Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1314
(463 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 134 4e-32
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 134 4e-32
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 134 4e-32
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 134 4e-32
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 81 3e-16
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 77 6e-15
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 53 1e-07
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 51 4e-07
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.12
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 32 0.22
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 31 0.38
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 31 0.38
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 31 0.50
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 31 0.50
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 30 0.66
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 30 0.66
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 30 0.66
At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) /... 29 1.5
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 29 1.5
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.5
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 29 1.5
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 28 2.7
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 28 3.5
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 28 3.5
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 28 3.5
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 28 3.5
At3g05470.1 68416.m00599 formin homology 2 domain-containing pro... 27 4.7
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 27 4.7
At5g41770.1 68418.m05086 crooked neck protein, putative / cell c... 27 6.2
At5g37055.1 68418.m04446 zinc finger (HIT type) family protein c... 27 8.2
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 134 bits (323), Expect = 4e-32
Identities = 63/71 (88%), Positives = 64/71 (90%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 122 bits (295), Expect = 9e-29
Identities = 57/69 (82%), Positives = 61/69 (88%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 134 bits (323), Expect = 4e-32
Identities = 63/71 (88%), Positives = 64/71 (90%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 122 bits (295), Expect = 9e-29
Identities = 57/69 (82%), Positives = 61/69 (88%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 134 bits (323), Expect = 4e-32
Identities = 63/71 (88%), Positives = 64/71 (90%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 122 bits (295), Expect = 9e-29
Identities = 57/69 (82%), Positives = 61/69 (88%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 134 bits (323), Expect = 4e-32
Identities = 63/71 (88%), Positives = 64/71 (90%)
Frame = +1
Query: 43 MGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 222
MGKEK HINIVVIGHVD GKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 223 DKLKAERERGI 255
DKLKAERERGI
Sbjct: 61 DKLKAERERGI 71
Score = 122 bits (295), Expect = 9e-29
Identities = 57/69 (82%), Positives = 61/69 (88%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TIDI LWKFET+K Y T+IDAPGHRDFIKNMITGTS ADCAVLI + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 435 QTREHALLA 461
QTREHALLA
Sbjct: 132 QTREHALLA 140
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/66 (51%), Positives = 48/66 (72%)
Frame = +1
Query: 58 THINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 237
+ +N+ ++GHVD GKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 238 ERERGI 255
ERERGI
Sbjct: 298 ERERGI 303
Score = 70.9 bits (166), Expect = 4e-13
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISK-N 431
T+ + + F + + +V ++D+PGH+DF+ NMI G + AD A+L+ A G FEAG
Sbjct: 304 TMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLK 363
Query: 432 GQTREHA 452
GQTREHA
Sbjct: 364 GQTREHA 370
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 77.0 bits (181), Expect = 6e-15
Identities = 34/69 (49%), Positives = 45/69 (65%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
T+++ FET TI+DAPGH+ ++ NMI+G S AD VL+ +A GEFE G + G
Sbjct: 166 TVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 225
Query: 435 QTREHALLA 461
QTREH LA
Sbjct: 226 QTREHVQLA 234
Score = 69.3 bits (162), Expect = 1e-12
Identities = 29/67 (43%), Positives = 47/67 (70%)
Frame = +1
Query: 52 EKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 231
+K H+N+V IGHVD GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 232 KAERERG 252
+ ER +G
Sbjct: 158 EEERLKG 164
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 52.8 bits (121), Expect = 1e-07
Identities = 26/69 (37%), Positives = 38/69 (55%)
Frame = +3
Query: 255 TIDIVLWKFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNG 434
TI+ ++ET + +D PGH D++KNMITG + D A+L+ + G
Sbjct: 129 TINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------- 181
Query: 435 QTREHALLA 461
QT+EH LLA
Sbjct: 182 QTKEHILLA 190
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 40 KMGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEK 174
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 50.8 bits (116), Expect = 4e-07
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +3
Query: 276 KFETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNGQTREHAL 455
++ET+K + +D PGH D++KNMITG + D +L+ + G QT+EH L
Sbjct: 124 EYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHIL 176
Query: 456 LA 461
LA
Sbjct: 177 LA 178
Score = 32.7 bits (71), Expect = 0.12
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 49 KEKTHINIVVIGHVDXGKSTTT 114
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.12
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGG 141
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 28.3 bits (60), Expect = 2.7
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
+ +ID+PGH DF + T +D A+++ A G
Sbjct: 76 LNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 31.9 bits (69), Expect = 0.22
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 55 KTHINIVVIGHVDXGKSTTTGHLIYKCG 138
K + NI ++ H+D GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 31.1 bits (67), Expect = 0.38
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 285 TSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAA 395
T + +V+ +D PGH + M+ G + D A+L+ AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 31.1 bits (67), Expect = 0.38
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +3
Query: 285 TSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAA 395
T + +V+ +D PGH + M+ G + D A+L+ AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.7 bits (66), Expect = 0.50
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 288 SKXYV-TIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
SK Y+ I+D PGH +F M AD AVLI A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 30.7 bits (66), Expect = 0.50
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 288 SKXYV-TIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
SK Y+ I+D PGH +F M AD AVLI A G
Sbjct: 206 SKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 30.3 bits (65), Expect = 0.66
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
+T +D PGH F + G + D VL+ AA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 30.3 bits (65), Expect = 0.66
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 297 YVTIIDAPGHRDFIKNMITGTSHADCAVLIXAA 395
+V+ +D PGH + M+ G + D A+LI AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 30.3 bits (65), Expect = 0.66
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +3
Query: 279 FETSKX----YVTIIDAPGHRDFIKNMITGTSHADCAVLIXAA 395
FE SK +V+ +D PGH + M+ G + D A+L+ AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) /
protein kinase, putative nearly identical to IRE
(incomplete root hair elongation) [Arabidopsis thaliana]
gi|6729346|dbj|BAA89783
Length = 1168
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 344 VLDEISVSRSINDGNIXLASFELPENNIDCIPRSRSAFSL 225
V D +S S ++ S ++ +DC+PRS++ FSL
Sbjct: 549 VADSARLSNSSRQEDLDEISQRCSDDMLDCVPRSQNTFSL 588
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 29.1 bits (62), Expect = 1.5
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 285 TSKXY-VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNGQTREH 449
T K Y V IID PGH DF + D A+L+ + G I+ + Q R +
Sbjct: 129 TWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.1 bits (57), Expect = 6.2
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
NI + H+D GK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 247 RGI 255
+GI
Sbjct: 117 KGI 119
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.1 bits (62), Expect = 1.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCG 138
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 29.1 bits (62), Expect = 1.5
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +3
Query: 285 TSKXY-VTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTGEFEAGISKNGQTREH 449
T K Y V IID PGH DF + D A+L+ + G I+ + Q R +
Sbjct: 129 TWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.1 bits (57), Expect = 6.2
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 246
NI + H+D GK+T T +++ G R E E ++ G G+ +D + ERE
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTG----RIHEIHEVRGRD-GVGA-----KMDSMDLERE 116
Query: 247 RGI 255
+GI
Sbjct: 117 KGI 119
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 28.3 bits (60), Expect = 2.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 67 NIVVIGHVDXGKSTTTGHLIYKCGGIDKRTIEK 165
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
Score = 26.6 bits (56), Expect = 8.2
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 279 FETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
+E + + +ID PGH DF + + + A+L+ A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +1
Query: 31 D*PKMGKEKTHINIVVIGHVDXGKSTTTGHLIYKCGGIDK 150
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
Score = 27.5 bits (58), Expect = 4.7
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 282 ETSKXYVTIIDAPGHRDFIKNMITGTSHADCAVLIXAAGTG 404
E S + +ID PGH DF + S A+L+ A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSHADCAVLI 386
+ID PGH F G+S D A+L+
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILV 139
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSHADCAVLI 386
+ID PGH F G+S D A+L+
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILV 798
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 27.9 bits (59), Expect = 3.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 306 IIDAPGHRDFIKNMITGTSHADCAVLI 386
+ID PGH F G+S D A+L+
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILV 731
>At3g05470.1 68416.m00599 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 884
Score = 27.5 bits (58), Expect = 4.7
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = -3
Query: 392 SXDEHSAISVRGSCDHVLDEISVSRSINDGNIXLASFE-LPENNIDCIPRSRSAFSLSNT 216
S D+ S SV G + +S + S + G++ + S + E+ +D SRS F +S +
Sbjct: 308 SDDDESFHSVGGGSQYSNPRLSNASSAS-GSVNVGSSQRFSEHKLDIPECSRSDFGISVS 366
Query: 215 QAYLKDPLPISWASFSNFSMVRLSIP 138
P P FSN + LS P
Sbjct: 367 APPPPPPPPPPLPQFSNKRIHTLSSP 392
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 27.5 bits (58), Expect = 4.7
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +3
Query: 300 VTIIDAPGHRDFIKNMITGTSHADCAVLI 386
+ +ID PGH F G++ D A+L+
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILV 586
>At5g41770.1 68418.m05086 crooked neck protein, putative / cell
cycle protein, putative similar to Swiss-Prot:P17886
crooked neck protein [Drosophila melanogaster]
Length = 705
Score = 27.1 bits (57), Expect = 6.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 272 ENNIDCIPRSRSAFSLSNTQAYLKDPLP 189
E+ DCI R+R+ F +NT Y KD P
Sbjct: 591 EHKKDCIKRARAIFDRANT--YYKDSTP 616
>At5g37055.1 68418.m04446 zinc finger (HIT type) family protein
contains Pfam profile: PF04438 HIT zinc finger
Length = 171
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 220 IPKHI*RILYPFPGPPSRTSRWYVC 146
+P H+ L GPPS +SR Y C
Sbjct: 110 LPSHVPTYLKAAVGPPSSSSRRYFC 134
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,458,866
Number of Sequences: 28952
Number of extensions: 177131
Number of successful extensions: 482
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 772134480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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