Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1316
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    25   0.78 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.0  
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    24   1.4  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   3.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   3.1  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 389 VAWILFLYHFNLKLCCQLIEVG 324
           VA +LFL  F L + C ++E+G
Sbjct: 120 VAHLLFLVIFVLNIWCWIVEIG 141


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 630 YGWHIYVVDVYSF 592
           +GWH Y+ DV +F
Sbjct: 155 FGWHTYIFDVPNF 167


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 408 NLSTPTPQY*SSNVSSQAMMIKRTIQTVMDITRVFKSQFF 527
           N ST   +   S+  S A   K  ++T+M I ++ +  FF
Sbjct: 22  NFSTDWGKRSGSSAGSDANNCKEPVETIMLIYKIIQVSFF 61


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 539 IKKQKKLRLKNPCDIHDSLNCSFY 468
           + KQ     K+PCD++ +++  FY
Sbjct: 2   LPKQFLKLFKDPCDVYTAIHPLFY 25


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -2

Query: 539 IKKQKKLRLKNPCDIHDSLNCSFY 468
           + KQ     K+PCD++ +++  FY
Sbjct: 2   LPKQFLKLFKDPCDVYTAIHPLFY 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,221
Number of Sequences: 336
Number of extensions: 3580
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)