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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1317
         (316 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021176-1|AAH21176.1|  166|Homo sapiens zinc finger, CCHC domai...    31   0.54 
U19765-1|AAA91782.1|  177|Homo sapiens nucleic acid binding prot...    31   0.71 
M28372-1|AAA61975.1|  177|Homo sapiens SRE-binding protein protein.    31   0.71 
DQ092367-1|AAY96755.1|  172|Homo sapiens cellular nucleic acid b...    31   0.71 
DQ092366-1|AAY96754.1|  171|Homo sapiens cellular nucleic acid b...    31   0.71 
DQ091187-1|AAY89856.1|  178|Homo sapiens cellular nucleic acid b...    31   0.71 
BT019613-1|AAV38419.1|  178|Homo sapiens zinc finger protein 9 (...    31   0.71 
BC093058-1|AAH93058.1|  177|Homo sapiens CCHC-type zinc finger, ...    31   0.71 
BC014911-1|AAH14911.1|  170|Homo sapiens CNBP protein protein.         31   0.71 
BC000288-1|AAH00288.1|  170|Homo sapiens CNBP protein protein.         31   0.71 
AY436367-1|AAR11855.1|   54|Homo sapiens cellular nucleic acid b...    31   0.71 
AY329622-1|AAR89462.1|  177|Homo sapiens zinc finger protein 9 p...    31   0.71 
AK054592-1|BAB70769.1|  167|Homo sapiens protein ( Homo sapiens ...    31   0.71 
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.            27   8.8  

>BC021176-1|AAH21176.1|  166|Homo sapiens zinc finger, CCHC domain
           containing 13 protein.
          Length = 166

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
 Frame = -3

Query: 200 RYCVYCKSYGHTRDQC-RTLLLKQTAXXXXXXXXXXXXNIKCYGCGASGVIRSNCSK 33
           ++C  C   GH    C R    K  +             +KCY CG  G +  NCSK
Sbjct: 89  QHCYTCGRLGHLARDCDRQKEQKCYSCGKLGHIQKDCAQVKCYRCGEIGHVAINCSK 145


>U19765-1|AAA91782.1|  177|Homo sapiens nucleic acid binding protein
           protein.
          Length = 177

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86  IKCYGCGASGVIRSNCSKCS 27
           +KCY CG +G +  NCSK S
Sbjct: 135 VKCYRCGETGHVAINCSKTS 154


>M28372-1|AAA61975.1|  177|Homo sapiens SRE-binding protein protein.
          Length = 177

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86  IKCYGCGASGVIRSNCSKCS 27
           +KCY CG +G +  NCSK S
Sbjct: 135 VKCYRCGETGHVAINCSKTS 154


>DQ092367-1|AAY96755.1|  172|Homo sapiens cellular nucleic acid
           binding protein beta variant 2 protein.
          Length = 172

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86  IKCYGCGASGVIRSNCSKCS 27
           +KCY CG +G +  NCSK S
Sbjct: 130 VKCYRCGETGHVAINCSKTS 149


>DQ092366-1|AAY96754.1|  171|Homo sapiens cellular nucleic acid
           binding protein beta variant 1 protein.
          Length = 171

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86  IKCYGCGASGVIRSNCSKCS 27
           +KCY CG +G +  NCSK S
Sbjct: 129 VKCYRCGETGHVAINCSKTS 148


>DQ091187-1|AAY89856.1|  178|Homo sapiens cellular nucleic acid
           binding protein alpha variant 1 protein.
          Length = 178

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86  IKCYGCGASGVIRSNCSKCS 27
           +KCY CG +G +  NCSK S
Sbjct: 136 VKCYRCGETGHVAINCSKTS 155


>BT019613-1|AAV38419.1|  178|Homo sapiens zinc finger protein 9 (a
           cellular retroviral nucleic acid binding protein)
           protein.
          Length = 178

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86  IKCYGCGASGVIRSNCSKCS 27
           +KCY CG +G +  NCSK S
Sbjct: 136 VKCYRCGETGHVAINCSKTS 155


>BC093058-1|AAH93058.1|  177|Homo sapiens CCHC-type zinc finger,
           nucleic acid binding protein protein.
          Length = 177

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86  IKCYGCGASGVIRSNCSKCS 27
           +KCY CG +G +  NCSK S
Sbjct: 135 VKCYRCGETGHVAINCSKTS 154


>BC014911-1|AAH14911.1|  170|Homo sapiens CNBP protein protein.
          Length = 170

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86  IKCYGCGASGVIRSNCSKCS 27
           +KCY CG +G +  NCSK S
Sbjct: 128 VKCYRCGETGHVAINCSKTS 147


>BC000288-1|AAH00288.1|  170|Homo sapiens CNBP protein protein.
          Length = 170

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86  IKCYGCGASGVIRSNCSKCS 27
           +KCY CG +G +  NCSK S
Sbjct: 128 VKCYRCGETGHVAINCSKTS 147


>AY436367-1|AAR11855.1|   54|Homo sapiens cellular nucleic acid
          binding protein protein.
          Length = 54

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86 IKCYGCGASGVIRSNCSKCS 27
          +KCY CG +G +  NCSK S
Sbjct: 12 VKCYRCGETGHVAINCSKTS 31


>AY329622-1|AAR89462.1|  177|Homo sapiens zinc finger protein 9
           protein.
          Length = 177

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86  IKCYGCGASGVIRSNCSKCS 27
           +KCY CG +G +  NCSK S
Sbjct: 135 VKCYRCGETGHVAINCSKTS 154


>AK054592-1|BAB70769.1|  167|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30030 fis, clone 3NB692001339, highly similar to
           CELLULAR NUCLEIC ACID BINDING PROTEIN. ).
          Length = 167

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -3

Query: 86  IKCYGCGASGVIRSNCSKCS 27
           +KCY CG +G +  NCSK S
Sbjct: 125 VKCYRCGETGHVAINCSKTS 144


>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
          Length = 3570

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 305  RIAACTYGRCRSFPAPTSSGDNADATP 225
            R+  C YG C S PA TSS     +TP
Sbjct: 1080 RVFCCNYGHCPSTPA-TSSTATPSSTP 1105



 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 305  RIAACTYGRCRSFPAPTSSGDNADATP 225
            R+  C YG C S PA TSS     +TP
Sbjct: 1609 RVFCCNYGHCPSTPA-TSSTATPSSTP 1634



 Score = 27.5 bits (58), Expect = 8.8
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -3

Query: 305  RIAACTYGRCRSFPAPTSSGDNADATP 225
            R+  C YG C S PA TSS     +TP
Sbjct: 2307 RVFCCNYGHCPSTPA-TSSTATPSSTP 2332


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,333,409
Number of Sequences: 237096
Number of extensions: 479682
Number of successful extensions: 1333
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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