Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1314
(463 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 150 5e-37
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 150 5e-37
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 150 5e-37
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 150 5e-37
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 136 5e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 91 5e-19
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 91 5e-19
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 82 2e-16
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 57 7e-09
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 57 7e-09
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 57 7e-09
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 54 7e-08
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 54 7e-08
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 35 0.033
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.13
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.13
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 32 0.17
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 30 0.70
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 30 0.70
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 30 0.70
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 1.2
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 1.2
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 29 2.1
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 3.7
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 28 3.7
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 28 3.7
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 27 8.6
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 27 8.6
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 27 8.6
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 150 bits (363), Expect = 5e-37
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVD GKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 134 bits (324), Expect = 3e-32
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET+K Y+TIIDAPGHRDFIKNMITGTS ADCAVL+ A GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 150 bits (363), Expect = 5e-37
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVD GKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 89.4 bits (212), Expect = 1e-18
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXA 392
TIDI LWKFET+K Y+TIIDAPGHRDFIKNMITGTS ADCAVL+ A
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 150 bits (363), Expect = 5e-37
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVD GKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 134 bits (324), Expect = 3e-32
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET+K Y+TIIDAPGHRDFIKNMITGTS ADCAVL+ A GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 150 bits (363), Expect = 5e-37
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVD GKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 134 bits (324), Expect = 3e-32
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET+K Y+TIIDAPGHRDFIKNMITGTS ADCAVL+ A GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 136 bits (330), Expect = 5e-33
Identities = 62/67 (92%), Positives = 63/67 (94%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVD GKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 223 DKLKAER 243
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 90.6 bits (215), Expect = 5e-19
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
T+DI FETS + ++DAPGH+DFI NMITGTS AD A+L+ A TGEFE G G
Sbjct: 235 TMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 294
Query: 435 QTREHALL 458
QT+EHALL
Sbjct: 295 QTKEHALL 302
Score = 87.8 bits (208), Expect = 3e-18
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +1
Query: 52 EKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231
+K IN++V+GHVD GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 232 KAERERGI 255
+ ERERG+
Sbjct: 227 EEERERGV 234
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 90.6 bits (215), Expect = 5e-19
Identities = 41/68 (60%), Positives = 49/68 (72%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
T+DI FETS + ++DAPGH+DFI NMITGTS AD A+L+ A TGEFE G G
Sbjct: 253 TMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 312
Query: 435 QTREHALL 458
QT+EHALL
Sbjct: 313 QTKEHALL 320
Score = 87.8 bits (208), Expect = 3e-18
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +1
Query: 52 EKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231
+K IN++V+GHVD GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 232 KAERERGI 255
+ ERERG+
Sbjct: 245 EEERERGV 252
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 82.2 bits (194), Expect = 2e-16
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
T+++ FET K + TI+DAPGH+ F+ NMI G + AD AVL+ +A GEFE G + G
Sbjct: 174 TVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGG 233
Query: 435 QTREHALL 458
QTREH++L
Sbjct: 234 QTREHSML 241
Score = 81.4 bits (192), Expect = 3e-16
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +1
Query: 46 GKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 225
G K HIN+V +GHVD GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 226 KLKAERERG 252
ERE+G
Sbjct: 164 TNDEEREKG 172
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 56.8 bits (131), Expect = 7e-09
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TI+ ++ET+K + ID PGH D+IKNMITG + + A+L+ AA G
Sbjct: 99 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 151
Query: 435 QTREHALLA 461
QTREH LLA
Sbjct: 152 QTREHLLLA 160
Score = 36.3 bits (80), Expect = 0.011
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDXGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 219
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 220 LDKLKAER 243
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 56.8 bits (131), Expect = 7e-09
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TI+ ++ET+K + ID PGH D+IKNMITG + + A+L+ AA G
Sbjct: 100 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 152
Query: 435 QTREHALLA 461
QTREH LLA
Sbjct: 153 QTREHLLLA 161
Score = 36.3 bits (80), Expect = 0.011
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDXGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 219
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 220 LDKLKAER 243
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 56.8 bits (131), Expect = 7e-09
Identities = 31/69 (44%), Positives = 41/69 (59%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TI+ ++ET+K + ID PGH D+IKNMITG + + A+L+ AA G
Sbjct: 100 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 152
Query: 435 QTREHALLA 461
QTREH LLA
Sbjct: 153 QTREHLLLA 161
Score = 36.3 bits (80), Expect = 0.011
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDXGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 219
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 220 LDKLKAER 243
L+ A+R
Sbjct: 106 LEYETAKR 113
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 53.6 bits (123), Expect = 7e-08
Identities = 31/69 (44%), Positives = 39/69 (56%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TI++ +E+ + D PGH DFIKNMI GTS D AVL+ AA G E
Sbjct: 95 TINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------- 147
Query: 435 QTREHALLA 461
QT+EH +LA
Sbjct: 148 QTKEHLILA 156
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 55 KTHINIVVIGHVDXGKSTTT 114
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 53.6 bits (123), Expect = 7e-08
Identities = 31/69 (44%), Positives = 39/69 (56%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TI++ +E+ + D PGH DFIKNMI GTS D AVL+ AA G E
Sbjct: 95 TINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------- 147
Query: 435 QTREHALLA 461
QT+EH +LA
Sbjct: 148 QTKEHLILA 156
Score = 28.7 bits (61), Expect = 2.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 55 KTHINIVVIGHVDXGKSTTT 114
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.7 bits (76), Expect = 0.033
Identities = 27/63 (42%), Positives = 31/63 (49%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
NI VI HVD GK+T T L+Y G I A + KG+ V D L ERE
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI---------HVAGHVDKGN----TVTDFLDIERE 73
Query: 247 RGI 255
RGI
Sbjct: 74 RGI 76
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.13
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCG 138
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.13
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCG 138
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 32.3 bits (70), Expect = 0.17
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
VT +D PGH F G AD VL+ AA G
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDG 240
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.17
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 183
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
+ +ID PGH DF + + D +L+ AA G
Sbjct: 104 LNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG 138
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 31.1 bits (67), Expect = 0.40
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGID 147
NI + H+D GK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 30.3 bits (65), Expect = 0.70
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNGQTREHALLA 461
+ +ID PGH I+ ++ ++ D A++I + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLA 120
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 64 INIVVIGHVDXGKSTTT 114
+N+ ++GHVD GK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 19 FVIRD*PKMGKEKTHINIVVIGHVDXGKSTTTGHLIY 129
++IRD P K+ + V+G+VD GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 30.3 bits (65), Expect = 0.70
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 19 FVIRD*PKMGKEKTHINIVVIGHVDXGKSTTTGHLIY 129
++IRD P K+ + V+G+VD GKST G L +
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 145 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 285 TSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXA 392
T +V+ +D PGH + M+ G + D A L+ A
Sbjct: 124 TCVRHVSFVDCPGHDILMATMLNGAAVMDAAFLLVA 159
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 300 VTIIDAPGHRDFI--KNMITGTSHADCAVLIXAA 395
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 27.9 bits (59), Expect = 3.7
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -3
Query: 332 ISVSRSIND-GNIXLASFELPENNIDCIPR 246
+S ++I+D GNI +F P DCIPR
Sbjct: 197 VSSQQAIHDLGNILKLNFSYPPETRDCIPR 226
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 27.9 bits (59), Expect = 3.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSHADCAVLI 386
IID PGH F G+S D A+L+
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILV 579
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 26.6 bits (56), Expect = 8.6
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +1
Query: 64 INIVVIGHVDXGKSTTT 114
+N+ ++GHVD GK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 288 SKXYV-TIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
SK Y+ IID PGH +F M AD V++ A G
Sbjct: 198 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 26.6 bits (56), Expect = 8.6
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 288 SKXYV-TIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
SK Y+ IID PGH +F M AD V++ A G
Sbjct: 73 SKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,005,000
Number of Sequences: 27780
Number of extensions: 189912
Number of successful extensions: 489
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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