BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1324 (702 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 27 2.6 SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces pom... 26 4.5 SPAC23A1.14c |||cystathionine gamma-synthase |Schizosaccharomyce... 25 7.9 >SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosaccharomyces pombe|chr 1|||Manual Length = 859 Score = 27.1 bits (57), Expect = 2.6 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = +2 Query: 266 YNKNQTRKIIVCAITGGRTSCESARVKYL 352 + K+ +K++VC I+ GRT + YL Sbjct: 227 WGKDAWKKVVVCIISDGRTKIHPRTLAYL 255 >SPCC794.06 |||TDT malic acid transporter|Schizosaccharomyces pombe|chr 3|||Manual Length = 431 Score = 26.2 bits (55), Expect = 4.5 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = -2 Query: 107 KNIFLYTLSRLDVCMCVLTNRFVR 36 K IF++ LS L + +C +T RF+R Sbjct: 63 KIIFIFQLSILTLYICCITFRFIR 86 >SPAC23A1.14c |||cystathionine gamma-synthase |Schizosaccharomyces pombe|chr 1|||Manual Length = 398 Score = 25.4 bits (53), Expect = 7.9 Identities = 10/27 (37%), Positives = 16/27 (59%) Frame = +2 Query: 266 YNKNQTRKIIVCAITGGRTSCESARVK 346 +N QT++ + +TGG SC S +K Sbjct: 305 HNSLQTKEFVAKNLTGGHASCFSVLLK 331 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,737,433 Number of Sequences: 5004 Number of extensions: 54391 Number of successful extensions: 122 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 122 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 325165428 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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