BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1311 (660 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_04_0376 - 20754386-20755392,20755683-20756320,20756433-207566... 61 9e-10 03_01_0598 + 4410722-4410988,4411112-4411745,4414612-4415555 61 9e-10 01_06_1550 + 38191957-38192054,38193084-38193284,38193456-381940... 61 9e-10 02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345 53 2e-07 10_08_0883 + 21279913-21280235,21281066-21281327,21281998-212821... 48 7e-06 03_02_0800 + 11337206-11337532,11337634-11337957,11338060-113381... 46 3e-05 04_04_0739 - 27693768-27694305,27694765-27694912,27694987-276951... 46 4e-05 04_04_0516 + 25833801-25834046,25834412-25834532,25834636-258348... 46 4e-05 02_05_0007 + 24918163-24918420,24919360-24919410,24919411-249194... 45 6e-05 07_03_1743 - 29167078-29167290,29167389-29168159 43 2e-04 02_05_1197 - 34908382-34908582,34908664-34908837,34909239-349093... 30 1.4 10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223 29 4.3 01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465... 29 4.3 06_02_0308 + 14124373-14124706,14124888-14124910 28 7.6 01_05_0513 - 22864657-22867899 28 7.6 >05_04_0376 - 20754386-20755392,20755683-20756320,20756433-20756627, 20757730-20757795,20757942-20758007,20758402-20758445 Length = 671 Score = 60.9 bits (141), Expect = 9e-10 Identities = 28/67 (41%), Positives = 43/67 (64%) Frame = +3 Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479 ++K W LT Y+K +F+DAD+L+++N D LF E++A + FNSGV V +PSN Sbjct: 423 YSKFRLWQLTDYDKIIFIDADLLILRNVDFLFAMPEITATGNNA--TLFNSGVMVIEPSN 480 Query: 480 ETXEKLI 500 T + L+ Sbjct: 481 CTFQLLM 487 Score = 32.7 bits (71), Expect = 0.27 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +2 Query: 521 SFDGGDQGLLNSFFFDWAHGDINKHLSFL 607 S++GGDQG LN F W H I KH++FL Sbjct: 495 SYNGGDQGYLNE-IFTWWH-RIPKHMNFL 521 Score = 31.5 bits (68), Expect = 0.61 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%) Frame = +1 Query: 64 AWVTLATNDS-YGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRA 210 A+ T+ + S Y GA+ A S+R+AGS V L+ T+S+ R L A Sbjct: 348 AYATILHSASEYVCGAISAAQSIRQAGSTRDLVILVDDTISDHHRKGLEA 397 >03_01_0598 + 4410722-4410988,4411112-4411745,4414612-4415555 Length = 614 Score = 60.9 bits (141), Expect = 9e-10 Identities = 30/68 (44%), Positives = 44/68 (64%) Frame = +3 Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479 ++K W LT Y++ VF+DADILV+++ D LF +L+A + G FNSGV V +PS Sbjct: 400 YSKFRLWQLTDYDRVVFVDADILVLRDLDALFGFPQLTAVGNDG--SLFNSGVMVIEPSQ 457 Query: 480 ETXEKLIQ 503 T + LI+ Sbjct: 458 CTFQSLIR 465 Score = 35.5 bits (78), Expect = 0.038 Identities = 19/37 (51%), Positives = 25/37 (67%) Frame = +1 Query: 76 LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSE 186 L ++D+Y GA+VLA S+RRAGS V L TVS+ Sbjct: 330 LHSSDTYLCGAIVLAQSIRRAGSTRDLVLLHDHTVSK 366 Score = 29.5 bits (63), Expect = 2.5 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%) Frame = +2 Query: 503 IRQQRG--SFDGGDQGLLNSFFFDW 571 IRQ+R S++GGDQG LN F W Sbjct: 464 IRQRRTIRSYNGGDQGFLNEVFVWW 488 >01_06_1550 + 38191957-38192054,38193084-38193284,38193456-38194090, 38194398-38195419 Length = 651 Score = 60.9 bits (141), Expect = 9e-10 Identities = 28/67 (41%), Positives = 43/67 (64%) Frame = +3 Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479 ++K W LT Y+K +F+DAD+L+++N D LF E++A + FNSGV V +PSN Sbjct: 398 YSKFRLWQLTDYDKIIFIDADLLILRNVDFLFAMPEITATGNNA--TLFNSGVMVIEPSN 455 Query: 480 ETXEKLI 500 T + L+ Sbjct: 456 CTFQLLM 462 Score = 32.7 bits (71), Expect = 0.27 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +2 Query: 521 SFDGGDQGLLNSFFFDWAHGDINKHLSFL 607 S++GGDQG LN F W H I KH++FL Sbjct: 470 SYNGGDQGYLNE-IFTWWH-RIPKHMNFL 496 Score = 31.1 bits (67), Expect = 0.81 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Frame = +1 Query: 64 AWVTLATNDS-YGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRA 210 A+ T+ + S Y GA+ A S+R+AGS V L+ T+S R L A Sbjct: 323 AYATILHSASEYVCGAITAAQSIRQAGSTRDFVILVDETISNHHRKGLEA 372 >02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345 Length = 654 Score = 52.8 bits (121), Expect = 2e-07 Identities = 28/67 (41%), Positives = 40/67 (59%) Frame = +3 Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479 ++K W+LT+Y++ VFLDAD+LV + LF E+SA + G FNSGV V +P Sbjct: 398 YSKFWLWSLTEYDRVVFLDADLLVQRPMSPLFAMPEVSATANHG--TLFNSGVMVVEPCG 455 Query: 480 ETXEKLI 500 T L+ Sbjct: 456 CTLRLLM 462 Score = 28.3 bits (60), Expect = 5.7 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 4/29 (13%) Frame = +2 Query: 521 SFDGGDQGLLNSFFFDW----AHGDINKH 595 S++GGDQG LN F W +H + KH Sbjct: 470 SYNGGDQGYLNEVFSWWHRLPSHANFMKH 498 >10_08_0883 + 21279913-21280235,21281066-21281327,21281998-21282199, 21282289-21282436,21282541-21283084 Length = 492 Score = 48.0 bits (109), Expect = 7e-06 Identities = 22/69 (31%), Positives = 40/69 (57%) Frame = +3 Query: 294 ITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKP 473 +T K++ W L YE+ V +D+D + +Q DELF+ + A P F++G+FV +P Sbjct: 139 LTLNKLYAWTLVDYERVVMIDSDNIFLQKTDELFQCGQFCAV--FINPCYFHTGLFVLQP 196 Query: 474 SNETXEKLI 500 S + + ++ Sbjct: 197 SMDVFKGML 205 >03_02_0800 + 11337206-11337532,11337634-11337957,11338060-11338194, 11338280-11338519 Length = 341 Score = 46.0 bits (104), Expect = 3e-05 Identities = 18/35 (51%), Positives = 24/35 (68%) Frame = +3 Query: 294 ITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFE 398 I ++K+ W +YE+ V+LDADI V N DELFE Sbjct: 100 INYSKLRIWEFVEYERMVYLDADIQVFDNIDELFE 134 >04_04_0739 - 27693768-27694305,27694765-27694912,27694987-27695188, 27695802-27695864,27695865-27696120,27697811-27697953 Length = 449 Score = 45.6 bits (103), Expect = 4e-05 Identities = 21/59 (35%), Positives = 36/59 (61%) Frame = +3 Query: 294 ITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFK 470 +T K++ W+L Y++ V LD+D + +QN DELF+ + A P F++G+FV + Sbjct: 77 LTLNKLYAWSLVSYDRVVMLDSDNIFLQNTDELFQCGQFCAV--FINPCIFHTGLFVLQ 133 >04_04_0516 + 25833801-25834046,25834412-25834532,25834636-25834821, 25834918-25834944,25836203-25836351,25836553-25836602, 25837181-25837289,25837395-25837532,25838184-25838463, 25838533-25838656,25838994-25839003 Length = 479 Score = 45.6 bits (103), Expect = 4e-05 Identities = 21/68 (30%), Positives = 42/68 (61%) Frame = +3 Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479 +TK+ +N+T Y K V+LDAD +V+++ ++LF+ + ++ + NSGV V +PS Sbjct: 109 YTKLKIFNMTSYRKVVYLDADTVVVKSIEDLFKCGKFCG--NLKHSERMNSGVMVVEPSE 166 Query: 480 ETXEKLIQ 503 + +++ Sbjct: 167 TVFKDMMR 174 >02_05_0007 + 24918163-24918420,24919360-24919410,24919411-24919480, 24919645-24919830,24920127-24920275,24921310-24921417, 24921501-24921638,24922574-24922853,24922924-24923047, 24923197-24923312,24923612-24923619 Length = 495 Score = 44.8 bits (101), Expect = 6e-05 Identities = 21/72 (29%), Positives = 42/72 (58%) Frame = +3 Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479 +TK+ +N+T Y+K +LDAD +V+++ +++F + A ++ + NSGV V +PS Sbjct: 113 YTKLKIFNMTSYKKVAYLDADTIVVKSIEDIFNCGKFCA--NLKHSERMNSGVMVVEPSE 170 Query: 480 ETXEKLIQFASS 515 ++ +S Sbjct: 171 TLFNDMMDKVNS 182 Score = 32.3 bits (70), Expect = 0.35 Identities = 19/51 (37%), Positives = 26/51 (50%) Frame = +1 Query: 58 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRA 210 + A+VTL D + LG VL S+R + V L++ VSE R L A Sbjct: 37 DEAYVTLLYGDEFVLGVRVLGKSIRDTDTSRDLVVLVSDGVSEYSRKLLEA 87 Score = 30.7 bits (66), Expect = 1.1 Identities = 11/22 (50%), Positives = 17/22 (77%) Frame = +2 Query: 521 SFDGGDQGLLNSFFFDWAHGDI 586 S+ GGDQG LNS++ D+A+ + Sbjct: 185 SYTGGDQGFLNSYYADFANSRV 206 >07_03_1743 - 29167078-29167290,29167389-29168159 Length = 327 Score = 43.2 bits (97), Expect = 2e-04 Identities = 16/38 (42%), Positives = 25/38 (65%) Frame = +3 Query: 294 ITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREE 407 I ++K+ W +YE+ V+LDADI V N D LF+ ++ Sbjct: 95 INYSKLRIWEFVEYERMVYLDADIQVFDNIDHLFDLDK 132 Score = 34.7 bits (76), Expect = 0.066 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +1 Query: 61 RAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 204 RA+VT LA + Y G + LA LRR S YP V + P V R +L Sbjct: 18 RAYVTFLAGDGDYWKGVVGLAKGLRRVRSAYPLVVAVLPDVPGEHRRKL 66 >02_05_1197 - 34908382-34908582,34908664-34908837,34909239-34909337, 34909444-34909644,34910229-34910336,34910498-34910882, 34911132-34911584,34911868-34912094,34912211-34912270 Length = 635 Score = 30.3 bits (65), Expect = 1.4 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%) Frame = +1 Query: 16 LELSHETTPGFIMSNR-AWVTLATNDSYGLGALVLAHSLRRAGSV-YPAVALITPTV-SE 186 + L+H TTP + NR + +A+N LGA H LR A +V P ++L T SE Sbjct: 299 VHLTHLTTPESVFHNRLGFAAVASNP---LGAAASGHLLRAASAVASPLLSLFASTFRSE 355 Query: 187 AMR-DRL 204 A R D+L Sbjct: 356 ANRLDKL 362 >10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223 Length = 254 Score = 28.7 bits (61), Expect = 4.3 Identities = 18/56 (32%), Positives = 26/56 (46%) Frame = -2 Query: 263 VSRSLESRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRAPKP 96 V S + T+ T + ARR+ L + + S + T PA+RS ST P P Sbjct: 176 VGCSPHAATAAATATATAARRKRLRHAHAMASTSDSDNSTSPAKRSFTPSTPPPPP 231 >01_06_0923 + 33044283-33044433,33044826-33045242,33046209-33046538, 33046806-33046876,33047283-33047357,33047435-33047578, 33047645-33047816,33047933-33048616,33048711-33048767, 33048850-33048956,33049485-33049610,33050221-33050295, 33050387-33050499,33050789-33050905,33051384-33051444, 33051690-33051763,33052267-33052388,33052472-33052620, 33053525-33053635,33053946-33054008,33054689-33054722, 33055253-33055375,33055971-33056033,33056130-33056196, 33056311-33056356,33056446-33056552,33056923-33056971, 33057208-33057273,33057544-33057630 Length = 1286 Score = 28.7 bits (61), Expect = 4.3 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -2 Query: 299 GDAELWPLEEGQVSRSLESRTSTVTTSE 216 G +LW LEE +V RSL S+ T+ E Sbjct: 178 GSIKLWDLEEAKVVRSLTGHRSSCTSVE 205 >06_02_0308 + 14124373-14124706,14124888-14124910 Length = 118 Score = 27.9 bits (59), Expect = 7.6 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +1 Query: 106 ALVLAHSLRRAGSVYPAVALITPTVSEA-MRDRLRAVF 216 +LVL L+ G + VA + P +SEA +R R +A+F Sbjct: 25 SLVLLQQLQLLGVLVVVVAGVAPGISEAQVRSRFKAIF 62 >01_05_0513 - 22864657-22867899 Length = 1080 Score = 27.9 bits (59), Expect = 7.6 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -3 Query: 145 PSRRGGANGPAPELPSRRSRLWPELP 68 P GG N P PE+P R P++P Sbjct: 172 PEGGGGDNAPPPEVPPEAPRDLPDIP 197 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,086,623 Number of Sequences: 37544 Number of extensions: 340066 Number of successful extensions: 1113 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1073 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1109 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1655832080 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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