BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1316 (693 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q8HXJ6 Cluster: Putative uncharacterized protein; n=1; ... 40 0.058 UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|... 38 0.31 UniRef50_Q22KP6 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6 UniRef50_A4A0T9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0 UniRef50_Q9VTR5 Cluster: CG11570-PA; n=2; Sophophora|Rep: CG1157... 33 6.6 UniRef50_Q5LKU8 Cluster: Transcriptional regulator, LysR family;... 33 8.8 >UniRef50_Q8HXJ6 Cluster: Putative uncharacterized protein; n=1; Macaca fascicularis|Rep: Putative uncharacterized protein - Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey) Length = 133 Score = 39.9 bits (89), Expect = 0.058 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Frame = -2 Query: 425 CGGGEIGFISLP--VAWILFLYHFNLKLCCQLIEVGSCNCTF 306 C G++ IS+P W+L H+ LCC L+++G CNC + Sbjct: 3 CPSGDLSLISVPWHQCWMLSTRHYFNLLCCCLLKLGVCNCLY 44 >UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth) Length = 191 Score = 37.5 bits (83), Expect = 0.31 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = +2 Query: 545 RWLDELTAHQVLSGYW 592 RW+DELTAH VLSGYW Sbjct: 158 RWVDELTAHLVLSGYW 173 >UniRef50_Q22KP6 Cluster: Putative uncharacterized protein; n=1; Tetrahymena thermophila SB210|Rep: Putative uncharacterized protein - Tetrahymena thermophila SB210 Length = 686 Score = 35.1 bits (77), Expect = 1.6 Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 2/44 (4%) Frame = -2 Query: 404 FISLPVAWILFLYHFNLKLCCQLIEVGSCNCTFY--YKTDLIVK 279 F+S+P +++L Y F LKL C++I++ +C + Y YK + + K Sbjct: 467 FLSVPFSYLLVKYLFQLKLKCKVIDIKNCPESKYQQYKKNTLTK 510 >UniRef50_A4A0T9 Cluster: Putative uncharacterized protein; n=1; Blastopirellula marina DSM 3645|Rep: Putative uncharacterized protein - Blastopirellula marina DSM 3645 Length = 163 Score = 33.5 bits (73), Expect = 5.0 Identities = 17/49 (34%), Positives = 26/49 (53%) Frame = -2 Query: 692 FLAGEAVMRFGLKGGGSRCNYMGGTFML*MSIASSNHLTPGGL*ARPTI 546 F + A++ G GG RC +GGT + S+ S L+ G L + PT+ Sbjct: 82 FYSALALIGLGASNGGVRCQRVGGTAFVFGSVIYSGGLSIGALLSEPTL 130 >UniRef50_Q9VTR5 Cluster: CG11570-PA; n=2; Sophophora|Rep: CG11570-PA - Drosophila melanogaster (Fruit fly) Length = 214 Score = 33.1 bits (72), Expect = 6.6 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +3 Query: 156 YFVFKKKTTYLTEFELNLFSYRKKYICIYI*LVNLNYYIRSLNYEVGFI 302 Y+V +K Y + LNLF + Y C Y N N YI S N++V I Sbjct: 11 YYVCQKGRAYEQQCPLNLFWSQMTYRCDYKEYSNCNTYIPSPNHDVEVI 59 >UniRef50_Q5LKU8 Cluster: Transcriptional regulator, LysR family; n=4; Rhodobacteraceae|Rep: Transcriptional regulator, LysR family - Silicibacter pomeroyi Length = 294 Score = 32.7 bits (71), Expect = 8.8 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = -2 Query: 371 LYHFNLKLCCQLIEVGSCNCTFYYK 297 +Y NL+ CCQL+ G+C+ YY+ Sbjct: 124 VYSDNLRTCCQLLSDGTCDFLLYYR 148 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 662,425,742 Number of Sequences: 1657284 Number of extensions: 12978714 Number of successful extensions: 25328 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 24598 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 25318 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 54545459628 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -