Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1321
         (291 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   1.8  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   1.8  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    20   5.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    20   7.1  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   7.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    19   9.4  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = -2

Query: 209 YRSRFDCFVKIYTSSDF-SAWVDN 141
           Y+   DCFV+I     F S W  N
Sbjct: 53  YKGMIDCFVRIPKEQGFLSYWRGN 76


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 1/24 (4%)
 Frame = -2

Query: 209 YRSRFDCFVKIYTSSDF-SAWVDN 141
           Y+   DCFV+I     F S W  N
Sbjct: 53  YKGMIDCFVRIPKEQGFLSYWRGN 76


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 244 FPALLWSENVSCTGAGS 194
           +P   W++N +C+G  S
Sbjct: 105 YPDWTWAKNENCSGITS 121


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = +1

Query: 178 IFTKQSNRLLYTKRFPTTIMLEMLTFI 258
           +F+   N+L+   RFP     E   F+
Sbjct: 154 VFSLHDNKLITMYRFPQNQFKESSLFV 180


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 244 FPALLWSENVSCTGAGS 194
           +P   W++N +C+G  S
Sbjct: 108 YPNWSWAKNQNCSGITS 124


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 5/17 (29%), Positives = 13/17 (76%)
 Frame = +3

Query: 138 TIINPSTEVRRRINFYK 188
           +I++PS++ +  + FY+
Sbjct: 244 SILDPSSDSQNEVGFYE 260


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,816
Number of Sequences: 438
Number of extensions: 1562
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)