Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1324
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   1.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.7  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/37 (24%), Positives = 22/37 (59%)
 Frame = -1

Query: 513 LTPTWC*VVTGNHRHLQRKCHHYLRYEF*GLSIVTTS 403
           L+P  C +V  N  H+++   + L +++ G  ++T++
Sbjct: 90  LSPEDCELVLSNPTHMEKSAIYNLLHDWLGTGLLTST 126


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/37 (24%), Positives = 22/37 (59%)
 Frame = -1

Query: 513 LTPTWC*VVTGNHRHLQRKCHHYLRYEF*GLSIVTTS 403
           L+P  C +V  N  H+++   + L +++ G  ++T++
Sbjct: 90  LSPEDCELVLSNPTHMEKSAIYNLLHDWLGTGLLTST 126


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 283 GLIFIIRCYSSPWKSIVNIC*VRISLEKLVP 191
           GL F I   +  WK+ VN C V     K++P
Sbjct: 77  GLAFDIERQTCDWKTKVNNCDVIEKPRKVLP 107


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 287 CGFDFYYTMLFFTVEV 240
           C + FYY  + FTV +
Sbjct: 112 CVYYFYYAFIIFTVHL 127



 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 287 CGFDFYYTMLFFTVEV 240
           C + FYY  + FTV +
Sbjct: 237 CIYYFYYAFILFTVHL 252


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 468 LQRKCHHYLRYE 433
           +QRKC+H L Y+
Sbjct: 471 IQRKCNHGLVYD 482


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,049
Number of Sequences: 336
Number of extensions: 3199
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)