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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1311
         (660 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_04_0376 - 20754386-20755392,20755683-20756320,20756433-207566...    61   9e-10
03_01_0598 + 4410722-4410988,4411112-4411745,4414612-4415555           61   9e-10
01_06_1550 + 38191957-38192054,38193084-38193284,38193456-381940...    61   9e-10
02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345     53   2e-07
10_08_0883 + 21279913-21280235,21281066-21281327,21281998-212821...    48   7e-06
03_02_0800 + 11337206-11337532,11337634-11337957,11338060-113381...    46   3e-05
04_04_0739 - 27693768-27694305,27694765-27694912,27694987-276951...    46   4e-05
04_04_0516 + 25833801-25834046,25834412-25834532,25834636-258348...    46   4e-05
02_05_0007 + 24918163-24918420,24919360-24919410,24919411-249194...    45   6e-05
07_03_1743 - 29167078-29167290,29167389-29168159                       43   2e-04
02_05_1197 - 34908382-34908582,34908664-34908837,34909239-349093...    30   1.4  
10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223     29   4.3  
01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465...    29   4.3  
06_02_0308 + 14124373-14124706,14124888-14124910                       28   7.6  
01_05_0513 - 22864657-22867899                                         28   7.6  

>05_04_0376 -
           20754386-20755392,20755683-20756320,20756433-20756627,
           20757730-20757795,20757942-20758007,20758402-20758445
          Length = 671

 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = +3

Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479
           ++K   W LT Y+K +F+DAD+L+++N D LF   E++A  +      FNSGV V +PSN
Sbjct: 423 YSKFRLWQLTDYDKIIFIDADLLILRNVDFLFAMPEITATGNNA--TLFNSGVMVIEPSN 480

Query: 480 ETXEKLI 500
            T + L+
Sbjct: 481 CTFQLLM 487



 Score = 32.7 bits (71), Expect = 0.27
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 521 SFDGGDQGLLNSFFFDWAHGDINKHLSFL 607
           S++GGDQG LN   F W H  I KH++FL
Sbjct: 495 SYNGGDQGYLNE-IFTWWH-RIPKHMNFL 521



 Score = 31.5 bits (68), Expect = 0.61
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +1

Query: 64  AWVTLATNDS-YGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRA 210
           A+ T+  + S Y  GA+  A S+R+AGS    V L+  T+S+  R  L A
Sbjct: 348 AYATILHSASEYVCGAISAAQSIRQAGSTRDLVILVDDTISDHHRKGLEA 397


>03_01_0598 + 4410722-4410988,4411112-4411745,4414612-4415555
          Length = 614

 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 30/68 (44%), Positives = 44/68 (64%)
 Frame = +3

Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479
           ++K   W LT Y++ VF+DADILV+++ D LF   +L+A  + G    FNSGV V +PS 
Sbjct: 400 YSKFRLWQLTDYDRVVFVDADILVLRDLDALFGFPQLTAVGNDG--SLFNSGVMVIEPSQ 457

Query: 480 ETXEKLIQ 503
            T + LI+
Sbjct: 458 CTFQSLIR 465



 Score = 35.5 bits (78), Expect = 0.038
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +1

Query: 76  LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSE 186
           L ++D+Y  GA+VLA S+RRAGS    V L   TVS+
Sbjct: 330 LHSSDTYLCGAIVLAQSIRRAGSTRDLVLLHDHTVSK 366



 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +2

Query: 503 IRQQRG--SFDGGDQGLLNSFFFDW 571
           IRQ+R   S++GGDQG LN  F  W
Sbjct: 464 IRQRRTIRSYNGGDQGFLNEVFVWW 488


>01_06_1550 +
           38191957-38192054,38193084-38193284,38193456-38194090,
           38194398-38195419
          Length = 651

 Score = 60.9 bits (141), Expect = 9e-10
 Identities = 28/67 (41%), Positives = 43/67 (64%)
 Frame = +3

Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479
           ++K   W LT Y+K +F+DAD+L+++N D LF   E++A  +      FNSGV V +PSN
Sbjct: 398 YSKFRLWQLTDYDKIIFIDADLLILRNVDFLFAMPEITATGNNA--TLFNSGVMVIEPSN 455

Query: 480 ETXEKLI 500
            T + L+
Sbjct: 456 CTFQLLM 462



 Score = 32.7 bits (71), Expect = 0.27
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = +2

Query: 521 SFDGGDQGLLNSFFFDWAHGDINKHLSFL 607
           S++GGDQG LN   F W H  I KH++FL
Sbjct: 470 SYNGGDQGYLNE-IFTWWH-RIPKHMNFL 496



 Score = 31.1 bits (67), Expect = 0.81
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +1

Query: 64  AWVTLATNDS-YGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRA 210
           A+ T+  + S Y  GA+  A S+R+AGS    V L+  T+S   R  L A
Sbjct: 323 AYATILHSASEYVCGAITAAQSIRQAGSTRDFVILVDETISNHHRKGLEA 372


>02_04_0222 - 21034183-21035920,21036484-21036687,21037323-21037345
          Length = 654

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 28/67 (41%), Positives = 40/67 (59%)
 Frame = +3

Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479
           ++K   W+LT+Y++ VFLDAD+LV +    LF   E+SA  + G    FNSGV V +P  
Sbjct: 398 YSKFWLWSLTEYDRVVFLDADLLVQRPMSPLFAMPEVSATANHG--TLFNSGVMVVEPCG 455

Query: 480 ETXEKLI 500
            T   L+
Sbjct: 456 CTLRLLM 462



 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 4/29 (13%)
 Frame = +2

Query: 521 SFDGGDQGLLNSFFFDW----AHGDINKH 595
           S++GGDQG LN  F  W    +H +  KH
Sbjct: 470 SYNGGDQGYLNEVFSWWHRLPSHANFMKH 498


>10_08_0883 +
           21279913-21280235,21281066-21281327,21281998-21282199,
           21282289-21282436,21282541-21283084
          Length = 492

 Score = 48.0 bits (109), Expect = 7e-06
 Identities = 22/69 (31%), Positives = 40/69 (57%)
 Frame = +3

Query: 294 ITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKP 473
           +T  K++ W L  YE+ V +D+D + +Q  DELF+  +  A      P  F++G+FV +P
Sbjct: 139 LTLNKLYAWTLVDYERVVMIDSDNIFLQKTDELFQCGQFCAV--FINPCYFHTGLFVLQP 196

Query: 474 SNETXEKLI 500
           S +  + ++
Sbjct: 197 SMDVFKGML 205


>03_02_0800 +
           11337206-11337532,11337634-11337957,11338060-11338194,
           11338280-11338519
          Length = 341

 Score = 46.0 bits (104), Expect = 3e-05
 Identities = 18/35 (51%), Positives = 24/35 (68%)
 Frame = +3

Query: 294 ITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFE 398
           I ++K+  W   +YE+ V+LDADI V  N DELFE
Sbjct: 100 INYSKLRIWEFVEYERMVYLDADIQVFDNIDELFE 134


>04_04_0739 -
           27693768-27694305,27694765-27694912,27694987-27695188,
           27695802-27695864,27695865-27696120,27697811-27697953
          Length = 449

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 21/59 (35%), Positives = 36/59 (61%)
 Frame = +3

Query: 294 ITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFK 470
           +T  K++ W+L  Y++ V LD+D + +QN DELF+  +  A      P  F++G+FV +
Sbjct: 77  LTLNKLYAWSLVSYDRVVMLDSDNIFLQNTDELFQCGQFCAV--FINPCIFHTGLFVLQ 133


>04_04_0516 +
           25833801-25834046,25834412-25834532,25834636-25834821,
           25834918-25834944,25836203-25836351,25836553-25836602,
           25837181-25837289,25837395-25837532,25838184-25838463,
           25838533-25838656,25838994-25839003
          Length = 479

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 21/68 (30%), Positives = 42/68 (61%)
 Frame = +3

Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479
           +TK+  +N+T Y K V+LDAD +V+++ ++LF+  +     ++   +  NSGV V +PS 
Sbjct: 109 YTKLKIFNMTSYRKVVYLDADTVVVKSIEDLFKCGKFCG--NLKHSERMNSGVMVVEPSE 166

Query: 480 ETXEKLIQ 503
              + +++
Sbjct: 167 TVFKDMMR 174


>02_05_0007 +
           24918163-24918420,24919360-24919410,24919411-24919480,
           24919645-24919830,24920127-24920275,24921310-24921417,
           24921501-24921638,24922574-24922853,24922924-24923047,
           24923197-24923312,24923612-24923619
          Length = 495

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 21/72 (29%), Positives = 42/72 (58%)
 Frame = +3

Query: 300 FTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSGVFVFKPSN 479
           +TK+  +N+T Y+K  +LDAD +V+++ +++F   +  A  ++   +  NSGV V +PS 
Sbjct: 113 YTKLKIFNMTSYKKVAYLDADTIVVKSIEDIFNCGKFCA--NLKHSERMNSGVMVVEPSE 170

Query: 480 ETXEKLIQFASS 515
                ++   +S
Sbjct: 171 TLFNDMMDKVNS 182



 Score = 32.3 bits (70), Expect = 0.35
 Identities = 19/51 (37%), Positives = 26/51 (50%)
 Frame = +1

Query: 58  NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRA 210
           + A+VTL   D + LG  VL  S+R   +    V L++  VSE  R  L A
Sbjct: 37  DEAYVTLLYGDEFVLGVRVLGKSIRDTDTSRDLVVLVSDGVSEYSRKLLEA 87



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 521 SFDGGDQGLLNSFFFDWAHGDI 586
           S+ GGDQG LNS++ D+A+  +
Sbjct: 185 SYTGGDQGFLNSYYADFANSRV 206


>07_03_1743 - 29167078-29167290,29167389-29168159
          Length = 327

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +3

Query: 294 ITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREE 407
           I ++K+  W   +YE+ V+LDADI V  N D LF+ ++
Sbjct: 95  INYSKLRIWEFVEYERMVYLDADIQVFDNIDHLFDLDK 132



 Score = 34.7 bits (76), Expect = 0.066
 Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 61  RAWVT-LATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 204
           RA+VT LA +  Y  G + LA  LRR  S YP V  + P V    R +L
Sbjct: 18  RAYVTFLAGDGDYWKGVVGLAKGLRRVRSAYPLVVAVLPDVPGEHRRKL 66


>02_05_1197 -
           34908382-34908582,34908664-34908837,34909239-34909337,
           34909444-34909644,34910229-34910336,34910498-34910882,
           34911132-34911584,34911868-34912094,34912211-34912270
          Length = 635

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
 Frame = +1

Query: 16  LELSHETTPGFIMSNR-AWVTLATNDSYGLGALVLAHSLRRAGSV-YPAVALITPTV-SE 186
           + L+H TTP  +  NR  +  +A+N    LGA    H LR A +V  P ++L   T  SE
Sbjct: 299 VHLTHLTTPESVFHNRLGFAAVASNP---LGAAASGHLLRAASAVASPLLSLFASTFRSE 355

Query: 187 AMR-DRL 204
           A R D+L
Sbjct: 356 ANRLDKL 362


>10_08_1020 - 22309900-22310361,22310455-22310697,22311164-22311223
          Length = 254

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/56 (32%), Positives = 26/56 (46%)
 Frame = -2

Query: 263 VSRSLESRTSTVTTSEKTARRRSLIASLTVGVMSATAGYTEPARRSEWASTRAPKP 96
           V  S  + T+  T +   ARR+ L  +  +   S +   T PA+RS   ST  P P
Sbjct: 176 VGCSPHAATAAATATATAARRKRLRHAHAMASTSDSDNSTSPAKRSFTPSTPPPPP 231


>01_06_0923 +
           33044283-33044433,33044826-33045242,33046209-33046538,
           33046806-33046876,33047283-33047357,33047435-33047578,
           33047645-33047816,33047933-33048616,33048711-33048767,
           33048850-33048956,33049485-33049610,33050221-33050295,
           33050387-33050499,33050789-33050905,33051384-33051444,
           33051690-33051763,33052267-33052388,33052472-33052620,
           33053525-33053635,33053946-33054008,33054689-33054722,
           33055253-33055375,33055971-33056033,33056130-33056196,
           33056311-33056356,33056446-33056552,33056923-33056971,
           33057208-33057273,33057544-33057630
          Length = 1286

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 299 GDAELWPLEEGQVSRSLESRTSTVTTSE 216
           G  +LW LEE +V RSL    S+ T+ E
Sbjct: 178 GSIKLWDLEEAKVVRSLTGHRSSCTSVE 205


>06_02_0308 + 14124373-14124706,14124888-14124910
          Length = 118

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +1

Query: 106 ALVLAHSLRRAGSVYPAVALITPTVSEA-MRDRLRAVF 216
           +LVL   L+  G +   VA + P +SEA +R R +A+F
Sbjct: 25  SLVLLQQLQLLGVLVVVVAGVAPGISEAQVRSRFKAIF 62


>01_05_0513 - 22864657-22867899
          Length = 1080

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 145 PSRRGGANGPAPELPSRRSRLWPELP 68
           P   GG N P PE+P    R  P++P
Sbjct: 172 PEGGGGDNAPPPEVPPEAPRDLPDIP 197


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,086,623
Number of Sequences: 37544
Number of extensions: 340066
Number of successful extensions: 1113
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1655832080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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