BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1317 (316 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p pro... 28 2.9 AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p pro... 28 2.9 AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA... 28 2.9 AY071600-1|AAL49222.1| 419|Drosophila melanogaster RE65123p pro... 27 5.0 AY061464-1|AAL29012.1| 254|Drosophila melanogaster LD41905p pro... 27 5.0 AE014296-3290|AAF49058.3| 419|Drosophila melanogaster CG7290-PA... 27 5.0 AE013599-1877|AAF58255.1| 182|Drosophila melanogaster CG10102-P... 27 5.0 AE013599-1876|AAF58256.1| 254|Drosophila melanogaster CG12505-P... 27 5.0 M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 27 6.7 BT022951-1|AAY55367.1| 316|Drosophila melanogaster IP11180p pro... 27 6.7 AE014297-90|AAN13316.1| 316|Drosophila melanogaster CG31525-PA ... 27 6.7 AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p pro... 26 8.8 AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule ... 26 8.8 AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC... 26 8.8 AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD... 26 8.8 AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB... 26 8.8 AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA... 26 8.8 >AY118596-1|AAM49965.1| 165|Drosophila melanogaster LD48005p protein. Length = 165 Score = 27.9 bits (59), Expect = 2.9 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -3 Query: 80 CYGCGASGVIRSNCSK 33 CYGCG SG +R C + Sbjct: 145 CYGCGKSGHLRRECDE 160 >AY075371-1|AAL68216.1| 165|Drosophila melanogaster GM14667p protein. Length = 165 Score = 27.9 bits (59), Expect = 2.9 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -3 Query: 80 CYGCGASGVIRSNCSK 33 CYGCG SG +R C + Sbjct: 145 CYGCGKSGHLRRECDE 160 >AE013599-3513|AAN16117.1| 165|Drosophila melanogaster CG3800-PA protein. Length = 165 Score = 27.9 bits (59), Expect = 2.9 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = -3 Query: 80 CYGCGASGVIRSNCSK 33 CYGCG SG +R C + Sbjct: 145 CYGCGKSGHLRRECDE 160 >AY071600-1|AAL49222.1| 419|Drosophila melanogaster RE65123p protein. Length = 419 Score = 27.1 bits (57), Expect = 5.0 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 Query: 77 YGCGASGVIRSNCSKCSSNFS 15 Y CGASG +R NC NF+ Sbjct: 110 YYCGASGAVRGNC-PAGENFN 129 >AY061464-1|AAL29012.1| 254|Drosophila melanogaster LD41905p protein. Length = 254 Score = 27.1 bits (57), Expect = 5.0 Identities = 9/15 (60%), Positives = 9/15 (60%) Frame = -3 Query: 194 CVYCKSYGHTRDQCR 150 C YC GHT D CR Sbjct: 227 CTYCSFRGHTFDNCR 241 >AE014296-3290|AAF49058.3| 419|Drosophila melanogaster CG7290-PA protein. Length = 419 Score = 27.1 bits (57), Expect = 5.0 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -3 Query: 77 YGCGASGVIRSNCSKCSSNFS 15 Y CGASG +R NC NF+ Sbjct: 110 YYCGASGAVRGNC-PAGENFN 129 >AE013599-1877|AAF58255.1| 182|Drosophila melanogaster CG10102-PA protein. Length = 182 Score = 27.1 bits (57), Expect = 5.0 Identities = 9/15 (60%), Positives = 9/15 (60%) Frame = -3 Query: 194 CVYCKSYGHTRDQCR 150 C YC GHT D CR Sbjct: 155 CTYCSFRGHTFDNCR 169 >AE013599-1876|AAF58256.1| 254|Drosophila melanogaster CG12505-PA protein. Length = 254 Score = 27.1 bits (57), Expect = 5.0 Identities = 9/15 (60%), Positives = 9/15 (60%) Frame = -3 Query: 194 CVYCKSYGHTRDQCR 150 C YC GHT D CR Sbjct: 227 CTYCSFRGHTFDNCR 241 >M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.melanogaster Fw repetitiveelement putative reverse transcriptase, complete cds,and putative binding protein, 3' end. ). Length = 122 Score = 26.6 bits (56), Expect = 6.7 Identities = 8/14 (57%), Positives = 9/14 (64%) Frame = -3 Query: 194 CVYCKSYGHTRDQC 153 C C+ YGHTR C Sbjct: 40 CTNCQEYGHTRSYC 53 >BT022951-1|AAY55367.1| 316|Drosophila melanogaster IP11180p protein. Length = 316 Score = 26.6 bits (56), Expect = 6.7 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = -3 Query: 260 PTSSGDNADATPSAEKPX*XRYCVYCKSYGHTRDQCRTLLLKQT 129 P ++ A+ TP++ P ++C KS+ H+ R LL ++ Sbjct: 141 PRNTNKGANKTPNSSVPLMSKFCEQIKSHFHSVLPTRNLLCSKS 184 >AE014297-90|AAN13316.1| 316|Drosophila melanogaster CG31525-PA protein. Length = 316 Score = 26.6 bits (56), Expect = 6.7 Identities = 12/44 (27%), Positives = 23/44 (52%) Frame = -3 Query: 260 PTSSGDNADATPSAEKPX*XRYCVYCKSYGHTRDQCRTLLLKQT 129 P ++ A+ TP++ P ++C KS+ H+ R LL ++ Sbjct: 141 PRNTNKGANKTPNSSVPLMSKFCEQIKSHFHSVLPTRNLLCSKS 184 >AY118896-1|AAM50756.1| 1689|Drosophila melanogaster LD05834p protein. Length = 1689 Score = 26.2 bits (55), Expect = 8.8 Identities = 10/41 (24%), Positives = 19/41 (46%) Frame = -3 Query: 275 RSFPAPTSSGDNADATPSAEKPX*XRYCVYCKSYGHTRDQC 153 + + P+S +N + P +YC C+ +GH +C Sbjct: 1645 QDYSTPSSESNNNEKERKLPAPR--KYCDSCEVFGHDTSEC 1683 >AF041382-1|AAB96783.1| 1690|Drosophila melanogaster microtubule binding protein D-CLIP-190 protein. Length = 1690 Score = 26.2 bits (55), Expect = 8.8 Identities = 10/41 (24%), Positives = 19/41 (46%) Frame = -3 Query: 275 RSFPAPTSSGDNADATPSAEKPX*XRYCVYCKSYGHTRDQC 153 + + P+S +N + P +YC C+ +GH +C Sbjct: 1646 QDYSTPSSESNNNEKERKLPAPR--KYCDSCEVFGHDTSEC 1684 >AE014134-2837|AAN10987.1| 1652|Drosophila melanogaster CG5020-PC, isoform C protein. Length = 1652 Score = 26.2 bits (55), Expect = 8.8 Identities = 10/41 (24%), Positives = 19/41 (46%) Frame = -3 Query: 275 RSFPAPTSSGDNADATPSAEKPX*XRYCVYCKSYGHTRDQC 153 + + P+S +N + P +YC C+ +GH +C Sbjct: 1608 QDYSTPSSESNNNEKERKLPAPR--KYCDSCEVFGHDTSEC 1646 >AE014134-2834|AAO41206.2| 1677|Drosophila melanogaster CG5020-PD, isoform D protein. Length = 1677 Score = 26.2 bits (55), Expect = 8.8 Identities = 10/41 (24%), Positives = 19/41 (46%) Frame = -3 Query: 275 RSFPAPTSSGDNADATPSAEKPX*XRYCVYCKSYGHTRDQC 153 + + P+S +N + P +YC C+ +GH +C Sbjct: 1633 QDYSTPSSESNNNEKERKLPAPR--KYCDSCEVFGHDTSEC 1671 >AE014134-2833|AAF53605.2| 1689|Drosophila melanogaster CG5020-PB, isoform B protein. Length = 1689 Score = 26.2 bits (55), Expect = 8.8 Identities = 10/41 (24%), Positives = 19/41 (46%) Frame = -3 Query: 275 RSFPAPTSSGDNADATPSAEKPX*XRYCVYCKSYGHTRDQC 153 + + P+S +N + P +YC C+ +GH +C Sbjct: 1645 QDYSTPSSESNNNEKERKLPAPR--KYCDSCEVFGHDTSEC 1683 >AE014134-2832|AAF53604.1| 1690|Drosophila melanogaster CG5020-PA, isoform A protein. Length = 1690 Score = 26.2 bits (55), Expect = 8.8 Identities = 10/41 (24%), Positives = 19/41 (46%) Frame = -3 Query: 275 RSFPAPTSSGDNADATPSAEKPX*XRYCVYCKSYGHTRDQC 153 + + P+S +N + P +YC C+ +GH +C Sbjct: 1646 QDYSTPSSESNNNEKERKLPAPR--KYCDSCEVFGHDTSEC 1684 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,648,874 Number of Sequences: 53049 Number of extensions: 148898 Number of successful extensions: 468 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 446 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 468 length of database: 24,988,368 effective HSP length: 74 effective length of database: 21,062,742 effective search space used: 631882260 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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