Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1314
(463 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 145 3e-36
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 145 3e-36
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 145 3e-36
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 83 2e-17
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 76 3e-15
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 54 1e-08
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 36 0.004
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 36 0.004
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 32 0.037
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 32 0.049
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 31 0.086
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 29 0.26
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 29 0.35
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 0.80
SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1 |Schiz... 27 1.1
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 26 3.2
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 26 3.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 3.2
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 25 4.3
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 4.3
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 25 5.6
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 5.6
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 25 7.4
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 25 7.4
SPAC4D7.09 |tif223||translation initiation factor eIF2B|Schizosa... 25 7.4
SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal |Schizos... 24 9.8
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 145 bits (351), Expect = 3e-36
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVD GKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 126 bits (304), Expect = 2e-30
Identities = 58/69 (84%), Positives = 61/69 (88%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET K VT+IDAPGHRDFIKNMITGTS ADCA+LI GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 145 bits (351), Expect = 3e-36
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVD GKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 126 bits (305), Expect = 1e-30
Identities = 59/69 (85%), Positives = 61/69 (88%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET K VT+IDAPGHRDFIKNMITGTS ADCAVLI GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 145 bits (351), Expect = 3e-36
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HIN+VVIGHVD GKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVL
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 126 bits (304), Expect = 2e-30
Identities = 58/69 (84%), Positives = 61/69 (88%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET K VT+IDAPGHRDFIKNMITGTS ADCA+LI GTGEFEAGISK+G
Sbjct: 72 TIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 83.0 bits (196), Expect = 2e-17
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +1
Query: 55 KTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
K H+NIV IGHVD GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD
Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTS 295
Query: 235 AERERG 252
ERE+G
Sbjct: 296 EEREKG 301
Score = 77.8 bits (183), Expect = 8e-16
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
T+++ FET +++DAPGH+ ++ NMI G S AD VL+ +A GEFEAG + G
Sbjct: 303 TVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGG 362
Query: 435 QTREHALLA 461
QTREHA+LA
Sbjct: 363 QTREHAVLA 371
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 75.8 bits (178), Expect = 3e-15
Identities = 32/67 (47%), Positives = 46/67 (68%)
Frame = +1
Query: 55 KTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 234
K +++VV GHVD GKST G ++++ G I+ R+++K EA GKGSF YAW+LD +
Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTE 234
Query: 235 AERERGI 255
ER RG+
Sbjct: 235 EERARGV 241
Score = 74.5 bits (175), Expect = 7e-15
Identities = 36/68 (52%), Positives = 42/68 (61%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
T+D+ FE+ K I DAPGHRDFI MI G S AD AVL+ + FE G +NG
Sbjct: 242 TMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENG 301
Query: 435 QTREHALL 458
QTREHA L
Sbjct: 302 QTREHAYL 309
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 53.6 bits (123), Expect = 1e-08
Identities = 28/69 (40%), Positives = 40/69 (57%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TI ++ET+ + +D PGH D+IKNMITG + D A+++ +A G+
Sbjct: 103 TISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDGQMP------- 155
Query: 435 QTREHALLA 461
QTREH LLA
Sbjct: 156 QTREHLLLA 164
Score = 36.3 bits (80), Expect = 0.002
Identities = 25/69 (36%), Positives = 34/69 (49%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 228
++K H+NI IGHVD GK+T T I KC ++G+ SF +DK
Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQIDK 93
Query: 229 LKAERERGI 255
E+ RGI
Sbjct: 94 APEEKARGI 102
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.004
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCG 138
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 25.0 bits (52), Expect = 5.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLI 386
V +ID+PGH DF + D A+++
Sbjct: 100 VNLIDSPGHVDFSSEVTAALRVTDGALVV 128
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 35.5 bits (78), Expect = 0.004
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCG 138
MGK N+ VI HVD GKST T L+ K G
Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAG 44
Score = 25.0 bits (52), Expect = 5.6
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLI 386
V +ID+PGH DF + D A+++
Sbjct: 100 VNLIDSPGHVDFSSEVTAALRVTDGALVV 128
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 32.3 bits (70), Expect = 0.037
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 4/105 (3%)
Frame = -3
Query: 434 TVLRDTSFEFTGTGSXDEHSAISVRGSCDHVL--DEIS--VSRSINDGNIXLASFELPEN 267
+V+ +T T ++ + +S+ SC L DE S SRS N ++ +
Sbjct: 109 SVMNETDSSSTSVEDVNKENILSLNDSCLIKLSDDEASNKSSRSSTPRNSIKSNSSNQGH 168
Query: 266 NIDCIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 132
IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 169 GDIPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 31.9 bits (69), Expect = 0.049
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +3
Query: 279 FETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
F+ ++T +D PGH F G + AD VL+ A G
Sbjct: 215 FDKGSKFITFLDTPGHMAFEAMRKRGANIADIVVLVVAGDDG 256
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 31.1 bits (67), Expect = 0.086
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 276 KFETSKXY-VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNGQTREH 449
K + K Y + IID PGH DF + D AVL+ A +G I+ + Q R +
Sbjct: 138 KTDFEKSYNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196
Score = 29.9 bits (64), Expect = 0.20
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
NI + H+D GK+T T ++Y G I K+ E+ +G +D ++ ERE
Sbjct: 61 NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVGAKMDFMELERE 110
Query: 247 RGI 255
+GI
Sbjct: 111 KGI 113
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 29.5 bits (63), Expect = 0.26
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N+ +I H+D GK+T T ++Y G F + G V+D L AER+
Sbjct: 30 NVGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGD----TVMDYLPAERQ 76
Query: 247 RGI 255
RGI
Sbjct: 77 RGI 79
Score = 27.1 bits (57), Expect = 1.4
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
TI+ F + +ID PGH DF + + D AV I G
Sbjct: 80 TINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDGSAG 129
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 29.1 bits (62), Expect = 0.35
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 297 YVTIIDAPGHRDFIKNMITGTSHADCAVLIXA 392
+V+ +D PGH + M+ G + D A+L+ A
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIA 140
Score = 25.0 bits (52), Expect = 5.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 37 PKMGKEKTHINIVVIGHVDXGKST 108
P + + INI IGHV GKST
Sbjct: 15 PAIISRQATINIGTIGHVAHGKST 38
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.9 bits (59), Expect = 0.80
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSHADCAVLI 386
IID PGH F GTS + A+L+
Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILV 579
>SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 451
Score = 27.5 bits (58), Expect = 1.1
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +3
Query: 282 ETSKXYVTIIDAPGHRDFIKNMIT-GTSHADCAVLIXAAGTGEFEAGISKNG 434
E S + I P + ++++ T G+ H DC + A F AGI +G
Sbjct: 319 EFSDLILAIKTVPSLQSAMQHINTHGSKHTDCIITSSEAAANRFMAGIDASG 370
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.8 bits (54), Expect = 3.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 229 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSNDQWWWT 101
V +PK I I++ F P S S C+Y S+D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 25.8 bits (54), Expect = 3.2
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N VI H+D GKST + ++ G I++ + F LDKL+ ER
Sbjct: 60 NWAVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERR 103
Query: 247 RGI 255
RGI
Sbjct: 104 RGI 106
Score = 25.4 bits (53), Expect = 4.3
Identities = 10/46 (21%), Positives = 22/46 (47%)
Frame = +3
Query: 267 VLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
+++ + + +ID PGH DF ++ + + +L+ A G
Sbjct: 115 MIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILLVDASQG 160
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 3.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -1
Query: 250 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 152
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 25.4 bits (53), Expect = 4.3
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -3
Query: 308 DGNIXLASFELPENNIDCIPRSRSAFSLSNTQAYLKDPL 192
DG E N ID +PR+ S++S N+ + +P+
Sbjct: 335 DGIFSQTRVENAFNCIDMLPRATSSWSTKNSLVFSSNPI 373
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 25.4 bits (53), Expect = 4.3
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
+ +ID+PGH DF + + + D A ++ A G
Sbjct: 96 INLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 25.0 bits (52), Expect = 5.6
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 309 IDAPGHRDFIKNMITGTSHADCAVLI 386
ID PGH DF+ + + +D VL+
Sbjct: 214 IDTPGHVDFVDEVAAPMAISDGVVLV 239
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 5.6
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 184 PGPPSRTSRWYVCQYHHIC 128
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 24.6 bits (51), Expect = 7.4
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKN 344
+T+ID PG DFI N
Sbjct: 89 LTVIDTPGFGDFINN 103
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 24.6 bits (51), Expect = 7.4
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = -3
Query: 440 GLTVLRDTSFE-FTGTGSXDEHSAISVRGSCDHVLDEISVSRSINDGNI 297
GL L D + + +T T S SAI G H S+S N G +
Sbjct: 725 GLYKLSDNASDLYTQTSSEGRWSAIDANGYTSHCSSIKSLSNDKNSGEV 773
>SPAC4D7.09 |tif223||translation initiation factor
eIF2B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 468
Score = 24.6 bits (51), Expect = 7.4
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -3
Query: 383 EHSAISVRGSCDHVLDEISVSRSINDGNIXLASFELPENNIDCIPRSRSAFSLSNTQAYL 204
EH+A+ + S +L IS R N GNI L S + + S + L+ + A
Sbjct: 5 EHAALPLASS-PSILGPISGGR--NRGNIQLQSIPIEFQAVVFAGFGNSLYPLTGSDALP 61
Query: 203 KDPLPI 186
K LPI
Sbjct: 62 KALLPI 67
>SPAC20H4.09 |||ATP-dependent RNA helicase, spliceosomal
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 24.2 bits (50), Expect = 9.8
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 73 VVIGHVDXGKSTTTGHLIYKCG 138
+V+GH GK+T +Y+ G
Sbjct: 45 IVLGHTGCGKTTQIPQFLYEAG 66
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,760,886
Number of Sequences: 5004
Number of extensions: 32418
Number of successful extensions: 120
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 174340060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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