Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1312
         (454 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   2.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   5.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.1  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   7.1  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   9.4  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    20   9.4  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 78  FQCNKYCNYVSRPLLNRFNTIFSNF 4
           F CN +  +    + N   T+F+NF
Sbjct: 443 FICNSFTKFEFNTVFNDQRTVFANF 467


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 298 DLDLLKGLQFRHRHMMMIDF 239
           DLDL +GL F+ R  + + F
Sbjct: 455 DLDLSRGLDFQPRGSVFVRF 474


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 432 NVLERGLFC 406
           N +ERGLFC
Sbjct: 128 NCIERGLFC 136


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 372 LSPXTKPVLLTNKRGHAQG 428
           LSP  +P+L+T ++  A+G
Sbjct: 240 LSPVHEPLLITTEKLAAEG 258


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 161 RNQLRPQSPTSGA 199
           R Q++PQSP+S +
Sbjct: 19  RMQIKPQSPSSSS 31


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 161 RNQLRPQSPTSGA 199
           R Q++PQSP+S +
Sbjct: 19  RMQIKPQSPSSSS 31


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 328 ELLFELTDKPDL 293
           ELL  L+DKP+L
Sbjct: 428 ELLHALSDKPEL 439


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 63  YCNYVSRPLLNRFNTIFSNF 4
           +C+ VS   LN  N   +NF
Sbjct: 398 FCHMVSHKWLNYINQFEANF 417


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,372
Number of Sequences: 336
Number of extensions: 1686
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10301074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)