Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1312
(454 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 113 4e-25
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 113 4e-25
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 113 4e-25
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 113 4e-25
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 113 4e-25
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 113 4e-25
AB023222-1|BAA76849.1| 1055|Homo sapiens KIAA1005 protein protein. 29 5.6
BC093736-1|AAH93736.1| 367|Homo sapiens heparan sulfate D-gluco... 29 9.8
BC093734-1|AAH93734.1| 367|Homo sapiens heparan sulfate (glucos... 29 9.8
AY359095-1|AAQ89453.1| 367|Homo sapiens HS3ST2 protein. 29 9.8
AF105375-1|AAD30207.1| 367|Homo sapiens heparan sulfate D-gluco... 29 9.8
AF105374-1|AAD30206.1| 367|Homo sapiens heparan sulfate D-gluco... 29 9.8
AB209794-1|BAD93031.1| 345|Homo sapiens heparan sulfate D-gluco... 29 9.8
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 113 bits (271), Expect = 4e-25
Identities = 51/66 (77%), Positives = 60/66 (90%)
Frame = +2
Query: 257 VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPXHKTRVANKQKRPRSRTLT 436
VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP K+R NKQKRPRSRTLT
Sbjct: 64 VPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLT 123
Query: 437 SVYDAI 454
+V+DAI
Sbjct: 124 AVHDAI 129
Score = 71.7 bits (168), Expect = 1e-12
Identities = 38/58 (65%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIII 254
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIII 62
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 113 bits (271), Expect = 4e-25
Identities = 51/66 (77%), Positives = 60/66 (90%)
Frame = +2
Query: 257 VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPXHKTRVANKQKRPRSRTLT 436
VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP K+R NKQKRPRSRTLT
Sbjct: 62 VPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLT 121
Query: 437 SVYDAI 454
+V+DAI
Sbjct: 122 AVHDAI 127
Score = 71.7 bits (168), Expect = 1e-12
Identities = 38/58 (65%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIII 254
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIII 60
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 113 bits (271), Expect = 4e-25
Identities = 51/66 (77%), Positives = 60/66 (90%)
Frame = +2
Query: 257 VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPXHKTRVANKQKRPRSRTLT 436
VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP K+R NKQKRPRSRTLT
Sbjct: 64 VPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLT 123
Query: 437 SVYDAI 454
+V+DAI
Sbjct: 124 AVHDAI 129
Score = 71.7 bits (168), Expect = 1e-12
Identities = 38/58 (65%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIII 254
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIII 62
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 113 bits (271), Expect = 4e-25
Identities = 51/66 (77%), Positives = 60/66 (90%)
Frame = +2
Query: 257 VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPXHKTRVANKQKRPRSRTLT 436
VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP K+R NKQKRPRSRTLT
Sbjct: 64 VPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLT 123
Query: 437 SVYDAI 454
+V+DAI
Sbjct: 124 AVHDAI 129
Score = 71.7 bits (168), Expect = 1e-12
Identities = 38/58 (65%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIII 254
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIII 62
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 113 bits (271), Expect = 4e-25
Identities = 51/66 (77%), Positives = 60/66 (90%)
Frame = +2
Query: 257 VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPXHKTRVANKQKRPRSRTLT 436
VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP K+R NKQKRPRSRTLT
Sbjct: 64 VPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLT 123
Query: 437 SVYDAI 454
+V+DAI
Sbjct: 124 AVHDAI 129
Score = 71.7 bits (168), Expect = 1e-12
Identities = 38/58 (65%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIII 254
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIII 62
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 113 bits (271), Expect = 4e-25
Identities = 51/66 (77%), Positives = 60/66 (90%)
Frame = +2
Query: 257 VPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPXHKTRVANKQKRPRSRTLT 436
VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP K+R NKQKRPRSRTLT
Sbjct: 64 VPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLT 123
Query: 437 SVYDAI 454
+V+DAI
Sbjct: 124 AVHDAI 129
Score = 71.7 bits (168), Expect = 1e-12
Identities = 38/58 (65%), Positives = 46/58 (79%), Gaps = 1/58 (1%)
Frame = +3
Query: 84 STKIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIEL-HNKKSIII 254
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIII 62
>AB023222-1|BAA76849.1| 1055|Homo sapiens KIAA1005 protein protein.
Length = 1055
Score = 29.5 bits (63), Expect = 5.6
Identities = 15/41 (36%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +3
Query: 153 VELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIMCRCLN 272
V+ E N DL+ +REL T A+ + EL ++++IM +N
Sbjct: 303 VDSEINKDLERSMRELQATHAETVQELEKTRNMLIMQHKIN 343
>BC093736-1|AAH93736.1| 367|Homo sapiens heparan sulfate
D-glucosaminyl 3-O-sulfotransferase 2 protein.
Length = 367
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = -1
Query: 397 NTGFVXGLRQDLTVSNKDYMFTTELLFELTDKPDLDLLKGLQFRHRHMMMIDFLLCSSIS 218
+T + +R +T + DY T L+ KPD+ +GL FR+R + ++D + ++I
Sbjct: 197 DTKLIVVVRNPVTRAISDYTQT------LSKKPDIPTFEGLSFRNRTLGLVD-VSWNAIR 249
Query: 217 LAFVM*SSRSW 185
+ + SW
Sbjct: 250 IGMYVLHLESW 260
>BC093734-1|AAH93734.1| 367|Homo sapiens heparan sulfate
(glucosamine) 3-O-sulfotransferase 2 protein.
Length = 367
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = -1
Query: 397 NTGFVXGLRQDLTVSNKDYMFTTELLFELTDKPDLDLLKGLQFRHRHMMMIDFLLCSSIS 218
+T + +R +T + DY T L+ KPD+ +GL FR+R + ++D + ++I
Sbjct: 197 DTKLIVVVRNPVTRAISDYTQT------LSKKPDIPTFEGLSFRNRTLGLVD-VSWNAIR 249
Query: 217 LAFVM*SSRSW 185
+ + SW
Sbjct: 250 IGMYVLHLESW 260
>AY359095-1|AAQ89453.1| 367|Homo sapiens HS3ST2 protein.
Length = 367
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = -1
Query: 397 NTGFVXGLRQDLTVSNKDYMFTTELLFELTDKPDLDLLKGLQFRHRHMMMIDFLLCSSIS 218
+T + +R +T + DY T L+ KPD+ +GL FR+R + ++D + ++I
Sbjct: 197 DTKLIVVVRNPVTRAISDYTQT------LSKKPDIPTFEGLSFRNRTLGLVD-VSWNAIR 249
Query: 217 LAFVM*SSRSW 185
+ + SW
Sbjct: 250 IGMYVLHLESW 260
>AF105375-1|AAD30207.1| 367|Homo sapiens heparan sulfate
D-glucosaminyl 3-O-sulfotransferase-2 protein.
Length = 367
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = -1
Query: 397 NTGFVXGLRQDLTVSNKDYMFTTELLFELTDKPDLDLLKGLQFRHRHMMMIDFLLCSSIS 218
+T + +R +T + DY T L+ KPD+ +GL FR+R + ++D + ++I
Sbjct: 197 DTKLIVVVRNPVTRAISDYTQT------LSKKPDIPTFEGLSFRNRTLGLVD-VSWNAIR 249
Query: 217 LAFVM*SSRSW 185
+ + SW
Sbjct: 250 IGMYVLHLESW 260
>AF105374-1|AAD30206.1| 367|Homo sapiens heparan sulfate
D-glucosaminyl 3-O-sulfotransferase-2 protein.
Length = 367
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = -1
Query: 397 NTGFVXGLRQDLTVSNKDYMFTTELLFELTDKPDLDLLKGLQFRHRHMMMIDFLLCSSIS 218
+T + +R +T + DY T L+ KPD+ +GL FR+R + ++D + ++I
Sbjct: 197 DTKLIVVVRNPVTRAISDYTQT------LSKKPDIPTFEGLSFRNRTLGLVD-VSWNAIR 249
Query: 217 LAFVM*SSRSW 185
+ + SW
Sbjct: 250 IGMYVLHLESW 260
>AB209794-1|BAD93031.1| 345|Homo sapiens heparan sulfate
D-glucosaminyl 3-O-sulfotransferase 2 variant protein.
Length = 345
Score = 28.7 bits (61), Expect = 9.8
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = -1
Query: 397 NTGFVXGLRQDLTVSNKDYMFTTELLFELTDKPDLDLLKGLQFRHRHMMMIDFLLCSSIS 218
+T + +R +T + DY T L+ KPD+ +GL FR+R + ++D + ++I
Sbjct: 205 DTKLIVVVRNPVTRAISDYTQT------LSKKPDIPTFEGLSFRNRTLGLVD-VSWNAIR 257
Query: 217 LAFVM*SSRSW 185
+ + SW
Sbjct: 258 IGMYVLHLESW 268
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,818,291
Number of Sequences: 237096
Number of extensions: 1086228
Number of successful extensions: 5839
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5839
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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