Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1322
         (431 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   0.94 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.2  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    22   2.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   2.9  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    20   8.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 0.94
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +3

Query: 276 YIYMIQTISIHDFAKAGLVIRVCKRNNH 359
           YI  +   +IH+ +KAG +I   + N+H
Sbjct: 648 YICHVCCSTIHEVSKAGELIHKIETNDH 675


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 72  NASRLFSHLKLLASTYRYN 128
           N S L SH+K  ++ YRY+
Sbjct: 270 NKSMLNSHMKSHSNVYRYS 288


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 72  NASRLFSHLKLLASTYRYN 128
           N S L SH+K  ++ YRY+
Sbjct: 28  NKSMLNSHMKSHSNVYRYS 46


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 294 FVSYKCKVLFIPLRPLILT*YFFPYSHIIF 205
           F+ +   +LF  +  ++L  Y+F Y+ I+F
Sbjct: 219 FIIFTIHLLFYCVLIILLCIYYFYYAFILF 248



 Score = 21.4 bits (43), Expect = 3.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 285 YKCKVLFIPLRPLILT*YFFPYSHIIF 205
           Y   +LF     L++  Y+F Y H++F
Sbjct: 242 YYAFILFTVHLLLLVCIYYFYYMHLLF 268


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 68  IVYSRISLVNFYDEISN 18
           I+YS + ++N+ DE+ N
Sbjct: 220 ILYSSLMVLNYIDEVFN 236


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 164 NNFYGICSMQYLIVSV 117
           NN YG+  ++ +IV +
Sbjct: 237 NNIYGLAMLEIIIVVI 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,597
Number of Sequences: 336
Number of extensions: 2371
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)