Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1321
(291 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U46671-7|AAA85752.1| 194|Caenorhabditis elegans Hypothetical pr... 27 1.7
Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical pr... 26 3.9
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr... 26 3.9
AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein. 26 3.9
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein. 26 3.9
Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical pr... 26 5.2
Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr... 25 6.8
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc... 25 6.8
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc... 25 6.8
AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kin... 25 6.8
AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical ... 25 6.8
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas... 25 6.8
AF047656-12|AAC05111.1| 168|Caenorhabditis elegans Hypothetical... 25 6.8
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 25 9.1
L23647-4|AAK29991.1| 233|Caenorhabditis elegans Hypothetical pr... 25 9.1
AL137227-9|CAE17839.1| 220|Caenorhabditis elegans Hypothetical ... 25 9.1
>U46671-7|AAA85752.1| 194|Caenorhabditis elegans Hypothetical
protein C14E2.6 protein.
Length = 194
Score = 27.5 bits (58), Expect = 1.7
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +2
Query: 125 NQWQNYYQPKH*SQKTYKFLQNSRTGSCTRNVFRPQ*CWKCLLSSLHKQNLDXYN 289
N ++ YY PKH + Y+ + T SC + + WK + S + +++ +N
Sbjct: 138 NTFEIYY-PKHMTTDNYRICDQAETESCLKGSW-----WKTMFSHIFMFDMNFFN 186
>Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical
protein F54B11.3b protein.
Length = 879
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 193 SNRLLYTKRFPTTIMLEMLTFI 258
S +LLY RFP ++L ++T+I
Sbjct: 113 SRQLLYILRFPVYLVLHVITYI 134
>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical
protein F54B11.3a protein.
Length = 1111
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 193 SNRLLYTKRFPTTIMLEMLTFI 258
S +LLY RFP ++L ++T+I
Sbjct: 113 SRQLLYILRFPVYLVLHVITYI 134
>AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein.
Length = 879
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 193 SNRLLYTKRFPTTIMLEMLTFI 258
S +LLY RFP ++L ++T+I
Sbjct: 113 SRQLLYILRFPVYLVLHVITYI 134
>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
Length = 1111
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 193 SNRLLYTKRFPTTIMLEMLTFI 258
S +LLY RFP ++L ++T+I
Sbjct: 113 SRQLLYILRFPVYLVLHVITYI 134
>Z77135-2|CAB00879.1| 769|Caenorhabditis elegans Hypothetical
protein T16A9.4 protein.
Length = 769
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 104 IFFNIYANQWQNYYQPKH 157
+FF YAN W + +PKH
Sbjct: 704 MFFLAYANNWCSLVRPKH 721
>Z69885-5|CAA93756.2| 882|Caenorhabditis elegans Hypothetical
protein T04C10.1 protein.
Length = 882
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 125 NQWQNYYQPKH*SQKTYKFLQNSRTGSCTRNVFRPQ 232
N+W+N ++ Q+ + + +S + +RN F PQ
Sbjct: 821 NEWRNQFELDDTFQQKQRKVDDSVSNQISRNQFNPQ 856
>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical
protein W09C2.3c protein.
Length = 1249
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
W DE +Q++ G +Q+PVR
Sbjct: 686 WDDEDAMYQNFTGIAICGIQDPVR 709
>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical
protein W09C2.3b protein.
Length = 1228
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
W DE +Q++ G +Q+PVR
Sbjct: 665 WDDEDAMYQNFTGIAICGIQDPVR 688
>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical
protein W09C2.3a protein.
Length = 1252
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
W DE +Q++ G +Q+PVR
Sbjct: 689 WDDEDAMYQNFTGIAICGIQDPVR 712
>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
ATPase (136.9kD) (mca-1) protein.
Length = 1249
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
W DE +Q++ G +Q+PVR
Sbjct: 686 WDDEDAMYQNFTGIAICGIQDPVR 709
>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
ATPase (136.6kD) (mca-1) protein.
Length = 1252
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
W DE +Q++ G +Q+PVR
Sbjct: 689 WDDEDAMYQNFTGIAICGIQDPVR 712
>AY064464-1|AAL40874.1| 882|Caenorhabditis elegans minibrain kinase
protein.
Length = 882
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = +2
Query: 125 NQWQNYYQPKH*SQKTYKFLQNSRTGSCTRNVFRPQ 232
N+W+N ++ Q+ + + +S + +RN F PQ
Sbjct: 821 NEWRNQFELDDTFQQKQRKVDDSVSNQISRNQFNPQ 856
>AL132943-6|CAC14393.1| 511|Caenorhabditis elegans Hypothetical
protein Y116F11B.11 protein.
Length = 511
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 81 YPPAASVSYSSISTPINGKTIINPSTEVRRRINFYKTVEPA 203
Y S +S++ NG +I P ++ + INF+KT A
Sbjct: 75 YAGFKSEPITSVTFLSNGTSIFKPLQKMLKLINFWKTFSEA 115
>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
protein.
Length = 1228
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -1
Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
W DE +Q++ G +Q+PVR
Sbjct: 665 WDDEDAMYQNFTGIAICGIQDPVR 688
>AF047656-12|AAC05111.1| 168|Caenorhabditis elegans Hypothetical
protein F17E9.2 protein.
Length = 168
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 107 FFNIYANQWQNYYQPKH*SQKTYKFLQNSRTGSC 208
FF ++ ++Q Y+ QK YKF+ NSR C
Sbjct: 127 FFVFHSVKFQRYFL-----QKGYKFINNSRMRCC 155
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 25.0 bits (52), Expect = 9.1
Identities = 15/70 (21%), Positives = 30/70 (42%)
Frame = +3
Query: 72 DTDYPPAASVSYSSISTPINGKTIINPSTEVRRRINFYKTVEPAPVHETFSDHNNAGNAY 251
+T Y A S+++ ++ ++ +TE+ R K E +H + G Y
Sbjct: 232 NTHYANAGSIAFQTLGAYKTVCSLNGQNTEIERYTEELKAGEKYGIHRALMYSISRGFTY 291
Query: 252 FHRSTNKTLI 281
F ++ T+I
Sbjct: 292 FFCNSLNTVI 301
>L23647-4|AAK29991.1| 233|Caenorhabditis elegans Hypothetical
protein ZC262.2a protein.
Length = 233
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -3
Query: 232 LWSENVSCTGAGSTVL*KFIRLL 164
LWS ++ TG S+ KF+RL+
Sbjct: 159 LWSSAIAATGVDSSKANKFMRLM 181
>AL137227-9|CAE17839.1| 220|Caenorhabditis elegans Hypothetical
protein F58D5.9 protein.
Length = 220
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 18 CKIITILCYLAVARASIIDTDYP 86
C +T CY+A+ R S D+P
Sbjct: 44 CDFLTSFCYVAMERCSPSTADWP 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,640,205
Number of Sequences: 27780
Number of extensions: 121032
Number of successful extensions: 358
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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