SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1321
         (291 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46671-7|AAA85752.1|  194|Caenorhabditis elegans Hypothetical pr...    27   1.7  
Z70208-4|CAC42306.1|  879|Caenorhabditis elegans Hypothetical pr...    26   3.9  
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr...    26   3.9  
AF200707-1|AAF15884.1|  879|Caenorhabditis elegans UNC-84B protein.    26   3.9  
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.    26   3.9  
Z77135-2|CAB00879.1|  769|Caenorhabditis elegans Hypothetical pr...    26   5.2  
Z69885-5|CAA93756.2|  882|Caenorhabditis elegans Hypothetical pr...    25   6.8  
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr...    25   6.8  
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr...    25   6.8  
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr...    25   6.8  
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc...    25   6.8  
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc...    25   6.8  
AY064464-1|AAL40874.1|  882|Caenorhabditis elegans minibrain kin...    25   6.8  
AL132943-6|CAC14393.1|  511|Caenorhabditis elegans Hypothetical ...    25   6.8  
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas...    25   6.8  
AF047656-12|AAC05111.1|  168|Caenorhabditis elegans Hypothetical...    25   6.8  
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr...    25   9.1  
L23647-4|AAK29991.1|  233|Caenorhabditis elegans Hypothetical pr...    25   9.1  
AL137227-9|CAE17839.1|  220|Caenorhabditis elegans Hypothetical ...    25   9.1  

>U46671-7|AAA85752.1|  194|Caenorhabditis elegans Hypothetical
           protein C14E2.6 protein.
          Length = 194

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +2

Query: 125 NQWQNYYQPKH*SQKTYKFLQNSRTGSCTRNVFRPQ*CWKCLLSSLHKQNLDXYN 289
           N ++ YY PKH +   Y+    + T SC +  +     WK + S +   +++ +N
Sbjct: 138 NTFEIYY-PKHMTTDNYRICDQAETESCLKGSW-----WKTMFSHIFMFDMNFFN 186


>Z70208-4|CAC42306.1|  879|Caenorhabditis elegans Hypothetical
           protein F54B11.3b protein.
          Length = 879

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 193 SNRLLYTKRFPTTIMLEMLTFI 258
           S +LLY  RFP  ++L ++T+I
Sbjct: 113 SRQLLYILRFPVYLVLHVITYI 134


>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical
           protein F54B11.3a protein.
          Length = 1111

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 193 SNRLLYTKRFPTTIMLEMLTFI 258
           S +LLY  RFP  ++L ++T+I
Sbjct: 113 SRQLLYILRFPVYLVLHVITYI 134


>AF200707-1|AAF15884.1|  879|Caenorhabditis elegans UNC-84B protein.
          Length = 879

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 193 SNRLLYTKRFPTTIMLEMLTFI 258
           S +LLY  RFP  ++L ++T+I
Sbjct: 113 SRQLLYILRFPVYLVLHVITYI 134


>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
          Length = 1111

 Score = 26.2 bits (55), Expect = 3.9
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 193 SNRLLYTKRFPTTIMLEMLTFI 258
           S +LLY  RFP  ++L ++T+I
Sbjct: 113 SRQLLYILRFPVYLVLHVITYI 134


>Z77135-2|CAB00879.1|  769|Caenorhabditis elegans Hypothetical
           protein T16A9.4 protein.
          Length = 769

 Score = 25.8 bits (54), Expect = 5.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 104 IFFNIYANQWQNYYQPKH 157
           +FF  YAN W +  +PKH
Sbjct: 704 MFFLAYANNWCSLVRPKH 721


>Z69885-5|CAA93756.2|  882|Caenorhabditis elegans Hypothetical
           protein T04C10.1 protein.
          Length = 882

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 125 NQWQNYYQPKH*SQKTYKFLQNSRTGSCTRNVFRPQ 232
           N+W+N ++     Q+  + + +S +   +RN F PQ
Sbjct: 821 NEWRNQFELDDTFQQKQRKVDDSVSNQISRNQFNPQ 856


>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical
           protein W09C2.3c protein.
          Length = 1249

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
           W DE   +Q++ G     +Q+PVR
Sbjct: 686 WDDEDAMYQNFTGIAICGIQDPVR 709


>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical
           protein W09C2.3b protein.
          Length = 1228

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
           W DE   +Q++ G     +Q+PVR
Sbjct: 665 WDDEDAMYQNFTGIAICGIQDPVR 688


>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical
           protein W09C2.3a protein.
          Length = 1252

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
           W DE   +Q++ G     +Q+PVR
Sbjct: 689 WDDEDAMYQNFTGIAICGIQDPVR 712


>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
           ATPase (136.9kD) (mca-1) protein.
          Length = 1249

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
           W DE   +Q++ G     +Q+PVR
Sbjct: 686 WDDEDAMYQNFTGIAICGIQDPVR 709


>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
           ATPase (136.6kD) (mca-1) protein.
          Length = 1252

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
           W DE   +Q++ G     +Q+PVR
Sbjct: 689 WDDEDAMYQNFTGIAICGIQDPVR 712


>AY064464-1|AAL40874.1|  882|Caenorhabditis elegans minibrain kinase
           protein.
          Length = 882

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 125 NQWQNYYQPKH*SQKTYKFLQNSRTGSCTRNVFRPQ 232
           N+W+N ++     Q+  + + +S +   +RN F PQ
Sbjct: 821 NEWRNQFELDDTFQQKQRKVDDSVSNQISRNQFNPQ 856


>AL132943-6|CAC14393.1|  511|Caenorhabditis elegans Hypothetical
           protein Y116F11B.11 protein.
          Length = 511

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +3

Query: 81  YPPAASVSYSSISTPINGKTIINPSTEVRRRINFYKTVEPA 203
           Y    S   +S++   NG +I  P  ++ + INF+KT   A
Sbjct: 75  YAGFKSEPITSVTFLSNGTSIFKPLQKMLKLINFWKTFSEA 115


>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
           protein.
          Length = 1228

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 264 WSDESKHFQHYCGRKTFRVQEPVR 193
           W DE   +Q++ G     +Q+PVR
Sbjct: 665 WDDEDAMYQNFTGIAICGIQDPVR 688


>AF047656-12|AAC05111.1|  168|Caenorhabditis elegans Hypothetical
           protein F17E9.2 protein.
          Length = 168

 Score = 25.4 bits (53), Expect = 6.8
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 107 FFNIYANQWQNYYQPKH*SQKTYKFLQNSRTGSC 208
           FF  ++ ++Q Y+      QK YKF+ NSR   C
Sbjct: 127 FFVFHSVKFQRYFL-----QKGYKFINNSRMRCC 155


>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
           protein T21E8.2 protein.
          Length = 1263

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 15/70 (21%), Positives = 30/70 (42%)
 Frame = +3

Query: 72  DTDYPPAASVSYSSISTPINGKTIINPSTEVRRRINFYKTVEPAPVHETFSDHNNAGNAY 251
           +T Y  A S+++ ++       ++   +TE+ R     K  E   +H       + G  Y
Sbjct: 232 NTHYANAGSIAFQTLGAYKTVCSLNGQNTEIERYTEELKAGEKYGIHRALMYSISRGFTY 291

Query: 252 FHRSTNKTLI 281
           F  ++  T+I
Sbjct: 292 FFCNSLNTVI 301


>L23647-4|AAK29991.1|  233|Caenorhabditis elegans Hypothetical
           protein ZC262.2a protein.
          Length = 233

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 232 LWSENVSCTGAGSTVL*KFIRLL 164
           LWS  ++ TG  S+   KF+RL+
Sbjct: 159 LWSSAIAATGVDSSKANKFMRLM 181


>AL137227-9|CAE17839.1|  220|Caenorhabditis elegans Hypothetical
           protein F58D5.9 protein.
          Length = 220

 Score = 25.0 bits (52), Expect = 9.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 18  CKIITILCYLAVARASIIDTDYP 86
           C  +T  CY+A+ R S    D+P
Sbjct: 44  CDFLTSFCYVAMERCSPSTADWP 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,640,205
Number of Sequences: 27780
Number of extensions: 121032
Number of successful extensions: 358
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -