BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1314 (463 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 134 4e-32 At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 134 4e-32 At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 134 4e-32 At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 134 4e-32 At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 81 3e-16 At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 77 6e-15 At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 53 1e-07 At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 51 4e-07 At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.12 At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 32 0.22 At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 31 0.38 At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 31 0.38 At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 31 0.50 At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 31 0.50 At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 30 0.66 At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 30 0.66 At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 30 0.66 At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) /... 29 1.5 At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 29 1.5 At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.5 At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 29 1.5 At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 28 2.7 At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 28 3.5 At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 28 3.5 At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 28 3.5 At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 28 3.5 At3g05470.1 68416.m00599 formin homology 2 domain-containing pro... 27 4.7 At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 27 4.7 At5g41770.1 68418.m05086 crooked neck protein, putative / cell c... 27 6.2 At5g37055.1 68418.m04446 zinc finger (HIT type) family protein c... 27 8.2 >At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha identical to SWISS-PROT:P13905 elongation factor 1-alpha (EF-1-alpha) [Arabidopsis thaliana] Length = 449 Score = 134 bits (323), Expect = 4e-32 Identities = 63/71 (88%), Positives = 64/71 (90%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222 MGKEK HINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 223 DKLKAERERGI 255 DKLKAERERGI Sbjct: 61 DKLKAERERGI 71 Score = 122 bits (295), Expect = 9e-29 Identities = 57/69 (82%), Positives = 61/69 (88%) Frame = +3 Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434 TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131 Query: 435 QTREHALLA 461 QTREHALLA Sbjct: 132 QTREHALLA 140 >At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 134 bits (323), Expect = 4e-32 Identities = 63/71 (88%), Positives = 64/71 (90%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222 MGKEK HINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 223 DKLKAERERGI 255 DKLKAERERGI Sbjct: 61 DKLKAERERGI 71 Score = 122 bits (295), Expect = 9e-29 Identities = 57/69 (82%), Positives = 61/69 (88%) Frame = +3 Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434 TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131 Query: 435 QTREHALLA 461 QTREHALLA Sbjct: 132 QTREHALLA 140 >At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 134 bits (323), Expect = 4e-32 Identities = 63/71 (88%), Positives = 64/71 (90%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222 MGKEK HINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 223 DKLKAERERGI 255 DKLKAERERGI Sbjct: 61 DKLKAERERGI 71 Score = 122 bits (295), Expect = 9e-29 Identities = 57/69 (82%), Positives = 61/69 (88%) Frame = +3 Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434 TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131 Query: 435 QTREHALLA 461 QTREHALLA Sbjct: 132 QTREHALLA 140 >At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 134 bits (323), Expect = 4e-32 Identities = 63/71 (88%), Positives = 64/71 (90%) Frame = +1 Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222 MGKEK HINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 223 DKLKAERERGI 255 DKLKAERERGI Sbjct: 61 DKLKAERERGI 71 Score = 122 bits (295), Expect = 9e-29 Identities = 57/69 (82%), Positives = 61/69 (88%) Frame = +3 Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434 TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131 Query: 435 QTREHALLA 461 QTREHALLA Sbjct: 132 QTREHALLA 140 >At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / EF-1-alpha, putative contains similarity to SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha) [Aeropyrum pernix] Length = 667 Score = 81.4 bits (192), Expect = 3e-16 Identities = 34/66 (51%), Positives = 48/66 (72%) Frame = +1 Query: 58 THINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237 + +N+ ++GHVD GKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297 Query: 238 ERERGI 255 ERERGI Sbjct: 298 ERERGI 303 Score = 70.9 bits (166), Expect = 4e-13 Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 1/67 (1%) Frame = +3 Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISK-N 431 T+ + + F + + +V ++D+PGH+DF+ NMI G + AD A+L+ A G FEAG Sbjct: 304 TMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLK 363 Query: 432 GQTREHA 452 GQTREHA Sbjct: 364 GQTREHA 370 >At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein, putative similar to EF-1-alpha-related GTP-binding protein gi|1009232|gb|AAA79032 Length = 532 Score = 77.0 bits (181), Expect = 6e-15 Identities = 34/69 (49%), Positives = 45/69 (65%) Frame = +3 Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434 T+++ FET TI+DAPGH+ ++ NMI+G S AD VL+ +A GEFE G + G Sbjct: 166 TVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 225 Query: 435 QTREHALLA 461 QTREH LA Sbjct: 226 QTREHVQLA 234 Score = 69.3 bits (162), Expect = 1e-12 Identities = 29/67 (43%), Positives = 47/67 (70%) Frame = +1 Query: 52 EKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231 +K H+N+V IGHVD GKST G +++ G +D R I+K+EKEA++ + S+ A+++D Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157 Query: 232 KAERERG 252 + ER +G Sbjct: 158 EEERLKG 164 >At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) identical to SWISS-PROT:P17745 elongation factor Tu, chloroplast precursor (EF-Tu) [Arabidopsis thaliana] Length = 476 Score = 52.8 bits (121), Expect = 1e-07 Identities = 26/69 (37%), Positives = 38/69 (55%) Frame = +3 Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434 TI+ ++ET + +D PGH D++KNMITG + D A+L+ + G Sbjct: 129 TINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------- 181 Query: 435 QTREHALLA 461 QT+EH LLA Sbjct: 182 QTKEHILLA 190 Score = 39.1 bits (87), Expect = 0.001 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +1 Query: 40 KMGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEK 174 K ++K H+NI IGHVD GK+T T L I +K+++ Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116 >At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu, putative similar to mitochondrial elongation factor Tu [Arabidopsis thaliana] gi|1149571|emb|CAA61511 Length = 454 Score = 50.8 bits (116), Expect = 4e-07 Identities = 24/62 (38%), Positives = 36/62 (58%) Frame = +3 Query: 276 KFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNGQTREHAL 455 ++ET+K + +D PGH D++KNMITG + D +L+ + G QT+EH L Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176 Query: 456 LA 461 LA Sbjct: 177 LA 178 Score = 32.7 bits (71), Expect = 0.12 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +1 Query: 49 KEKTHINIVVIGHVDXGKSTTT 114 + K H+N+ IGHVD GK+T T Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84 >At3g22980.1 68416.m02898 elongation factor Tu family protein similar to eukaryotic translation elongation factor 2 GB:NP_001952 [Homo sapiens] Length = 1015 Score = 32.7 bits (71), Expect = 0.12 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = +1 Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGG 141 NI ++ HVD GK+T HLI GG Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35 Score = 28.3 bits (60), Expect = 2.7 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = +3 Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404 + +ID+PGH DF + T +D A+++ A G Sbjct: 76 LNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110 >At1g62750.1 68414.m07082 elongation factor Tu family protein similar to elongation factor G SP:P34811 [Glycine max (Soybean)] Length = 783 Score = 31.9 bits (69), Expect = 0.22 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +1 Query: 55 KTHINIVVIGHVDXGKSTTTGHLIYKCG 138 K + NI ++ H+D GK+TTT ++Y G Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121 >At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 471 Score = 31.1 bits (67), Expect = 0.38 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 Query: 285 TSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAA 395 T + +V+ +D PGH + M+ G + D A+L+ AA Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160 >At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 284 Score = 31.1 bits (67), Expect = 0.38 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +3 Query: 285 TSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAA 395 T + +V+ +D PGH + M+ G + D A+L+ AA Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160 >At1g06220.2 68414.m00656 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 30.7 bits (66), Expect = 0.50 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = +3 Query: 288 SKXYV-TIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404 SK Y+ I+D PGH +F M AD AVLI A G Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At1g06220.1 68414.m00655 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 30.7 bits (66), Expect = 0.50 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%) Frame = +3 Query: 288 SKXYV-TIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404 SK Y+ I+D PGH +F M AD AVLI A G Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At4g11160.1 68417.m01808 translation initiation factor IF-2, mitochondrial, putative similar to SP|P46198|IF2M_BOVIN Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus} Length = 743 Score = 30.3 bits (65), Expect = 0.66 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +3 Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404 +T +D PGH F + G + D VL+ AA G Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304 >At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative Length = 465 Score = 30.3 bits (65), Expect = 0.66 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 297 YVTIIDAPGHRDFIKNMITGTSHADCAVLIXAA 395 +V+ +D PGH + M+ G + D A+LI AA Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152 >At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to gb|U37354 from S. pombe. ESTs gb|T41979, gb|N37284 and gb|N37529 come from this gene Length = 465 Score = 30.3 bits (65), Expect = 0.66 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +3 Query: 279 FETSKX----YVTIIDAPGHRDFIKNMITGTSHADCAVLIXAA 395 FE SK +V+ +D PGH + M+ G + D A+L+ AA Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154 >At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) / protein kinase, putative nearly identical to IRE (incomplete root hair elongation) [Arabidopsis thaliana] gi|6729346|dbj|BAA89783 Length = 1168 Score = 29.1 bits (62), Expect = 1.5 Identities = 13/40 (32%), Positives = 22/40 (55%) Frame = -3 Query: 344 VLDEISVSRSINDGNIXLASFELPENNIDCIPRSRSAFSL 225 V D +S S ++ S ++ +DC+PRS++ FSL Sbjct: 549 VADSARLSNSSRQEDLDEISQRCSDDMLDCVPRSQNTFSL 588 >At2g45030.1 68415.m05606 mitochondrial elongation factor, putative similar to SP|P25039 Elongation factor G 1, mitochondrial precursor (mEF-G-1) {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03764: Elongation factor G domain IV, PF00679: Elongation factor G C-terminus Length = 754 Score = 29.1 bits (62), Expect = 1.5 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +3 Query: 285 TSKXY-VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNGQTREH 449 T K Y V IID PGH DF + D A+L+ + G I+ + Q R + Sbjct: 129 TWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184 Score = 27.1 bits (57), Expect = 6.2 Identities = 20/63 (31%), Positives = 32/63 (50%) Frame = +1 Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246 NI + H+D GK+T T +++ G R E E ++ G G+ +D + ERE Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116 Query: 247 RGI 255 +GI Sbjct: 117 KGI 119 >At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, putative similar to ELONGATION FACTOR 2 GB:O14460 from [Schizosaccharomyces pombe] Length = 843 Score = 29.1 bits (62), Expect = 1.5 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 Query: 67 NIVVIGHVDXGKSTTTGHLIYKCG 138 N+ VI HVD GKST T L+ G Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44 >At1g45332.1 68414.m05195 mitochondrial elongation factor, putative similar to mitochondrial elongation factor GI:3917 from [Saccharomyces cerevisiae] Length = 754 Score = 29.1 bits (62), Expect = 1.5 Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +3 Query: 285 TSKXY-VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNGQTREH 449 T K Y V IID PGH DF + D A+L+ + G I+ + Q R + Sbjct: 129 TWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184 Score = 27.1 bits (57), Expect = 6.2 Identities = 20/63 (31%), Positives = 32/63 (50%) Frame = +1 Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246 NI + H+D GK+T T +++ G R E E ++ G G+ +D + ERE Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116 Query: 247 RGI 255 +GI Sbjct: 117 KGI 119 >At5g08650.1 68418.m01029 GTP-binding protein LepA, putative Length = 681 Score = 28.3 bits (60), Expect = 2.7 Identities = 11/33 (33%), Positives = 18/33 (54%) Frame = +1 Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEK 165 N +I H+D GKST L+ G + R +++ Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120 Score = 26.6 bits (56), Expect = 8.2 Identities = 12/42 (28%), Positives = 21/42 (50%) Frame = +3 Query: 279 FETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404 +E + + +ID PGH DF + + + A+L+ A G Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188 >At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-binding protein GUF1 - Saccharomyces cerevisiae, PIR:S50374 Length = 661 Score = 27.9 bits (59), Expect = 3.5 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +1 Query: 31 D*PKMGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDK 150 D K EK N +I H+D GKST L+ G I K Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95 Score = 27.5 bits (58), Expect = 4.7 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +3 Query: 282 ETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404 E S + +ID PGH DF + S A+L+ A G Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171 >At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain Length = 630 Score = 27.9 bits (59), Expect = 3.5 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +3 Query: 306 IIDAPGHRDFIKNMITGTSHADCAVLI 386 +ID PGH F G+S D A+L+ Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILV 139 >At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to IF2 protein [Drosophila melanogaster] GI:7108770; contains Pfam profile PF03144: Elongation factor Tu domain 2 Length = 1294 Score = 27.9 bits (59), Expect = 3.5 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +3 Query: 306 IIDAPGHRDFIKNMITGTSHADCAVLI 386 +ID PGH F G+S D A+L+ Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILV 798 >At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1201 Score = 27.9 bits (59), Expect = 3.5 Identities = 11/27 (40%), Positives = 15/27 (55%) Frame = +3 Query: 306 IIDAPGHRDFIKNMITGTSHADCAVLI 386 +ID PGH F G+S D A+L+ Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILV 731 >At3g05470.1 68416.m00599 formin homology 2 domain-containing protein / FH2 domain-containing protein contains formin homology 2 domain, Pfam:PF02181 Length = 884 Score = 27.5 bits (58), Expect = 4.7 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Frame = -3 Query: 392 SXDEHSAISVRGSCDHVLDEISVSRSINDGNIXLASFE-LPENNIDCIPRSRSAFSLSNT 216 S D+ S SV G + +S + S + G++ + S + E+ +D SRS F +S + Sbjct: 308 SDDDESFHSVGGGSQYSNPRLSNASSAS-GSVNVGSSQRFSEHKLDIPECSRSDFGISVS 366 Query: 215 QAYLKDPLPISWASFSNFSMVRLSIP 138 P P FSN + LS P Sbjct: 367 APPPPPPPPPPLPQFSNKRIHTLSSP 392 >At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1088 Score = 27.5 bits (58), Expect = 4.7 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = +3 Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLI 386 + +ID PGH F G++ D A+L+ Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILV 586 >At5g41770.1 68418.m05086 crooked neck protein, putative / cell cycle protein, putative similar to Swiss-Prot:P17886 crooked neck protein [Drosophila melanogaster] Length = 705 Score = 27.1 bits (57), Expect = 6.2 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -3 Query: 272 ENNIDCIPRSRSAFSLSNTQAYLKDPLP 189 E+ DCI R+R+ F +NT Y KD P Sbjct: 591 EHKKDCIKRARAIFDRANT--YYKDSTP 616 >At5g37055.1 68418.m04446 zinc finger (HIT type) family protein contains Pfam profile: PF04438 HIT zinc finger Length = 171 Score = 26.6 bits (56), Expect = 8.2 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -1 Query: 220 IPKHI*RILYPFPGPPSRTSRWYVC 146 +P H+ L GPPS +SR Y C Sbjct: 110 LPSHVPTYLKAAVGPPSSSSRRYFC 134 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,458,866 Number of Sequences: 28952 Number of extensions: 177131 Number of successful extensions: 482 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 450 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 482 length of database: 12,070,560 effective HSP length: 75 effective length of database: 9,899,160 effective search space used: 772134480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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