Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1321
         (291 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I449 Cluster: Putative uncharacterized protein PFE026...    33   1.6  
UniRef50_A5AET3 Cluster: Putative uncharacterized protein; n=2; ...    32   2.8  
UniRef50_Q86KD2 Cluster: Similar to Dictyostelium discoideum (Sl...    32   2.8  
UniRef50_Q17L49 Cluster: Putative uncharacterized protein; n=1; ...    32   2.8  
UniRef50_Q1E641 Cluster: Putative uncharacterized protein; n=1; ...    31   4.9  
UniRef50_UPI0000F2C922 Cluster: PREDICTED: similar to TIR domain...    30   8.5  
UniRef50_Q13PF6 Cluster: Oxidoreductase, molybdopterin-binding s...    30   8.5  
UniRef50_Q07807 Cluster: Protein PUF3; n=2; Saccharomyces cerevi...    30   8.5  

>UniRef50_Q8I449 Cluster: Putative uncharacterized protein PFE0260w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE0260w - Plasmodium falciparum
           (isolate 3D7)
          Length = 611

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +2

Query: 107 FFNIYANQWQNYYQPKH*SQKTYKFLQN 190
           ++NIY+N + N+Y+  H  QK YK+L N
Sbjct: 368 YYNIYSNIYYNFYE--HRKQKIYKYLMN 393


>UniRef50_A5AET3 Cluster: Putative uncharacterized protein; n=2; Vitis
            vinifera|Rep: Putative uncharacterized protein - Vitis
            vinifera (Grape)
          Length = 1108

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +1

Query: 85   HLQHQCHILQYLRQSMAKLLSTQALKSEDV*IFTKQSNRLLYTKRFPTT 231
            H++  C ILQYL++S  + L  +   S +V +FTK       T R  TT
Sbjct: 921  HMKAVCRILQYLKKSPGRGLHFKKTSSREVEVFTKADWAGSLTYRRSTT 969


>UniRef50_Q86KD2 Cluster: Similar to Dictyostelium discoideum (Slime
           mold). MkpA protein; n=2; Dictyostelium discoideum|Rep:
           Similar to Dictyostelium discoideum (Slime mold). MkpA
           protein - Dictyostelium discoideum (Slime mold)
          Length = 827

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = +3

Query: 33  ILCYLAVARASIIDTDYPPAASVSYSSISTPINGKTIINP-STEVRRRINFYKTVEPAPV 209
           IL   + +  + I T      S   S  S P++G ++INP +T  +   +F++ V P  +
Sbjct: 442 ILSLFSKSSITPIQTSSISLPSPGISPFSNPLDGSSLINPETTPSQSSSSFFRPVSPTSI 501

Query: 210 HETFSDHNNAGNAYFHRSTN 269
               +++ N+     + + N
Sbjct: 502 SSLENNNTNSNTTVNNNNNN 521


>UniRef50_Q17L49 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 634

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
 Frame = +3

Query: 63  SIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRRINF--YKT 191
           S++D D+P   +V  ++   PI+G++   P   +R++IN+  YKT
Sbjct: 385 SVVDDDHPEVEAVQPTA---PIDGRSETKPEAAIRKKINYRRYKT 426


>UniRef50_Q1E641 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 457

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 11/83 (13%)
 Frame = +3

Query: 75  TDYPPAASVSYSSISTPINGKTIINPS---TEVR--------RRINFYKTVEPAPVHETF 221
           TD     + S ++ STP NGK +++PS   T+V          R+  + T  P P+ E F
Sbjct: 280 TDIEREIAHSKAAASTPNNGKPVVDPSKLFTQVNPFSPDTSSNRVRRHITPRPLPLREKF 339

Query: 222 SDHNNAGNAYFHRSTNKTLIXTT 290
              ++  N+  H     T   TT
Sbjct: 340 HTIHSLRNSPCHDGPTATTATTT 362


>UniRef50_UPI0000F2C922 Cluster: PREDICTED: similar to TIR
           domain-containing adapter inducing IFN-beta; n=1;
           Monodelphis domestica|Rep: PREDICTED: similar to TIR
           domain-containing adapter inducing IFN-beta -
           Monodelphis domestica
          Length = 702

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 15/48 (31%), Positives = 29/48 (60%)
 Frame = +3

Query: 60  ASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRRINFYKTVEPA 203
           AS++    PP  S+S   I TP++ +T ++ STE    ++  ++++PA
Sbjct: 283 ASVVSDPQPPNPSISPPLI-TPVDPETSLHSSTECSEALSDTQSLQPA 329


>UniRef50_Q13PF6 Cluster: Oxidoreductase, molybdopterin-binding
           subunit; n=1; Burkholderia xenovorans LB400|Rep:
           Oxidoreductase, molybdopterin-binding subunit -
           Burkholderia xenovorans (strain LB400)
          Length = 329

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 51  VARASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRRINFYK 188
           +AR SI+ TDYP  +    +  ST +  K     +   R R N+++
Sbjct: 36  LARHSIVRTDYPVLSQALLAGASTQLRNKATTGGNVMQRVRCNYFR 81


>UniRef50_Q07807 Cluster: Protein PUF3; n=2; Saccharomyces
           cerevisiae|Rep: Protein PUF3 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 879

 Score = 30.3 bits (65), Expect = 8.5
 Identities = 19/72 (26%), Positives = 31/72 (43%)
 Frame = +3

Query: 75  TDYPPAASVSYSSISTPINGKTIINPSTEVRRRINFYKTVEPAPVHETFSDHNNAGNAYF 254
           TD    +S SY++  T      +   + +V   +  Y      PV+   +D+NN+G   F
Sbjct: 113 TDTASLSSASYNNYHTHHTAANL-GKNNKVNHLLGQYSASIAGPVYYNGNDNNNSGGEGF 171

Query: 255 HRSTNKTLIXTT 290
                K+LI  T
Sbjct: 172 FEKFGKSLIDGT 183


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 276,631,469
Number of Sequences: 1657284
Number of extensions: 4613527
Number of successful extensions: 13801
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13796
length of database: 575,637,011
effective HSP length: 74
effective length of database: 452,997,995
effective search space used: 9965955890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)