BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1321 (291 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT011438-1|AAR99096.1| 474|Drosophila melanogaster RE74613p pro... 28 1.7 AY089292-1|AAL90030.1| 915|Drosophila melanogaster AT08673p pro... 28 1.7 AY061346-1|AAL28894.1| 474|Drosophila melanogaster LD27791p pro... 28 1.7 AE014134-2543|ABI31318.1| 363|Drosophila melanogaster CG4482-PE... 28 1.7 AE014134-2542|AAF53424.1| 363|Drosophila melanogaster CG4482-PB... 28 1.7 AE014134-2541|ABI31316.1| 474|Drosophila melanogaster CG4482-PD... 28 1.7 AE014134-2540|ABI31317.1| 474|Drosophila melanogaster CG4482-PC... 28 1.7 AE014134-2539|AAF53425.2| 474|Drosophila melanogaster CG4482-PA... 28 1.7 AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-P... 28 1.7 AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P... 27 5.1 AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB... 26 6.8 AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA... 26 6.8 AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin... 26 9.0 AY070951-1|AAL48573.1| 208|Drosophila melanogaster RE04882p pro... 26 9.0 AE014297-499|AAF54094.1| 208|Drosophila melanogaster CG1330-PA ... 26 9.0 AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ... 26 9.0 AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ... 26 9.0 AE001572-17|AAD19807.1| 208|Drosophila melanogaster cuticle pro... 26 9.0 >BT011438-1|AAR99096.1| 474|Drosophila melanogaster RE74613p protein. Length = 474 Score = 28.3 bits (60), Expect = 1.7 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 33 ILCYLAVARASIIDTDYPPA-ASVSYSSISTPINGKTIINPSTEVRRR 173 ILC++A SIID +P ++V TP + I+ S++VR R Sbjct: 265 ILCFIAGVLISIIDLVWPHTFSTVLEVYYGTPYDRHVILEESSDVRYR 312 >AY089292-1|AAL90030.1| 915|Drosophila melanogaster AT08673p protein. Length = 915 Score = 28.3 bits (60), Expect = 1.7 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +3 Query: 84 PPAASVSYSSISTPINGKTIINPSTEVRRRINFYKTVEPAPVHETFSDH 230 PPAA V SI G++ + T V++ + TVE A V + +H Sbjct: 835 PPAAKVEVPSIRNTSPGQSPVRSPTIVKQELYETDTVESAGVEDEPENH 883 >AY061346-1|AAL28894.1| 474|Drosophila melanogaster LD27791p protein. Length = 474 Score = 28.3 bits (60), Expect = 1.7 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 33 ILCYLAVARASIIDTDYPPA-ASVSYSSISTPINGKTIINPSTEVRRR 173 ILC++A SIID +P ++V TP + I+ S++VR R Sbjct: 265 ILCFIAGVLISIIDLVWPHTFSTVLEVYYGTPYDRHVILEESSDVRYR 312 >AE014134-2543|ABI31318.1| 363|Drosophila melanogaster CG4482-PE, isoform E protein. Length = 363 Score = 28.3 bits (60), Expect = 1.7 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 33 ILCYLAVARASIIDTDYPPA-ASVSYSSISTPINGKTIINPSTEVRRR 173 ILC++A SIID +P ++V TP + I+ S++VR R Sbjct: 154 ILCFIAGVLISIIDLVWPHTFSTVLEVYYGTPYDRHVILEESSDVRYR 201 >AE014134-2542|AAF53424.1| 363|Drosophila melanogaster CG4482-PB, isoform B protein. Length = 363 Score = 28.3 bits (60), Expect = 1.7 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 33 ILCYLAVARASIIDTDYPPA-ASVSYSSISTPINGKTIINPSTEVRRR 173 ILC++A SIID +P ++V TP + I+ S++VR R Sbjct: 154 ILCFIAGVLISIIDLVWPHTFSTVLEVYYGTPYDRHVILEESSDVRYR 201 >AE014134-2541|ABI31316.1| 474|Drosophila melanogaster CG4482-PD, isoform D protein. Length = 474 Score = 28.3 bits (60), Expect = 1.7 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 33 ILCYLAVARASIIDTDYPPA-ASVSYSSISTPINGKTIINPSTEVRRR 173 ILC++A SIID +P ++V TP + I+ S++VR R Sbjct: 265 ILCFIAGVLISIIDLVWPHTFSTVLEVYYGTPYDRHVILEESSDVRYR 312 >AE014134-2540|ABI31317.1| 474|Drosophila melanogaster CG4482-PC, isoform C protein. Length = 474 Score = 28.3 bits (60), Expect = 1.7 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 33 ILCYLAVARASIIDTDYPPA-ASVSYSSISTPINGKTIINPSTEVRRR 173 ILC++A SIID +P ++V TP + I+ S++VR R Sbjct: 265 ILCFIAGVLISIIDLVWPHTFSTVLEVYYGTPYDRHVILEESSDVRYR 312 >AE014134-2539|AAF53425.2| 474|Drosophila melanogaster CG4482-PA, isoform A protein. Length = 474 Score = 28.3 bits (60), Expect = 1.7 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 33 ILCYLAVARASIIDTDYPPA-ASVSYSSISTPINGKTIINPSTEVRRR 173 ILC++A SIID +P ++V TP + I+ S++VR R Sbjct: 265 ILCFIAGVLISIIDLVWPHTFSTVLEVYYGTPYDRHVILEESSDVRYR 312 >AE013599-1898|AAF58242.1| 1290|Drosophila melanogaster CG17390-PA protein. Length = 1290 Score = 28.3 bits (60), Expect = 1.7 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +3 Query: 84 PPAASVSYSSISTPINGKTIINPSTEVRRRINFYKTVEPAPVHETFSDH 230 PPAA V SI G++ + T V++ + TVE A V + +H Sbjct: 1210 PPAAKVEVPSIRNTSPGQSPVRSPTIVKQELYETDTVESAGVEDEPENH 1258 >AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA protein. Length = 2938 Score = 26.6 bits (56), Expect = 5.1 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 7/63 (11%) Frame = +3 Query: 69 IDTDYPPAAS--VSYSSISTPINGKTIINPSTEVRRRI-----NFYKTVEPAPVHETFSD 227 IDT YPP S + + +T + PS E +RI NF+++ PA VH D Sbjct: 1836 IDTIYPPRRSNGLKPNVQATAAAYPLPLLPSFEQFKRITTPITNFFRSSSPAGVHPHAHD 1895 Query: 228 HNN 236 H + Sbjct: 1896 HTS 1898 >AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB, isoform B protein. Length = 3313 Score = 26.2 bits (55), Expect = 6.8 Identities = 8/26 (30%), Positives = 18/26 (69%) Frame = +1 Query: 76 LTIHLQHQCHILQYLRQSMAKLLSTQ 153 +++H+ H C +QY +++M + L+ Q Sbjct: 1571 MSVHVCHICQFMQYSKENMDRHLTVQ 1596 >AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA, isoform A protein. Length = 3313 Score = 26.2 bits (55), Expect = 6.8 Identities = 8/26 (30%), Positives = 18/26 (69%) Frame = +1 Query: 76 LTIHLQHQCHILQYLRQSMAKLLSTQ 153 +++H+ H C +QY +++M + L+ Q Sbjct: 1571 MSVHVCHICQFMQYSKENMDRHLTVQ 1596 >AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger protein rhinoceros protein. Length = 3241 Score = 25.8 bits (54), Expect = 9.0 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +3 Query: 60 ASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRR 173 A IID + PPAA + S TP + + + +++ R Sbjct: 1679 ADIIDDERPPAAPLPASPTPTPTSNDEMSDAGSDLSER 1716 >AY070951-1|AAL48573.1| 208|Drosophila melanogaster RE04882p protein. Length = 208 Score = 25.8 bits (54), Expect = 9.0 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +3 Query: 12 MDCKIITILCYLAVARASIIDTDYPPAASVSYSSISTPINGKTI 143 M KI+ L AVA +++ T AA V+ +S P+ KT+ Sbjct: 1 MAAKIVIALALFAVAHGAVLRT----AAPVAVASAPVPVLAKTV 40 >AE014297-499|AAF54094.1| 208|Drosophila melanogaster CG1330-PA protein. Length = 208 Score = 25.8 bits (54), Expect = 9.0 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +3 Query: 12 MDCKIITILCYLAVARASIIDTDYPPAASVSYSSISTPINGKTI 143 M KI+ L AVA +++ T AA V+ +S P+ KT+ Sbjct: 1 MAAKIVIALALFAVAHGAVLRT----AAPVAVASAPVPVLAKTV 40 >AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, isoform B protein. Length = 3241 Score = 25.8 bits (54), Expect = 9.0 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +3 Query: 60 ASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRR 173 A IID + PPAA + S TP + + + +++ R Sbjct: 1679 ADIIDDERPPAAPLPASPTPTPTSNDEMSDAGSDLSER 1716 >AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, isoform A protein. Length = 3201 Score = 25.8 bits (54), Expect = 9.0 Identities = 12/38 (31%), Positives = 20/38 (52%) Frame = +3 Query: 60 ASIIDTDYPPAASVSYSSISTPINGKTIINPSTEVRRR 173 A IID + PPAA + S TP + + + +++ R Sbjct: 1639 ADIIDDERPPAAPLPASPTPTPTSNDEMSDAGSDLSER 1676 >AE001572-17|AAD19807.1| 208|Drosophila melanogaster cuticle protein protein. Length = 208 Score = 25.8 bits (54), Expect = 9.0 Identities = 15/44 (34%), Positives = 23/44 (52%) Frame = +3 Query: 12 MDCKIITILCYLAVARASIIDTDYPPAASVSYSSISTPINGKTI 143 M KI+ L AVA +++ T AA V+ +S P+ KT+ Sbjct: 1 MAAKIVIALALFAVAHGAVLRT----AAPVAVASAPVPVLAKTV 40 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,575,551 Number of Sequences: 53049 Number of extensions: 223573 Number of successful extensions: 699 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 685 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 699 length of database: 24,988,368 effective HSP length: 73 effective length of database: 21,115,791 effective search space used: 485663193 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -