Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1314
(463 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 136 6e-33
03_01_0547 + 4093196-4093657,4094267-4095148 136 6e-33
03_01_0544 + 4082528-4082989,4083585-4084466 136 6e-33
03_01_0543 + 4076981-4077442,4078145-4079026 136 6e-33
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 83 1e-16
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 83 1e-16
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 79 2e-15
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 73 9e-14
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 70 1e-12
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 52 2e-07
02_04_0462 + 23131433-23132836 52 2e-07
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 34 0.064
03_05_0511 + 25056018-25059107 32 0.26
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 31 0.34
04_01_0103 + 1082077-1082167,1083037-1085477 31 0.45
02_04_0017 + 18937774-18937864,18938505-18940945 31 0.45
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 30 0.79
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 30 1.0
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 30 1.0
01_06_0662 + 30987187-30987277,30987825-30990214 30 1.0
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 29 1.4
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 29 1.4
02_04_0148 - 20198407-20201424 29 1.8
01_01_0016 - 88825-90411 29 1.8
07_01_1023 + 8840754-8842988,8843189-8843362 29 2.4
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 29 2.4
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 29 2.4
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 28 3.2
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 28 3.2
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 28 3.2
04_03_0106 + 11325172-11325379,11326590-11326640,11326987-113270... 28 4.2
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 27 5.6
03_01_0549 - 4102098-4102198,4102394-4102544,4102629-4102760,410... 27 9.7
02_05_0564 + 30003817-30005778 27 9.7
01_05_0712 - 24531654-24531874,24532438-24532538,24532621-245327... 27 9.7
01_01_0402 + 3046504-3046582,3047265-3047487,3047954-3048107,304... 27 9.7
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 136 bits (330), Expect = 6e-33
Identities = 64/71 (90%), Positives = 65/71 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 122 bits (295), Expect = 1e-28
Identities = 57/69 (82%), Positives = 61/69 (88%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 136 bits (330), Expect = 6e-33
Identities = 64/71 (90%), Positives = 65/71 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 122 bits (295), Expect = 1e-28
Identities = 57/69 (82%), Positives = 61/69 (88%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 136 bits (330), Expect = 6e-33
Identities = 64/71 (90%), Positives = 65/71 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 122 bits (295), Expect = 1e-28
Identities = 57/69 (82%), Positives = 61/69 (88%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 136 bits (330), Expect = 6e-33
Identities = 64/71 (90%), Positives = 65/71 (91%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEKTHINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 122 bits (295), Expect = 1e-28
Identities = 57/69 (82%), Positives = 61/69 (88%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +1
Query: 58 THINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237
+ +N+ ++GHVD GKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 238 ERERGI 255
ERERG+
Sbjct: 306 ERERGV 311
Score = 69.3 bits (162), Expect = 1e-12
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKN- 431
T+ + + ET K V ++D+PGH+DF+ NMI+G + AD A+L+ A TG FEAG+
Sbjct: 312 TMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEG 371
Query: 432 ----GQTREHALL 458
GQT+EHA L
Sbjct: 372 GKSVGQTKEHAQL 384
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 82.6 bits (195), Expect = 1e-16
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +1
Query: 58 THINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237
+ +N+ ++GHVD GKST +G L++ G I K+ + K EKEA+E GKGSF YAW +D+
Sbjct: 246 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSE 305
Query: 238 ERERGI 255
ERERG+
Sbjct: 306 ERERGV 311
Score = 69.3 bits (162), Expect = 1e-12
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKN- 431
T+ + + ET K V ++D+PGH+DF+ NMI+G + AD A+L+ A TG FEAG+
Sbjct: 312 TMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDACTGSFEAGMDGEG 371
Query: 432 ----GQTREHALL 458
GQT+EHA L
Sbjct: 372 GKSVGQTKEHAQL 384
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
T+++ FET TI+DAPGH+ ++ NMI+G S AD VL+ +A GEFE G + G
Sbjct: 18 TVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 77
Query: 435 QTREHALLA 461
QTREH LLA
Sbjct: 78 QTREHVLLA 86
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 73.3 bits (172), Expect = 9e-14
Identities = 36/73 (49%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAP----GHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGI 422
T+++ FET TI+DAP GH+ ++ NMI+G S AD VL+ +A GEFE G
Sbjct: 59 TVEVGRAHFETETTRFTILDAPVKMKGHKSYVPNMISGASQADIGVLVISARKGEFETGY 118
Query: 423 SKNGQTREHALLA 461
K GQTREH LLA
Sbjct: 119 EKGGQTREHVLLA 131
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/54 (40%), Positives = 37/54 (68%)
Frame = +1
Query: 91 DXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERG 252
D GKST G +++ G +D RTI+K+EKEA++ + S+ A+++D + ER +G
Sbjct: 4 DAGKSTAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKG 57
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/70 (42%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKN- 431
T+ + + F+T +V ++D+PGH+DF+ NMI+G + +D A+L+ A G FEAG+ N
Sbjct: 299 TMTVGVAYFDTKNYHVVLLDSPGHKDFVPNMISGATQSDAAILVIDASIGSFEAGMGING 358
Query: 432 -GQTREHALL 458
GQT+EH+ L
Sbjct: 359 IGQTKEHSQL 368
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 187 MGKGSFKYAWVLDKLKAERERGI 255
+GKGSF YAW +D+ ERERGI
Sbjct: 276 IGKGSFAYAWAMDESADERERGI 298
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/62 (40%), Positives = 37/62 (59%)
Frame = +3
Query: 276 KFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNGQTREHAL 455
++ET+K + +D PGH D++KNMITG + D +L+ +A G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMP-------QTKEHIL 176
Query: 456 LA 461
LA
Sbjct: 177 LA 178
Score = 34.7 bits (76), Expect = 0.037
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDXGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKG 198
+ K H+N+ IGHVD GK+T T ++ + G ++ +K +E +G
Sbjct: 63 RTKPHVNVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARG 115
>02_04_0462 + 23131433-23132836
Length = 467
Score = 52.4 bits (120), Expect = 2e-07
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TI+ ++ET + +D PGH D++KNMITG + D A+L+ + G
Sbjct: 120 TINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------- 172
Query: 435 QTREHALLA 461
QT+EH LLA
Sbjct: 173 QTKEHILLA 181
Score = 37.5 bits (83), Expect = 0.005
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 40 KMGKEKTHINIVVIGHVDXGKSTTTGHL---IYKCGGIDKRTIEKFEKEAQEMGKG 198
K + K H+NI IGHVD GK+T T L + GG + ++ + +E +G
Sbjct: 63 KFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARG 118
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 33.9 bits (74), Expect = 0.064
Identities = 26/63 (41%), Positives = 30/63 (47%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
N +I HVD GKST L+ G I K G G +Y LDKL+ ERE
Sbjct: 59 NFSIIAHVDHGKSTLADRLLELTGTIKK-------------GHGQPQY---LDKLQVERE 102
Query: 247 RGI 255
RGI
Sbjct: 103 RGI 105
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 31.9 bits (69), Expect = 0.26
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCG 138
N ++ HVD GK+T HL+ CG
Sbjct: 12 NTCILAHVDHGKTTLADHLVASCG 35
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
V +ID+PGH DF + + +D A+++ A G
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEG 111
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 31.5 bits (68), Expect = 0.34
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCG 138
N+ VI HVD GK+T L+ +CG
Sbjct: 66 NVAVIAHVDHGKTTLMDRLLRQCG 89
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 31.1 bits (67), Expect = 0.45
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 16 QFVIRD*PKMGKEKTHI-NIVVIGHVDXGKSTTTGHLIYKCG 138
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 31.1 bits (67), Expect = 0.45
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 16 QFVIRD*PKMGKEKTHI-NIVVIGHVDXGKSTTTGHLIYKCG 138
+F + + ++ +K +I N+ VI HVD GKST T L+ G
Sbjct: 3 KFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 30.3 bits (65), Expect = 0.79
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCG 138
M K+ N+ VI HVD GKST T L+ G
Sbjct: 13 MDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAG 44
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 61 HINIVVIGHVDXGKSTTTGHLIYKCG 138
HI+ V++ H+D GK+TTT ++Y G
Sbjct: 105 HIS-VIMAHIDAGKTTTTERVLYYTG 129
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 29.9 bits (64), Expect = 1.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEK 165
N +I H+D GKST L+ G + KR +++
Sbjct: 79 NFSIIAHIDHGKSTLADKLLELTGTVQKREMKQ 111
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCG 138
M K+ N+ V+ HVD GKST T L+ G
Sbjct: 13 MDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAG 44
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 297 YVTIIDAPGHRDFIKNMITGTSHADCAVLIXAA 395
+V+ +D PGH + M+ G + D A+L+ AA
Sbjct: 149 HVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 181
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
+T +D PGH F G + D VL+ AA G
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDG 281
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEM 189
N ++ HVD GK++ HLI G ++R E+ A+ M
Sbjct: 18 NTCILAHVDHGKTSLADHLIAAYGS-ERRVSERMAGSARVM 57
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
V +ID+PGH DF + AD A+++ A G
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEG 123
>01_01_0016 - 88825-90411
Length = 528
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 461 SEQGMLTGLTVLRDTSFEFTGTGSXDEHSAISV 363
+ +G+L L+V+ F+ TGT + D+H A V
Sbjct: 249 ARRGLLPALSVIEPRYFDLTGTPADDDHPAHDV 281
>07_01_1023 + 8840754-8842988,8843189-8843362
Length = 802
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 377 SAISVRGSCDHVLDEISVSRSINDGNIXLASFELPENNIDCI 252
S+IS G C+ + S N+ N +S +LPE ID I
Sbjct: 138 SSISTGGLCNEANNNTSSKTLTNESNCDTSSDKLPEETIDNI 179
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 291 KXYV-TIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
K Y+ I+D PGH +F M AD AVL+ A G
Sbjct: 217 KSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEG 255
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 28.7 bits (61), Expect = 2.4
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
NI + H+D GK+T T ++Y G R E E ++ G G+ +D + ERE
Sbjct: 70 NIGISAHIDSGKTTLTERVLYYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 119
Query: 247 RGI 255
+GI
Sbjct: 120 KGI 122
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNGQTREHAL 455
V IID PGH DF + D A+L+ + G I+ + Q R + +
Sbjct: 138 VNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEI 189
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 28.3 bits (60), Expect = 3.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 188 WVKDPSNMLGYWTN*RLSVSVVYNR 262
W+ PS+ +GYW N +S +N+
Sbjct: 876 WISSPSSGVGYWGNSEMSQRTFFNQ 900
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 28.3 bits (60), Expect = 3.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSHADCAVLI 386
+ID PGH+ F G+S D A+L+
Sbjct: 489 VIDTPGHQSFSNLRTRGSSLCDIAILV 515
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -3
Query: 359 GSCDHVLDEISVSRSINDGNIXLASFELPENNIDCIPRSRS 237
G DH + + +R I+ GN+ + + NN+ + R+RS
Sbjct: 406 GRFDHAVSSVDKARIIDQGNVEVVTM---HNNVKAVARARS 443
>04_03_0106 +
11325172-11325379,11326590-11326640,11326987-11327073,
11327276-11327373
Length = 147
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 55 KTHINIVVIGHVDXG 99
K H+N+V IGHVD G
Sbjct: 104 KRHLNVVFIGHVDPG 118
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSHADCAVLI 386
+ID PGH F G+S D A+L+
Sbjct: 766 VIDTPGHESFSNLRSRGSSLCDIAILV 792
>03_01_0549 -
4102098-4102198,4102394-4102544,4102629-4102760,
4102988-4103162,4103494-4103945,4104042-4104121,
4104342-4104408,4104709-4104814,4104924-4105033,
4105133-4105201,4105661-4105771,4106263-4106427,
4106639-4106725,4106974-4107027,4107101-4107240,
4107820-4107897,4108066-4108720
Length = 910
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
T+D V +FET + D H +F+ + ++H+ + G G
Sbjct: 655 TLDWVHNRFETKASSTELTDLGNHLEFVSSSEASSNHSKSIAYVGREGEG 704
>02_05_0564 + 30003817-30005778
Length = 653
Score = 26.6 bits (56), Expect = 9.7
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 151 VCQYHHICRSNDQWWW 104
V Y H+C + +WWW
Sbjct: 564 VLTYMHLCAEDWRWWW 579
>01_05_0712 -
24531654-24531874,24532438-24532538,24532621-24532716,
24532951-24533048,24533827-24533883,24534764-24534895,
24535042-24535155,24535227-24535359,24535448-24535678,
24535761-24535843,24536009-24536137,24536504-24536599,
24536719-24536773,24537316-24537386,24537472-24537525,
24537691-24537768,24537985-24538117,24539381-24539496,
24539580-24539651,24540113-24540218,24540657-24540772,
24541170-24541319,24541410-24541492,24541591-24541669,
24542645-24542695
Length = 884
Score = 26.6 bits (56), Expect = 9.7
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Frame = +1
Query: 121 LIYKCGGIDKRTIEKFEKEAQEMGKGSFK--YAWVLDKLK--AERERGIQSILF 270
L +CG +D+ E +KE++ + K SFK A +L KL E E+ +S+LF
Sbjct: 198 LFEECGMLDRALEEMQKKESKIVDKLSFKEQMACILLKLGRFEEAEKTYRSLLF 251
>01_01_0402 +
3046504-3046582,3047265-3047487,3047954-3048107,
3048253-3048355,3048554-3048738,3048972-3049051,
3049433-3049511,3050015-3050096,3050221-3050279,
3050379-3050684,3050825-3050989
Length = 504
Score = 26.6 bits (56), Expect = 9.7
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 139 GIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIQSILFSG 276
G+ I EKE +E+ + AWV+ L A +RGI I+ G
Sbjct: 263 GVLNAIIASLEKEDEELAT---EVAWVVVYLSALSDRGISLIVLRG 305
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,052,164
Number of Sequences: 37544
Number of extensions: 230814
Number of successful extensions: 575
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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