BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1311 (660 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces ... 45 1e-05 SPBC4C3.08 |mug136||acetylglucosaminyltransferase|Schizosaccharo... 40 3e-04 SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyce... 34 0.021 SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 29 0.45 SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 26 4.2 SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyc... 26 4.2 SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 26 5.5 SPAC25B8.15c |||wybutosine biosynthesis protein Tyw3|Schizosacch... 25 7.3 SPBC8D2.17 |||alpha-1,2-galactosyltransferase|Schizosaccharomyce... 25 9.7 SPBC1861.06c |mug131||S. pombe specific UPF0300 family protein 4... 25 9.7 >SPBC4C3.09 |||acetylglucosaminyltransferase|Schizosaccharomyces pombe|chr 2|||Manual Length = 376 Score = 44.8 bits (101), Expect = 1e-05 Identities = 22/61 (36%), Positives = 38/61 (62%) Frame = +3 Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479 FTK+ + TQ++K LD+D+LV++N D++F+ + +P PD F+ +F KP + Sbjct: 166 FTKLSVFEQTQFDKVCILDSDLLVLKNMDDIFDTPYVYESP--AEPDMFSFPIFK-KPDD 222 Query: 480 E 482 E Sbjct: 223 E 223 Score = 25.8 bits (54), Expect = 5.5 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Frame = +1 Query: 70 VTLATN--DSYGLGALVLAHSLRR---AGSVYPAVALITPTVSEAMRDRLRAVFSEVVTV 234 +TL T+ D Y VL + L+ S YP L+ V E +RLR +E++ V Sbjct: 81 LTLPTSEHDVYFNATRVLVYKLKHHPETKSKYPVHVLVMKGVDEWKIERLRLDGAEIIMV 140 Query: 235 DVLDSRE 255 D + + + Sbjct: 141 DQIKTED 147 >SPBC4C3.08 |mug136||acetylglucosaminyltransferase|Schizosaccharomyc es pombe|chr 2|||Manual Length = 372 Score = 39.9 bits (89), Expect = 3e-04 Identities = 16/42 (38%), Positives = 29/42 (69%) Frame = +3 Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPD 425 FTK+ + + +Y++ FLD+DIL I+ D++F+ +LS + D Sbjct: 157 FTKLRVFEMYEYDRICFLDSDILPIKKMDKVFDVHQLSYSKD 198 Score = 27.1 bits (57), Expect = 2.4 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +3 Query: 438 DCFNSGVFVFKPSNETXEKLIQFA 509 D FN+G+FVFKP ++L+ A Sbjct: 256 DYFNAGLFVFKPLKAHYKRLMALA 279 >SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyces pombe|chr 1|||Manual Length = 371 Score = 33.9 bits (74), Expect = 0.021 Identities = 11/33 (33%), Positives = 24/33 (72%) Frame = +3 Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFE 398 F+K+ + Q++K +D+DIL+++N D++F+ Sbjct: 161 FSKLRIFEQIQFDKICVIDSDILIMKNIDDIFD 193 >SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual Length = 1489 Score = 29.5 bits (63), Expect = 0.45 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = +1 Query: 151 PAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRERL 261 P V + +P + D L A +++V+T+DVLD R +L Sbjct: 1438 PTVKVSSPRCELHLDDLLSAQYNKVLTLDVLDGRLKL 1474 >SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schizosaccharomyces pombe|chr 1|||Manual Length = 893 Score = 26.2 bits (55), Expect = 4.2 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Frame = -2 Query: 401 TLEEFIAILDHQYIGI*EYAFLVLSEVPAVYLCEGDAELWPLEEGQVSR--SLESRTSTV 228 +L I D+ I + Y ++ E+PA+Y A W + E Q R SL TS + Sbjct: 152 SLAALFVIFDNGLITMSRY---IMIEIPALYFMSLTAFYWSVYEAQQKRPFSLRWHTSLL 208 Query: 227 TT 222 +T Sbjct: 209 ST 210 >SPBC713.12 |erg1||squalene monooxygenase Erg1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 457 Score = 26.2 bits (55), Expect = 4.2 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +1 Query: 124 SLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 231 +LR+A + P V + TV+E +RD V + VVT Sbjct: 112 NLRKALTSTPNVTVTEATVNELLRDETGEVITGVVT 147 >SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme |Schizosaccharomyces pombe|chr 2|||Manual Length = 1012 Score = 25.8 bits (54), Expect = 5.5 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -2 Query: 293 AELWPLEEGQVSRSLESRTSTVTTSEKTARRR 198 ++ +PL++ SLES S+VT SE+T + R Sbjct: 375 SKFYPLKQYFYFDSLESLPSSVTISEETCKPR 406 >SPAC25B8.15c |||wybutosine biosynthesis protein Tyw3|Schizosaccharomyces pombe|chr 1|||Manual Length = 237 Score = 25.4 bits (53), Expect = 7.3 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = -3 Query: 487 KVSFEGLKTKTPELKQSGHPTS 422 K EGLK+ P+ GHP S Sbjct: 15 KEILEGLKSSVPDASPKGHPDS 36 >SPBC8D2.17 |||alpha-1,2-galactosyltransferase|Schizosaccharomyces pombe|chr 2|||Manual Length = 351 Score = 25.0 bits (52), Expect = 9.7 Identities = 9/35 (25%), Positives = 18/35 (51%) Frame = +3 Query: 399 REELSAAPDVGWPDCFNSGVFVFKPSNETXEKLIQ 503 RE L+ PD GW ++ + PS +++++ Sbjct: 132 RETLAEYPDAGWIWLLDAKAVIMNPSESLKDRVLK 166 >SPBC1861.06c |mug131||S. pombe specific UPF0300 family protein 4|Schizosaccharomyces pombe|chr 2|||Manual Length = 433 Score = 25.0 bits (52), Expect = 9.7 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +1 Query: 88 DSYGLGALVLAHSLRRAGSVYPAVALI 168 +S G L L H+LR+ G+++P A + Sbjct: 312 NSTEFGWLALTHALRKKGAIFPIHAYL 338 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,534,026 Number of Sequences: 5004 Number of extensions: 47778 Number of successful extensions: 148 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 148 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 299817502 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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