Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1312
         (454 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   104   2e-24
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    22   8.8  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           22   8.8  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  104 bits (249), Expect = 2e-24
 Identities = 48/67 (71%), Positives = 56/67 (83%)
 Frame = +2

Query: 254 HVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPXHKTRVANKQKRPRSRTL 433
           +VP+PK KAFQK+Q RLVRELEKKFSGKHVVF+ +R+ILPKP    R  NKQKRPRS  +
Sbjct: 61  YVPVPKQKAFQKVQTRLVRELEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNV 120

Query: 434 TSVYDAI 454
           T+VYDAI
Sbjct: 121 TAVYDAI 127



 Score = 80.2 bits (189), Expect = 3e-17
 Identities = 36/56 (64%), Positives = 47/56 (83%)
 Frame = +3

Query: 87  TKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIII 254
           +K+IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+III
Sbjct: 5   SKVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIII 60


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 217 KKLNYTIRSRSSSCADA*TEGLSEDPDQA 303
           +KL +  +S SS+C    TEG  E+P +A
Sbjct: 888 RKLLFKKKSTSSTCVLLETEGF-EEPSRA 915


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -1

Query: 451  SIVHRGQCP*AWPLLFVSNTGFV 383
            SIVHR +     PLL V+   FV
Sbjct: 1012 SIVHRQEIEDMLPLLLVATCAFV 1034


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,588
Number of Sequences: 2352
Number of extensions: 7339
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)