BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1315 (436 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_26629| Best HMM Match : Albicidin_res (HMM E-Value=2.9) 27 5.0 SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05) 27 5.0 SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7 >SB_26629| Best HMM Match : Albicidin_res (HMM E-Value=2.9) Length = 245 Score = 27.5 bits (58), Expect = 5.0 Identities = 9/23 (39%), Positives = 16/23 (69%) Frame = +3 Query: 240 VNNESLTLIFYNXCLXVWLSFCS 308 V ++SL ++FY+ C WLS+ + Sbjct: 2 VKSKSLAILFYHICAHGWLSYAA 24 >SB_1649| Best HMM Match : ANF_receptor (HMM E-Value=1.2e-05) Length = 481 Score = 27.5 bits (58), Expect = 5.0 Identities = 9/23 (39%), Positives = 16/23 (69%) Frame = +3 Query: 240 VNNESLTLIFYNXCLXVWLSFCS 308 V ++SL ++FY+ C WLS+ + Sbjct: 2 VKSKSLAILFYHICAHGWLSYAA 24 >SB_14128| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1138 Score = 27.1 bits (57), Expect = 6.7 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +2 Query: 41 QIKLHTYSIGIYIPKNLCFFYRXYNFFILYFGYSFXLN 154 +IK Y+I +IPKNL F + + F +YF + LN Sbjct: 40 KIKTTKYTIWSFIPKNL--FEQFHRFANIYFLFIVGLN 75 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,859,341 Number of Sequences: 59808 Number of extensions: 108600 Number of successful extensions: 240 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 183 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 240 length of database: 16,821,457 effective HSP length: 76 effective length of database: 12,276,049 effective search space used: 834771332 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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