V
Sbjct: 1   MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39


>SB_48294| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 650

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
 Frame = +2

Query: 359 NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVP--P 532
           N L++ PE + VL  +  LN  AN   +           A  V   A  S   P VP  P
Sbjct: 157 NTLKITPENY-VLTNKQTLNLIANNALLVNTASPHTAHRAFIVTTCASTSTESPAVPVKP 215

Query: 533 VSCWTPATVSPTPVPIYERIRTPPRHPAS 619
            S  T A  +PTP+P+       P   AS
Sbjct: 216 ASTPTFAKNAPTPIPLTSVAPESPHPQAS 244


>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
          Length = 372

 Score = 32.7 bits (71), Expect = 0.28
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = +1

Query: 286 KYPIEHGIVTNWDDMEKIWHHTFLQ*AACRP 378
           K+PI H IV +WD ME+ W     +     P
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEP 329


>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 120

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
          Length = 170

 Score = 31.5 bits (68), Expect = 0.65
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
           GNT R    PAKPAL++P P S T
Sbjct: 80  GNTNRRTRIPAKPALNLPSPPSKT 103


>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 749

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = -2

Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
           GNT R    PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563


>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1259

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +1

Query: 409 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 501
           SP P+   R D+P  V     A HV  HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295


>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2174

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 5/101 (4%)
 Frame = +1

Query: 388  PSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALVYASGRTTGIV-----LDSG 552
            P+P H   P+P G Q     +   N      V R  S  +   SG  TG +     LDS 
Sbjct: 1373 PTPGH--RPEPHGAQYSSGQEQSNN-----EVERADSSTV---SGSDTGAIPRQRTLDSR 1422

Query: 553  DGVSHTRAHLRKDTHSPTPSCVXDLAGLRPPGLPYEDPHPS 675
              ++       +DT +P+ S +     LR   + YED  PS
Sbjct: 1423 GNITQILRSYIRDTQTPSYSTLEAQPQLRDDVISYEDRLPS 1463


>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
          Length = 272

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -1

Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 224 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259


>SB_58292| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 127

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
 Frame = +2

Query: 389 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVV---PPVSCWTPATV 559
           P L+T  PL        +T       NTP +      +++ T P+V   PP+   TP  V
Sbjct: 34  PSLVTTTPLLVTTTPSLVTTTPLLVTNTPPLDTTTLPLVTITPPLVITAPPLVTTTPPLV 93

Query: 560 SPTPV 574
           + TP+
Sbjct: 94  TTTPL 98


>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 591

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -1

Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 419 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454


>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
          Length = 358

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -1

Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 282 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317


>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
          Length = 339

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -1

Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 260 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295


>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
          Length = 635

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = +1

Query: 175 VPLDRGKAPPSGRDGRYGTEGLLCRRWAQSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 348
           V L +     +GR+   G+   +CR+    K  ++TL + I  G+  +   D  EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496

Query: 349 T 351
           T
Sbjct: 497 T 497


>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 181

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -1

Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137


>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
          Length = 402

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -1

Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 102 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137


>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 458

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = -1

Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
           V+LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 136 VVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171


>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
          Length = 439

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 22/72 (30%), Positives = 27/72 (37%)
 Frame = +2

Query: 389 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPT 568
           PVL   A   P A   + TQ      + P    ++  V +   P  PPV    P TV P 
Sbjct: 22  PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80

Query: 569 PVPIYERIRTPP 604
           PV        PP
Sbjct: 81  PVVTDAPTTVPP 92


>SB_32722| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 603

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 527 PPVSCWTPATVSPTPVPIYERIRTPPRHPASXT 625
           PP+    P+ + P   P+ + + TPPR P + T
Sbjct: 433 PPLPQPPPSIIPPPTTPLPQTVPTPPRPPTTMT 465


>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
          Length = 570

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -1

Query: 238 VLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 128
           ++LSH + H  M     D  +HG RS  SCET L  T
Sbjct: 184 IVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219


>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
          Length = 580

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 292 PIEHGIVTNWDDMEKIWHHTF 354
           P + G + NWD  ++IW +TF
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTF 312



 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +2

Query: 95  EVAALVVDNGSGMCKAGFAGDDAPRAV 175
           ++A LV+D G+   K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258


>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1308

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 16/57 (28%), Positives = 23/57 (40%)
 Frame = +2

Query: 407  APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVP 577
            A   P A       +  + +NTP     I +      P +PP +  TP+   P PVP
Sbjct: 888  ASYQPSAPSSMPAPVPLQPYNTPMP--PISSTPYQAPPTLPPTTLTTPSWSQPVPVP 942


>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = -2

Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
           GNT R     AKPAL++P P S T
Sbjct: 40  GNTNRRTRIQAKPALNLPSPPSKT 63


>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 635

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -2

Query: 180 GNTARGASSPAKPALHIPEPLSTT 109
           GNT R    PAKP L IP P + T
Sbjct: 68  GNTNRRTRIPAKPTLTIPSPPTKT 91


>SB_39621| Best HMM Match : Extensin_2 (HMM E-Value=0.078)
          Length = 539

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
 Frame = +2

Query: 527 PPVSCWTPATVSPTPV---PIYERIRTPPRHPASXT*PVCDLQD 649
           PP S  +P  + P      P++ + +  PRH  S T PVC +QD
Sbjct: 311 PPESLPSPPPLPPQDYEEEPLHNKRKVRPRHERSATEPVC-MQD 353


>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1071

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +2

Query: 443 TQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTP 571
           +Q+  E +N P+     +    CT   +P    +TP T   TP
Sbjct: 611 SQVNSERYNAPSQSPCTERYTPCTERYIPCTERYTPCTERYTP 653


>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
          Length = 481

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 9/39 (23%), Positives = 20/39 (51%)
 Frame = +2

Query: 458 ETFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPV 574
           + +  P  +  +Q +++   P + P +C TP  +SP  +
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISI 326


>SB_10324| Best HMM Match : IFP_35_N (HMM E-Value=0.1)
          Length = 798

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 22/79 (27%), Positives = 32/79 (40%)
 Frame = +2

Query: 365 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCW 544
           L+ APE  P+   EAP  PK +  ++ Q   +   TP     +Q +L  T   V      
Sbjct: 330 LKKAPEHKPLDEVEAPQFPKLHHVELPQTEKKVDETPRF---VQPLLKKTTVNVKGPDQK 386

Query: 545 TPATVSPTPVPIYERIRTP 601
             A   P  +P    + TP
Sbjct: 387 DKAEPEPLHLPKLHHVETP 405


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,585,160
Number of Sequences: 59808
Number of extensions: 658107
Number of successful extensions: 2360
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 2005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2325
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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