Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1321
         (291 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    23   0.66 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   2.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   3.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       20   4.7  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   6.2  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 0.66
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 212 VYRSRFDCFVKIYTSSDFSAWV 147
           V  S F+ FVK Y  SDF  +V
Sbjct: 29  VEESGFENFVKTYLVSDFENYV 50


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 2.0
 Identities = 13/49 (26%), Positives = 19/49 (38%)
 Frame = +3

Query: 87  PAASVSYSSISTPINGKTIINPSTEVRRRINFYKTVEPAPVHETFSDHN 233
           P+A  S    +TP  G+ +   ST   +R     T E  P     +  N
Sbjct: 419 PSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTTEAPPAPAVSNPQN 467


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 3.5
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 267 LWSDESKHFQHYCGRK 220
           +WS E+     +CG K
Sbjct: 349 IWSIETDDMHEFCGEK 364


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 20.2 bits (40), Expect = 4.7
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +3

Query: 204 PVHETFSDHNNAGNAYFHRSTNKTLI 281
           P+H+T   HNN  +    RS + + +
Sbjct: 45  PIHQTVIYHNNPRDPNRARSVSYSTV 70


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 19.8 bits (39), Expect = 6.2
 Identities = 5/25 (20%), Positives = 14/25 (56%)
 Frame = -1

Query: 267 LWSDESKHFQHYCGRKTFRVQEPVR 193
           +WS ++  F+  CG+  + +   ++
Sbjct: 355 VWSLDTDDFRGICGKGPYPIMNAIK 379


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,672
Number of Sequences: 336
Number of extensions: 1371
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  5109936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)