Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1326
(679 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 204 6e-53
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 201 3e-52
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 201 3e-52
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 198 3e-51
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 198 4e-51
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 198 4e-51
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 198 4e-51
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 197 5e-51
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 197 5e-51
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 175 2e-44
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 138 2e-33
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 103 1e-22
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 93 2e-19
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 72 3e-13
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 66 2e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 66 3e-11
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 1e-08
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 46 3e-05
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 44 1e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.099
At1g14380.1 68414.m01704 calmodulin-binding family protein conta... 32 0.40
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.53
At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid t... 31 0.93
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 31 0.93
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 30 1.6
At1g58370.1 68414.m06640 glycosyl hydrolase family 10 protein / ... 30 1.6
At2g10070.2 68415.m01044 expressed protein very low similarity t... 29 2.1
At2g10070.1 68415.m01045 expressed protein very low similarity t... 29 2.1
At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid t... 29 2.8
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 29 2.8
At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-relate... 29 2.8
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 29 3.7
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 28 4.9
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 28 6.5
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 27 8.6
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 8.6
At2g05290.1 68415.m00557 expressed protein similar to zinc finge... 27 8.6
At1g75080.2 68414.m08720 brassinosteroid signalling positive reg... 27 8.6
At1g75080.1 68414.m08719 brassinosteroid signalling positive reg... 27 8.6
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 204 bits (497), Expect = 6e-53
Identities = 117/194 (60%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKX 271
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 272 XXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 451
+ FYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 452 MFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
MFETFNTPAMYVAIQAVLS + + VS T VPIYE P
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL-PHAILRLDL 182
Query: 629 PVCDLQDYLMKILT 670
DL DYLMKILT
Sbjct: 183 AGRDLTDYLMKILT 196
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 201 bits (491), Expect = 3e-52
Identities = 116/194 (59%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKX 271
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 272 XXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 451
+ FYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 452 MFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
MFETFNTPAMYVAIQAVLS + + VS T VPIYE P
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL-PHAILRLDL 182
Query: 629 PVCDLQDYLMKILT 670
DL D+LMKILT
Sbjct: 183 AGRDLTDHLMKILT 196
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 201 bits (491), Expect = 3e-52
Identities = 116/194 (59%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKX 271
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 272 XXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 451
+ FYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 452 MFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
MFETFNTPAMYVAIQAVLS + + VS T VPIYE P
Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL-PHAILRLDL 182
Query: 629 PVCDLQDYLMKILT 670
DL D+LMKILT
Sbjct: 183 AGRDLTDHLMKILT 196
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 198 bits (483), Expect = 3e-51
Identities = 115/194 (59%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKX 271
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 272 XXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 451
+ FYNELRVAPEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 452 MFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
MFETFN PAMYVAIQAVLS + + VS T VPIYE P
Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL-PHAILRLDL 182
Query: 629 PVCDLQDYLMKILT 670
DL D LMKILT
Sbjct: 183 AGRDLTDSLMKILT 196
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 198 bits (482), Expect = 4e-51
Identities = 111/194 (57%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKX 271
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 272 XXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 451
+ FYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 452 MFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
MFETFN+PAMYVAIQAVLS + + VS T VPIYE + P
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGF-SLPHAILRLDL 182
Query: 629 PVCDLQDYLMKILT 670
DL DYLMKILT
Sbjct: 183 AGRDLTDYLMKILT 196
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 198 bits (482), Expect = 4e-51
Identities = 111/194 (57%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKX 271
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 272 XXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 451
+ FYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 452 MFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
MFETFN+PAMYVAIQAVLS + + VS T VPIYE + P
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGF-SLPHAILRLDL 182
Query: 629 PVCDLQDYLMKILT 670
DL DYLMKILT
Sbjct: 183 AGRDLTDYLMKILT 196
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 198 bits (482), Expect = 4e-51
Identities = 111/194 (57%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKX 271
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGD ++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 272 XXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 451
+ FYNELR+APEEHPVLLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 452 MFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
MFETFN+PAMYVAIQAVLS + + VS T VPIYE + P
Sbjct: 125 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGF-SLPHAILRLDL 182
Query: 629 PVCDLQDYLMKILT 670
DL DYLMKILT
Sbjct: 183 AGRDLTDYLMKILT 196
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 197 bits (481), Expect = 5e-51
Identities = 114/194 (58%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKX 271
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 272 XXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 451
+ FYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 452 MFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
MFETFN PAMYVAIQAVLS + + VS T VPIYE P
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL-PHAILRLDL 182
Query: 629 PVCDLQDYLMKILT 670
DL D LMKILT
Sbjct: 183 AGRDLTDALMKILT 196
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 197 bits (481), Expect = 5e-51
Identities = 114/194 (58%), Positives = 124/194 (63%), Gaps = 1/194 (0%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKX 271
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGD ++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 272 XXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 451
+ FYNELRVAPEEHP+LLTEAPLNPKANREKMTQI
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 452 MFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
MFETFN PAMYVAIQAVLS + + VS T VPIYE P
Sbjct: 125 MFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYAL-PHAILRLDL 182
Query: 629 PVCDLQDYLMKILT 670
DL D LMKILT
Sbjct: 183 AGRDLTDALMKILT 196
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 175 bits (427), Expect = 2e-44
Identities = 99/193 (51%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKX 271
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGD +A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 272 XXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 451
+ FYNELR+ PEEHP+LLTEAPLNPK NREKMTQI
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 452 MFETFNTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT* 628
MFE+F P+MY+ IQAVLS + + + VS T VPIYE P
Sbjct: 126 MFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYAL-PHAILRLDL 183
Query: 629 PVCDLQDYLMKIL 667
DL +YL KI+
Sbjct: 184 AGRDLTEYLTKIM 196
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 138 bits (335), Expect = 2e-33
Identities = 86/189 (45%), Positives = 105/189 (55%), Gaps = 1/189 (0%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKXXXXXX 286
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+ A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 287 XXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 466
+ FYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 467 NTPAMYVAIQAVLSC-TRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT*PVCDL 643
+ PAMYV++Q+VL + V VS T VP+YE P DL
Sbjct: 119 DVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT-VPVYEGYAL-PHGILRLDLGGRDL 176
Query: 644 QDYLMKILT 670
DYL++I+T
Sbjct: 177 TDYLIEIMT 185
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 103 bits (247), Expect = 1e-22
Identities = 52/98 (53%), Positives = 61/98 (62%)
Frame = +2
Query: 215 MVGMGQKDSYVGDGHRAKXXXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPV 394
MVGM + D +VGD A+ + FY+ELRVAPEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 395 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 508
LLTEAPLNPKA+REKMTQIMFETF P+MY+ +QA LS
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQAALS 98
Score = 84.2 bits (199), Expect = 7e-17
Identities = 43/104 (41%), Positives = 57/104 (54%)
Frame = +1
Query: 256 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFLQ*AACRPRGTPSPAH*GSPQPQGQQR 435
A+++ GILTL YP+EHG+V+NWDDMEKIW+HTF P P P+ +
Sbjct: 15 AEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADRE 74
Query: 436 EDDPDHVRNIQHARHVRRHPSRALVYASGRTTGIVLDSGDGVSH 567
+ + ++ASGRTTG VLDSGDGVS+
Sbjct: 75 KMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSY 118
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 92.7 bits (220), Expect = 2e-19
Identities = 50/136 (36%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDGHRAKXXXX 280
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 281 XXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 460
FYNEL++ P + +LLT+ PLNP NREKM + MFE
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMFE 126
Query: 461 TFNTPAMYVAIQAVLS 508
+N +++ IQAVL+
Sbjct: 127 KYNFAGVFIQIQAVLT 142
Score = 58.4 bits (135), Expect = 4e-09
Identities = 31/97 (31%), Positives = 43/97 (44%)
Frame = +1
Query: 277 LTLKYPIEHGIVTNWDDMEKIWHHTFLQ*AACRPRGTPSPAH*GSPQPQGQQREDDPDHV 456
L + YP+ +GIV NWDDME +W H F P P + +
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 457 RNIQHARHVRRHPSRALVYASGRTTGIVLDSGDGVSH 567
A + + +YA G TG+V+DSGDGV+H
Sbjct: 126 EKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTH 162
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 72.1 bits (169), Expect = 3e-13
Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 21/156 (13%)
Frame = +2
Query: 104 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 229
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 230 QKDSYVGDGHRAKXXXXXXXXXXXXXXXLTGMTW---RRFGIIPFYNELRVAPEEHPVLL 400
D Y+GD AK W R+ +N LR PE+H LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 401 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 508
TE+PL P +RE +I+FETFN P +Y+A+ +VL+
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLYIAVNSVLA 160
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 6/101 (5%)
Frame = +1
Query: 283 LKYPIEHGIVTNWDDMEKIWHHTFLQ*AACRPRGTPSPAH*GSPQPQGQQREDDPDHVRN 462
L YPIEHG V +WD ME+ W C P SP + RE + +
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLT-ESPLTPPESREYTGEILFE 144
Query: 463 IQHARHVRRHPSRALVYASGRT------TGIVLDSGDGVSH 567
+ + + L A+G T TG+V+D GDG +H
Sbjct: 145 TFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATH 185
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAKXXXXXX 286
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD +
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 287 XXXXXXXXXLTGMTWRRFGIIPF---YNELRVAPE----EHPVLLTEAPLNPKANREKMT 445
+ + ++ F I+ + Y R+ +HP+L+TE NP +R KM
Sbjct: 78 TRSGPRSPFDSNVVYQ-FEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMA 136
Query: 446 QIMFETFNTPAMYVAIQAVLS 508
+++FET+ PA+ + A S
Sbjct: 137 ELLFETYGVPAVAFGVDAAFS 157
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 65.7 bits (153), Expect = 3e-11
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV---GMGQKDSYVGDGHR 262
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + +D+ D +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 263 AK-XXXXXXXXXXXXXXXLTGMTWRRFGII------------PFYNELRVAPEEHPVLLT 403
K + ++ + GI+ F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 404 EAPLNPKANREK 439
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 265 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFLQ*AACRPRGTPSPAH*GSPQPQGQQRED 441
+R + + P + GIVT+WD ++ +W H F P T P P QQ+ +
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDP--TEHPMLLAEPPLNSQQQRE 135
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 92 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 193
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/52 (44%), Positives = 34/52 (65%)
Frame = +2
Query: 353 FYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 508
F + L + P EHP+LL E PLN + REK ++MFE + PA+++A VL+
Sbjct: 114 FKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLT 165
Score = 40.7 bits (91), Expect = 9e-04
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Frame = +1
Query: 265 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFLQ*AACRPRGTPSPAH*GSPQPQGQQREDD 444
+R + + PI+ GIV++WD ++ IW H F P T P P QQ+ +
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDP--TEHPMLLAEPPLNTQQQREK 142
Query: 445 PDHVRNIQH---ARHVRRHPSRALVYASGRTTGIVLDSGDG 558
+ ++ A + ++P +A+GR T +V+D G G
Sbjct: 143 AAELMFEKYKVPALFMAKNPV-LTSFATGRATSLVVDCGGG 182
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 45.6 bits (103), Expect = 3e-05
Identities = 43/140 (30%), Positives = 55/140 (39%), Gaps = 5/140 (3%)
Frame = +2
Query: 104 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQ----KDSYVGDGHRAK 268
ALVVD GS KAG A D +P + PS + R G +D + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKRMVDDGSSSADNPTTVFEDVTLDPIERGL 62
Query: 269 XXXXXXXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 448
TG+ W E +L T+ PKA RE++ Q
Sbjct: 63 IRDWDAMEDLLRYVVYTGLGWEE-------------GNEGNILFTDPLCTPKAIREQLVQ 109
Query: 449 IMFETFNTPAMYVAIQAVLS 508
+MFETFN Y + QAVLS
Sbjct: 110 LMFETFNVSGFYASEQAVLS 129
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 43.6 bits (98), Expect = 1e-04
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Frame = +2
Query: 107 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD-GHRAKXXXXX 283
+V+DNG G+ KAG G+ P V P+ + +P + + + +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTTLSDEIDLTSAAVRRP 64
Query: 284 XXXXXXXXXXLTGMTWRRFGIIPFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 463
L W F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 65 IDRGYLINSDLQREIWSHL----FTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 464 FNTPAMYVA 490
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.099
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 228 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 91
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g14380.1 68414.m01704 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 664
Score = 31.9 bits (69), Expect = 0.40
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 415 QPQGQQREDDPDHVRNIQHARHVRRHPSRALVYASGRTTGIVLDSGDGVSHTRAHLRKDT 594
QP+G+ E+ + NI+ A + + + G+ +G VL+ G+G + KDT
Sbjct: 374 QPEGKVSENVLEGGDNIEFAEKEKDTTDSVQIESEGKVSGNVLEGGEGENIVFTEKEKDT 433
Query: 595 HSP 603
P
Sbjct: 434 ADP 436
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Frame = +1
Query: 406 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALVY 513
GSP+ +G + E+D D + NI+H + +H + A++Y
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At4g12500.1 68417.m01975 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 177
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/38 (44%), Positives = 19/38 (50%)
Frame = +2
Query: 506 SCTRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPAS 619
S P VP S TP+ SP P P+ TPPR P S
Sbjct: 58 SVPTPSVPTPSVPTPSVPSPNPTPV-----TPPRTPGS 90
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 30.7 bits (66), Expect = 0.93
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +2
Query: 473 PAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVPIYER--IRTPPRHP 613
P Y A+Q+ P PP + P T SP P P+Y I++PP P
Sbjct: 623 PPTYYAVQS------PPPPPPVYYPPVTASPPPPPVYYTPVIQSPPPPP 665
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +2
Query: 497 AVLSCTRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT*PV 634
+V S T PV PP TP+ SPTP P+ TP S T PV
Sbjct: 89 SVPSPTPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPSVPSPTPPV 133
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = +2
Query: 497 AVLSCTRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT*PV 634
+V S T PV PP TP+ SPTP P+ TP S T PV
Sbjct: 125 SVPSPTPPVSPPPPTPTPSVPSPTP-PVSPPPPTPTPSVPSPTPPV 169
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 497 AVLSCTRPVVPPVSCWTPATVSPTPVPIYERIRTPP 604
+V S T PV PP TP+ SPTP + + +PP
Sbjct: 143 SVPSPTPPVSPPPPTPTPSVPSPTPPVPTDPMPSPP 178
>At1g58370.1 68414.m06640 glycosyl hydrolase family 10 protein /
carbohydrate-binding domain-containing protein similar
to (1,4)-beta-xylan endohydrolase GI:5306060 from
[Triticum aestivum] ; contains Pfam profiles PF00331:
Glycosyl hydrolase family 10, PF02018: Carbohydrate
binding domain
Length = 917
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +1
Query: 424 GQQREDDPDHVRNIQHARHVRRHPSRALVYASGRTTGIVL 543
G Q E + D I + + ++PS+ALVY G ++GI L
Sbjct: 478 GGQVEINDDRWHEIGGSFRIEKNPSKALVYVQGPSSGIDL 517
>At2g10070.2 68415.m01044 expressed protein very low similarity to
AHM1 [Triticum aestivum] GI:6691467
Length = 208
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 524 VPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT*PVCD 640
+PP +TPA +P P ER+R P+ S T V D
Sbjct: 8 LPPQYNFTPADNNPPPQSSQERVRVQPQQARSFTPRVSD 46
>At2g10070.1 68415.m01045 expressed protein very low similarity to
AHM1 [Triticum aestivum] GI:6691467
Length = 150
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 524 VPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT*PVCD 640
+PP +TPA +P P ER+R P+ S T V D
Sbjct: 8 LPPQYNFTPADNNPPPQSSQERVRVQPQQARSFTPRVSD 46
>At4g12490.1 68417.m01974 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to pEARLI
1 (Accession No. L43080): an Arabidopsis member of a
conserved gene family (PGF95-099), Plant Physiol. 109
(4), 1497 (1995); contains Pfam protease inhibitor/seed
storage/LTP family domain PF00234
Length = 182
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +2
Query: 461 TFNTPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHPAS 619
T + P+ YV +V S P VP S +P+ SP P P+ PPR P S
Sbjct: 51 TPSVPSPYVPTPSVPS---PSVPTPSVPSPSVPSPNPTPV-----IPPRTPGS 95
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 524 VPPVSCWTPATVSPTPVPIYERIRTPPRHPAS 619
+PPV+ TP+ ++ PVP+ E P P +
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTSPTT 69
>At1g09460.1 68414.m01058 glucan endo-1,3-beta-glucosidase-related
similar to glucan endo-1,3-beta-glucosidase precursor
SP:P52409 from [Triticum aestivum]
Length = 330
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 512 TRPVVPPVSCWTPATVSPTPV-PIYERIRTPP 604
T P+VPPV+ P T++P PV I TPP
Sbjct: 62 TVPIVPPVTTIPPPTLTPPPVITIPPPTLTPP 93
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/47 (29%), Positives = 19/47 (40%)
Frame = +2
Query: 473 PAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVPIYERIRTPPRHP 613
PA + L+ P PP ++P P P P+Y PP P
Sbjct: 413 PAPIFSTPPTLTSPPPPSPPPPVYSPPPPPPPPPPVYSPPPPPPPPP 459
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +2
Query: 518 PVVPPVSCWTPATVSPTPVPIYERIRTPPRHPASXT*P 631
P PPV P SP P P+Y R PP P S P
Sbjct: 512 PPPPPVYSSPPPPPSPAPTPVY-CTRPPPPPPHSPPPP 548
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 509 CTRPVVPPVSCWTPATVSPTPVPIYERIRTPPRH 610
CTRP PP P SP P Y PP H
Sbjct: 534 CTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPH 567
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 470 TPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPT-PVPIYERIRTPP 604
TP +Y + T+P +PP +TP PT P+Y + PP
Sbjct: 72 TPPVYKHTPSPPVYTKPTIPP-PVYTPPVYKPTLSPPVYTKPTIPP 116
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 470 TPAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVP-IYERIRTPP 604
TP +Y + T+P +PP +TP TP P +Y + PP
Sbjct: 48 TPPVYKPTLSPPVYTKPTIPP-PVYTPPVYKHTPSPPVYTKPTIPP 92
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/55 (38%), Positives = 24/55 (43%)
Frame = +2
Query: 104 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDGHRAK 268
ALV +C FAGD A AV SI G G+ G K S+ G AK
Sbjct: 37 ALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGFKGSFADAGQSAK 89
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/87 (24%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Frame = +2
Query: 377 PEEHPVLLTEAPLNPKANRE--KMTQIMFETFNTPAMYVAIQAVLSCTRPVVPPVSCWTP 550
P P + P+ P + K+ + T+ P V +V T PP P
Sbjct: 76 PPVKPPTIPVTPVKPPVSTPPIKLPPVQPPTYKPPTPTVKPPSVQPPTYK--PPTPTVKP 133
Query: 551 ATVSPTPVPIYERIRTPPRHPASXT*P 631
T SP P +++PP P + P
Sbjct: 134 PTTSPVKPPTTPPVQSPPVQPPTYKPP 160
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 204 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 82
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g05290.1 68415.m00557 expressed protein similar to zinc finger
protein [Arabidopsis thaliana] GI:976277
Length = 383
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -3
Query: 308 IPCSMGYLRVRIPLLLCAHLLHKSPSVPYRPS 213
+ + Y R+R C L H+ P PY PS
Sbjct: 193 VKIGIDYERIRKRCFQCQRLTHEKPRCPYLPS 224
>At1g75080.2 68414.m08720 brassinosteroid signalling positive
regulator (BZR1) identical to to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 336
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 473 PAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVPIYERI 592
P+ +++ SC PV PPVS +P + +P P+P +E I
Sbjct: 162 PSSLPSLRISNSC--PVTPPVS--SPTSKNPKPLPNWESI 197
>At1g75080.1 68414.m08719 brassinosteroid signalling positive
regulator (BZR1) identical to to BZR1 protein
[Arabidopsis thaliana] gi|20270971|gb|AAM18490
Length = 336
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +2
Query: 473 PAMYVAIQAVLSCTRPVVPPVSCWTPATVSPTPVPIYERI 592
P+ +++ SC PV PPVS +P + +P P+P +E I
Sbjct: 162 PSSLPSLRISNSC--PVTPPVS--SPTSKNPKPLPNWESI 197
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,368,015
Number of Sequences: 28952
Number of extensions: 441033
Number of successful extensions: 1540
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1474
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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