BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1317 (316 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-76... 31 0.19 03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335,982... 28 1.3 10_06_0145 + 11215895-11216860 27 2.3 07_01_0083 - 629819-630260,631695-631838,632906-633186 27 3.1 05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-98... 27 4.1 08_02_0678 - 19971416-19971930,19971970-19973347,19974122-199745... 26 5.4 12_02_0227 - 15894357-15894494,15894587-15894655,15894837-158949... 26 7.1 07_03_1520 + 27415266-27415507,27415608-27415722,27415761-274158... 26 7.1 01_04_0090 - 15940935-15941438 26 7.1 12_01_0442 + 3495333-3496484 25 9.4 05_05_0182 - 23045837-23046026,23046112-23046306,23046852-230470... 25 9.4 02_04_0200 + 20866188-20866251,20866327-20867201 25 9.4 02_04_0003 + 18832467-18832543,18832627-18832849,18832985-188333... 25 9.4 01_01_0341 - 2734509-2735522 25 9.4 >05_01_0112 - 757514-758444,758525-758571,759074-759236,759861-760366 Length = 548 Score = 31.1 bits (67), Expect = 0.19 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 2/48 (4%) Frame = -3 Query: 290 TYGRCRSFPAPTSSGDNA--DATPSAEKPX*XRYCVYCKSYGHTRDQC 153 +YG + P+ TS G+ A D P K R C C GH +C Sbjct: 496 SYGGSSTIPSATSDGNKASDDTNPVPAKKKKRRTCYECGIAGHLASEC 543 >03_02_0609 - 9823120-9823573,9823903-9824102,9824240-9824335, 9824454-9824567,9824711-9824774,9825206-9825312 Length = 344 Score = 28.3 bits (60), Expect = 1.3 Identities = 11/23 (47%), Positives = 11/23 (47%) Frame = -3 Query: 83 KCYGCGASGVIRSNCSKCSSNFS 15 KCY CG G I NC N S Sbjct: 172 KCYRCGERGHIERNCQNSPRNLS 194 >10_06_0145 + 11215895-11216860 Length = 321 Score = 27.5 bits (58), Expect = 2.3 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = -3 Query: 272 SFPAPTSSGDNADATPSAEKP 210 S P+PTSS A ATP A +P Sbjct: 260 SSPSPTSSNQAATATPPAPRP 280 >07_01_0083 - 629819-630260,631695-631838,632906-633186 Length = 288 Score = 27.1 bits (57), Expect = 3.1 Identities = 12/20 (60%), Positives = 13/20 (65%) Frame = +1 Query: 211 GFSADGVASALSPDDVGAGK 270 G SADG AS+ S DD GK Sbjct: 66 GSSADGAASSCSTDDADGGK 85 >05_01_0148 - 985745-986180,986290-986385,986498-986694,986824-986919, 987020-987059,987751-987857 Length = 323 Score = 26.6 bits (56), Expect = 4.1 Identities = 10/21 (47%), Positives = 10/21 (47%) Frame = -3 Query: 83 KCYGCGASGVIRSNCSKCSSN 21 KCY CG G I NC N Sbjct: 125 KCYRCGERGHIERNCQNSPRN 145 >08_02_0678 - 19971416-19971930,19971970-19973347,19974122-19974518, 19974533-19974645,19977436-19977903,19977935-19978059, 19978192-19978452,19984254-19984647 Length = 1216 Score = 26.2 bits (55), Expect = 5.4 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -3 Query: 227 PSAEKPX*XRYCVYCKSYGHTRDQCR 150 PSAE+ RYC + S HT + C+ Sbjct: 924 PSAEELGKKRYCKWHNSGSHTTNDCK 949 >12_02_0227 - 15894357-15894494,15894587-15894655,15894837-15894902, 15895130-15895219,15895312-15895408,15896449-15896771 Length = 260 Score = 25.8 bits (54), Expect = 7.1 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -3 Query: 83 KCYGCGASGVIRSNCSKCSS 24 +C+ CGASG S C C S Sbjct: 74 ECWSCGASGAFLS-CGSCGS 92 >07_03_1520 + 27415266-27415507,27415608-27415722,27415761-27415815, 27415862-27417849,27418161-27418589 Length = 942 Score = 25.8 bits (54), Expect = 7.1 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -3 Query: 311 PARIAACTYGRCRSFPAP 258 PA +AA T RC++ PAP Sbjct: 4 PAAVAAATGRRCKAAPAP 21 >01_04_0090 - 15940935-15941438 Length = 167 Score = 25.8 bits (54), Expect = 7.1 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +3 Query: 258 WRGETSTAAVGTRCDAGRG 314 WR T+ RCDA RG Sbjct: 130 WRDSTNVGCARVRCDANRG 148 >12_01_0442 + 3495333-3496484 Length = 383 Score = 25.4 bits (53), Expect = 9.4 Identities = 9/25 (36%), Positives = 15/25 (60%) Frame = -1 Query: 316 PPRPASQRVPTAAVEVSPRQRRQAI 242 PP+PAS + T A P+++R + Sbjct: 225 PPQPASPKTKTKAKAKKPKRKRSCV 249 >05_05_0182 - 23045837-23046026,23046112-23046306,23046852-23047094, 23047456-23047496,23047703-23047813,23047965-23048216, 23048508-23048657,23048760-23048778,23049129-23049688 Length = 586 Score = 25.4 bits (53), Expect = 9.4 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = +1 Query: 13 ALKFELHLEQLERMTPLAPQP 75 AL+ H+E ER P+AP+P Sbjct: 166 ALRSRRHMEHRERHCPVAPRP 186 >02_04_0200 + 20866188-20866251,20866327-20867201 Length = 312 Score = 25.4 bits (53), Expect = 9.4 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = -3 Query: 200 RYCVYCKSYGHTRDQC 153 R C +CK GH D C Sbjct: 223 RICSHCKKVGHISDDC 238 >02_04_0003 + 18832467-18832543,18832627-18832849,18832985-18833375, 18833766-18834223,18834320-18834607,18834679-18835398 Length = 718 Score = 25.4 bits (53), Expect = 9.4 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -3 Query: 200 RYCVYCKSYGHTRDQC 153 RYC C +GH R+ C Sbjct: 693 RYCKLCGGHGHYRNTC 708 >01_01_0341 - 2734509-2735522 Length = 337 Score = 25.4 bits (53), Expect = 9.4 Identities = 8/16 (50%), Positives = 9/16 (56%) Frame = -3 Query: 200 RYCVYCKSYGHTRDQC 153 R C +CK GH D C Sbjct: 248 RICSHCKKVGHISDDC 263 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 6,434,452 Number of Sequences: 37544 Number of extensions: 88285 Number of successful extensions: 428 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 407 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 428 length of database: 14,793,348 effective HSP length: 72 effective length of database: 12,090,180 effective search space used: 386885760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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