Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1314
         (463 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ396550-1|ABD60145.1|  113|Anopheles gambiae adipokinetic hormo...    22   9.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   9.1  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    22   9.1  

>DQ396550-1|ABD60145.1|  113|Anopheles gambiae adipokinetic hormone
           II protein.
          Length = 113

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 334 SSRT*SQEPLTLIALCSS*LPVP 402
           SSR  + +   L+ALC+  LPVP
Sbjct: 6   SSRHLAAKLFLLVALCAVLLPVP 28


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 148 KRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 243
           KR I +FE E  +      K+    D LKAER
Sbjct: 319 KRKIGEFEVERDQAAGILAKHDETYDALKAER 350


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -3

Query: 338 DEISVSRSINDGNIXLASFELPENNIDCIPRSRSAFSLSNTQAYLK 201
           DE+       +G +   S ++PE ++D  PR+ +   + + +A L+
Sbjct: 59  DEMERKLRYVEGEVKKDSVQIPECSVDDWPRAPNPREIIDLEARLE 104


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 459,614
Number of Sequences: 2352
Number of extensions: 8613
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)