Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1311
(660 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein. 145 1e-34
U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein. 145 1e-34
U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein. 145 1e-34
CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein. 145 1e-34
BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein. 145 1e-34
BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein. 145 1e-34
AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein. 145 1e-34
AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein. 145 1e-34
U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein. 136 5e-32
U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein. 136 5e-32
U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein. 136 5e-32
U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein. 136 5e-32
DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein. 136 5e-32
BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein. 136 5e-32
AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein. 136 5e-32
U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon prot... 128 1e-29
U94361-1|AAB84376.1| 246|Homo sapiens glycogenin-2 protein. 69 1e-11
AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens ... 31 3.6
BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific pept... 31 4.8
AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific prot... 31 4.8
AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific prot... 31 4.8
AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific prot... 31 4.8
S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subuni... 30 8.4
BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance ... 30 8.4
BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for IM... 30 8.4
AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance ... 30 8.4
AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein. 30 8.4
AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein. 30 8.4
>X79537-1|CAA56073.1| 279|Homo sapiens glycogenin protein.
Length = 279
Score = 145 bits (351), Expect = 1e-34
Identities = 60/88 (68%), Positives = 75/88 (85%)
Frame = +3
Query: 255 AAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGW 434
+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REELSAAPD GW
Sbjct: 69 SAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGW 128
Query: 435 PDCFNSGVFVFKPSNETXEKLIQFASSE 518
PDCFNSGVFV++PS ET +L+ AS +
Sbjct: 129 PDCFNSGVFVYQPSVETYNQLLHLASEQ 156
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 503 IRQQRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ ++GSFDGGDQG+LN+FF WA DI KHL F+YN+++ + YSYLPA K
Sbjct: 152 LASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFK 202
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDS 249
VDVLDS
Sbjct: 61 VDVLDS 66
>U44131-1|AAB00114.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 145 bits (351), Expect = 1e-34
Identities = 60/88 (68%), Positives = 75/88 (85%)
Frame = +3
Query: 255 AAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGW 434
+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REELSAAPD GW
Sbjct: 69 SAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGW 128
Query: 435 PDCFNSGVFVFKPSNETXEKLIQFASSE 518
PDCFNSGVFV++PS ET +L+ AS +
Sbjct: 129 PDCFNSGVFVYQPSVETYNQLLHLASEQ 156
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 503 IRQQRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ ++GSFDGGDQG+LN+FF WA DI KHL F+YN+++ + YSYLPA K
Sbjct: 152 LASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFK 202
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDS 249
VDVLDS
Sbjct: 61 VDVLDS 66
>U31525-1|AAB09752.1| 333|Homo sapiens glycogenin protein.
Length = 333
Score = 145 bits (351), Expect = 1e-34
Identities = 60/88 (68%), Positives = 75/88 (85%)
Frame = +3
Query: 255 AAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGW 434
+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REELSAAPD GW
Sbjct: 69 SAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGW 128
Query: 435 PDCFNSGVFVFKPSNETXEKLIQFASSE 518
PDCFNSGVFV++PS ET +L+ AS +
Sbjct: 129 PDCFNSGVFVYQPSVETYNQLLHLASEQ 156
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 503 IRQQRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ ++GSFDGGDQG+LN+FF WA DI KHL F+YN+++ + YSYLPA K
Sbjct: 152 LASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFK 202
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDS 249
VDVLDS
Sbjct: 61 VDVLDS 66
>CR536547-1|CAG38784.1| 333|Homo sapiens GYG protein.
Length = 333
Score = 145 bits (351), Expect = 1e-34
Identities = 60/88 (68%), Positives = 75/88 (85%)
Frame = +3
Query: 255 AAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGW 434
+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REELSAAPD GW
Sbjct: 69 SAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGW 128
Query: 435 PDCFNSGVFVFKPSNETXEKLIQFASSE 518
PDCFNSGVFV++PS ET +L+ AS +
Sbjct: 129 PDCFNSGVFVYQPSVETYNQLLHLASEQ 156
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 503 IRQQRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ ++GSFDGGDQG+LN+FF WA DI KHL F+YN+++ + YSYLPA K
Sbjct: 152 LASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFK 202
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDS 249
VDVLDS
Sbjct: 61 VDVLDS 66
>BC031096-1|AAH31096.2| 331|Homo sapiens GYG1 protein protein.
Length = 331
Score = 145 bits (351), Expect = 1e-34
Identities = 60/88 (68%), Positives = 75/88 (85%)
Frame = +3
Query: 255 AAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGW 434
+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REELSAAPD GW
Sbjct: 67 SAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGW 126
Query: 435 PDCFNSGVFVFKPSNETXEKLIQFASSE 518
PDCFNSGVFV++PS ET +L+ AS +
Sbjct: 127 PDCFNSGVFVYQPSVETYNQLLHLASEQ 154
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 503 IRQQRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ ++GSFDGGDQG+LN+FF WA DI KHL F+YN+++ + YSYLPA K
Sbjct: 150 LASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFK 200
Score = 66.5 bits (155), Expect = 8e-11
Identities = 34/64 (53%), Positives = 44/64 (68%)
Frame = +1
Query: 58 NRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVD 237
++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+ VD
Sbjct: 1 DQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIMVD 60
Query: 238 VLDS 249
VLDS
Sbjct: 61 VLDS 64
>BC000033-1|AAH00033.1| 333|Homo sapiens GYG1 protein protein.
Length = 333
Score = 145 bits (351), Expect = 1e-34
Identities = 60/88 (68%), Positives = 75/88 (85%)
Frame = +3
Query: 255 AAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGW 434
+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REELSAAPD GW
Sbjct: 69 SAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGW 128
Query: 435 PDCFNSGVFVFKPSNETXEKLIQFASSE 518
PDCFNSGVFV++PS ET +L+ AS +
Sbjct: 129 PDCFNSGVFVYQPSVETYNQLLHLASEQ 156
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 503 IRQQRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ ++GSFDGGDQG+LN+FF WA DI KHL F+YN+++ + YSYLPA K
Sbjct: 152 LASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFK 202
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDS 249
VDVLDS
Sbjct: 61 VDVLDS 66
>AF087942-1|AAD52093.1| 350|Homo sapiens glycogenin-1L protein.
Length = 350
Score = 145 bits (351), Expect = 1e-34
Identities = 60/88 (68%), Positives = 75/88 (85%)
Frame = +3
Query: 255 AAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGW 434
+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REELSAAPD GW
Sbjct: 69 SAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGW 128
Query: 435 PDCFNSGVFVFKPSNETXEKLIQFASSE 518
PDCFNSGVFV++PS ET +L+ AS +
Sbjct: 129 PDCFNSGVFVYQPSVETYNQLLHLASEQ 156
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 503 IRQQRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ ++GSFDGGDQG+LN+FF WA DI KHL F+YN+++ + YSYLPA K
Sbjct: 152 LASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFK 202
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDS 249
VDVLDS
Sbjct: 61 VDVLDS 66
>AF065481-1|AAD31084.1| 333|Homo sapiens glycogenin-1 protein.
Length = 333
Score = 145 bits (351), Expect = 1e-34
Identities = 60/88 (68%), Positives = 75/88 (85%)
Frame = +3
Query: 255 AAHLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGW 434
+AHL L++RPELG+T TK+HCW+LTQY KCVF+DAD LV+ N D+LF+REELSAAPD GW
Sbjct: 69 SAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFDREELSAAPDPGW 128
Query: 435 PDCFNSGVFVFKPSNETXEKLIQFASSE 518
PDCFNSGVFV++PS ET +L+ AS +
Sbjct: 129 PDCFNSGVFVYQPSVETYNQLLHLASEQ 156
Score = 75.4 bits (177), Expect = 2e-13
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = +2
Query: 503 IRQQRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ ++GSFDGGDQG+LN+FF WA DI KHL F+YN+++ + YSYLPA K
Sbjct: 152 LASEQGSFDGGDQGILNTFFSSWATTDIRKHLPFIYNLSSISIYSYLPAFK 202
Score = 68.9 bits (161), Expect = 1e-11
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
M+++A+VTL TND+Y GALVL SL++ + V L TP VS++MR L VF EV+
Sbjct: 1 MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTTRRLVVLATPQVSDSMRKVLETVFDEVIM 60
Query: 232 VDVLDS 249
VDVLDS
Sbjct: 61 VDVLDS 66
>U94364-1|AAB84379.1| 461|Homo sapiens glycogenin-2 gamma protein.
Length = 461
Score = 136 bits (330), Expect = 5e-32
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = +3
Query: 261 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPD 440
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E SAAPD GWPD
Sbjct: 64 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPD 123
Query: 441 CFNSGVFVFKPSNETXEKLIQFA 509
CFNSGVFVF+PS T + L+Q A
Sbjct: 124 CFNSGVFVFQPSLHTHKLLLQHA 146
Score = 68.9 bits (161), Expect = 1e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 512 QRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ GSFDG DQGLLNSFF +W+ DI+KHL F+YN+++ Y+Y PA K
Sbjct: 148 EHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFK 195
Score = 54.0 bits (124), Expect = 5e-07
Identities = 30/59 (50%), Positives = 36/59 (61%)
Frame = +1
Query: 79 ATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVTVDVLDSRE 255
ATND Y GALVL SLRR V LITP VS +R L VF EV+ V+++DS +
Sbjct: 3 ATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIEVNLIDSAD 61
>U94363-1|AAB84378.1| 469|Homo sapiens glycogenin-2 beta protein.
Length = 469
Score = 136 bits (330), Expect = 5e-32
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = +3
Query: 261 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPD 440
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E SAAPD GWPD
Sbjct: 73 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPD 132
Query: 441 CFNSGVFVFKPSNETXEKLIQFA 509
CFNSGVFVF+PS T + L+Q A
Sbjct: 133 CFNSGVFVFQPSLHTHKLLLQHA 155
Score = 68.9 bits (161), Expect = 1e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 512 QRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ GSFDG DQGLLNSFF +W+ DI+KHL F+YN+++ Y+Y PA K
Sbjct: 157 EHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFK 204
Score = 62.9 bits (146), Expect = 1e-09
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
++++A+VTLATND Y GALVL SLRR V LITP VS +R L VF EV+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 232 VDVLDSRE 255
V+++DS +
Sbjct: 63 VNLIDSAD 70
>U94362-1|AAB84377.1| 501|Homo sapiens glycogenin-2 alpha protein.
Length = 501
Score = 136 bits (330), Expect = 5e-32
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = +3
Query: 261 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPD 440
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E SAAPD GWPD
Sbjct: 104 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPD 163
Query: 441 CFNSGVFVFKPSNETXEKLIQFA 509
CFNSGVFVF+PS T + L+Q A
Sbjct: 164 CFNSGVFVFQPSLHTHKLLLQHA 186
Score = 68.9 bits (161), Expect = 1e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 512 QRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ GSFDG DQGLLNSFF +W+ DI+KHL F+YN+++ Y+Y PA K
Sbjct: 188 EHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFK 235
Score = 65.3 bits (152), Expect = 2e-10
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +1
Query: 25 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 204
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 205 RAVFSEVVTVDVLDSRE 255
VF EV+ V+++DS +
Sbjct: 85 SKVFDEVIEVNLIDSAD 101
>U94360-1|AAB84375.1| 342|Homo sapiens glycogenin-2 delta protein.
Length = 342
Score = 136 bits (330), Expect = 5e-32
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = +3
Query: 261 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPD 440
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E SAAPD GWPD
Sbjct: 16 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPD 75
Query: 441 CFNSGVFVFKPSNETXEKLIQFA 509
CFNSGVFVF+PS T + L+Q A
Sbjct: 76 CFNSGVFVFQPSLHTHKLLLQHA 98
Score = 68.9 bits (161), Expect = 1e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 512 QRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ GSFDG DQGLLNSFF +W+ DI+KHL F+YN+++ Y+Y PA K
Sbjct: 100 EHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFK 147
>DQ424901-1|ABD83666.1| 430|Homo sapiens glycogenin 2 protein.
Length = 430
Score = 136 bits (330), Expect = 5e-32
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = +3
Query: 261 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPD 440
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E SAAPD GWPD
Sbjct: 104 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPD 163
Query: 441 CFNSGVFVFKPSNETXEKLIQFA 509
CFNSGVFVF+PS T + L+Q A
Sbjct: 164 CFNSGVFVFQPSLHTHKLLLQHA 186
Score = 68.9 bits (161), Expect = 1e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 512 QRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ GSFDG DQGLLNSFF +W+ DI+KHL F+YN+++ Y+Y PA K
Sbjct: 188 EHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFK 235
Score = 65.3 bits (152), Expect = 2e-10
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +1
Query: 25 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 204
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 205 RAVFSEVVTVDVLDSRE 255
VF EV+ V+++DS +
Sbjct: 85 SKVFDEVIEVNLIDSAD 101
>BC023152-1|AAH23152.1| 470|Homo sapiens glycogenin 2 protein.
Length = 470
Score = 136 bits (330), Expect = 5e-32
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = +3
Query: 261 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPD 440
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E SAAPD GWPD
Sbjct: 73 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPD 132
Query: 441 CFNSGVFVFKPSNETXEKLIQFA 509
CFNSGVFVF+PS T + L+Q A
Sbjct: 133 CFNSGVFVFQPSLHTHKLLLQHA 155
Score = 68.9 bits (161), Expect = 1e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 512 QRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ GSFDG DQGLLNSFF +W+ DI+KHL F+YN+++ Y+Y PA K
Sbjct: 157 EHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFK 204
Score = 62.9 bits (146), Expect = 1e-09
Identities = 34/68 (50%), Positives = 45/68 (66%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRLRAVFSEVVT 231
++++A+VTLATND Y GALVL SLRR V LITP VS +R L VF EV+
Sbjct: 3 VTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVILSKVFDEVIE 62
Query: 232 VDVLDSRE 255
V+++DS +
Sbjct: 63 VNLIDSAD 70
>AF179624-1|AAF61855.1| 501|Homo sapiens glycogenin 2 protein.
Length = 501
Score = 136 bits (330), Expect = 5e-32
Identities = 59/83 (71%), Positives = 67/83 (80%)
Frame = +3
Query: 261 HLALLQRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPD 440
HLA L+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E SAAPD GWPD
Sbjct: 104 HLAFLKRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPD 163
Query: 441 CFNSGVFVFKPSNETXEKLIQFA 509
CFNSGVFVF+PS T + L+Q A
Sbjct: 164 CFNSGVFVFQPSLHTHKLLLQHA 186
Score = 68.9 bits (161), Expect = 1e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 512 QRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ GSFDG DQGLLNSFF +W+ DI+KHL F+YN+++ Y+Y PA K
Sbjct: 188 EHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFK 235
Score = 65.3 bits (152), Expect = 2e-10
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +1
Query: 25 SHETTPGFIMSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALITPTVSEAMRDRL 204
S + G ++++A+VTLATND Y GALVL SLRR V LITP VS +R L
Sbjct: 25 SASQSAGMTVTDQAFVTLATNDIYCQGALVLGQSLRRHRLTRKLVVLITPQVSSLLRVIL 84
Query: 205 RAVFSEVVTVDVLDSRE 255
VF EV+ V+++DS +
Sbjct: 85 SKVFDEVIEVNLIDSAD 101
>U94358-1|AAB84374.1| 298|Homo sapiens glycogenin-2 epsilon
protein.
Length = 298
Score = 128 bits (310), Expect = 1e-29
Identities = 55/78 (70%), Positives = 63/78 (80%)
Frame = +3
Query: 276 QRPELGITFTKIHCWNLTQYEKCVFLDADILVIQNCDELFEREELSAAPDVGWPDCFNSG 455
+RPELG+T TK+HCW LT Y KCVFLDAD LV+ N DELF+R E SAAPD GWPDCFNSG
Sbjct: 1 KRPELGLTLTKLHCWTLTHYSKCVFLDADTLVLSNVDELFDRGEFSAAPDPGWPDCFNSG 60
Query: 456 VFVFKPSNETXEKLIQFA 509
VFVF+PS T + L+Q A
Sbjct: 61 VFVFQPSLHTHKLLLQHA 78
Score = 68.9 bits (161), Expect = 1e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 512 QRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ GSFDG DQGLLNSFF +W+ DI+KHL F+YN+++ Y+Y PA K
Sbjct: 80 EHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFK 127
>U94361-1|AAB84376.1| 246|Homo sapiens glycogenin-2 protein.
Length = 246
Score = 68.9 bits (161), Expect = 1e-11
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +2
Query: 512 QRGSFDGGDQGLLNSFFFDWAHGDINKHLSFLYNVTTAAFYSYLPALK 655
+ GSFDG DQGLLNSFF +W+ DI+KHL F+YN+++ Y+Y PA K
Sbjct: 6 EHGSFDGADQGLLNSFFRNWSTTDIHKHLPFIYNLSSNTMYTYSPAFK 53
>AK126091-1|BAC86434.1| 161|Homo sapiens protein ( Homo sapiens
cDNA FLJ44103 fis, clone TESTI4044084. ).
Length = 161
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 177 GRCDECYGRVHRAGAAERMGQHQSSQAVGVVCGQSYPCSI*HYEAGCS 34
G C + G+ +GA R QHQ+ + Q PC H AGCS
Sbjct: 22 GHCPQFQGKKQMSGARAR-AQHQAHSSQESTQCQVSPCPAWHPRAGCS 68
>BC050525-1|AAH50525.1| 785|Homo sapiens ubiquitin specific
peptidase 1 protein.
Length = 785
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AF117386-1|AAD11441.1| 785|Homo sapiens ubiquitin-specific
protease protein.
Length = 785
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>AB208893-1|BAD92130.1| 586|Homo sapiens ubiquitin specific
protease 1 variant protein.
Length = 586
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 363 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 402
>AB014458-1|BAA34703.1| 785|Homo sapiens ubiquitin specific
protease protein.
Length = 785
Score = 30.7 bits (66), Expect = 4.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 52 MSNRAWVTLATNDSYGLGALVLAHSLRRAGSVYPAVALIT 171
+S W T TNDSYGL A+V+ + + Y A +T
Sbjct: 562 LSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKVT 601
>S40369-1|AAB22591.1| 980|Homo sapiens glutamate receptor subunit
protein.
Length = 980
Score = 29.9 bits (64), Expect = 8.4
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 84 KRLLRLGSSGAGPFAPPRRLGVPCRST 164
+R+ L +SGAG APPR LGVP +T
Sbjct: 937 RRIQALRASGAG--APPRGLGVPAEAT 961
>BC038225-1|AAH38225.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>BC017666-1|AAH17666.1| 941|Homo sapiens Unknown (protein for
IMAGE:3913418) protein.
Length = 941
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AL162390-1|CAH73243.1| 1101|Homo sapiens structural maintenance of
chromosomes 5 protein.
Length = 1101
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AJ310550-1|CAC39247.1| 1101|Homo sapiens SMC5 protein protein.
Length = 1101
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 15 PSKRALPRDPSSEVPSKRKNSAPQLPLL 42
>AB011166-1|BAA25520.2| 1120|Homo sapiens KIAA0594 protein protein.
Length = 1120
Score = 29.9 bits (64), Expect = 8.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 145 PSRRGGANGPAPELPSRRSRLWPELPML 62
PS+R P+ E+PS+R P+LP+L
Sbjct: 34 PSKRALPRDPSSEVPSKRKNSAPQLPLL 61
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,940,132
Number of Sequences: 237096
Number of extensions: 1769078
Number of successful extensions: 6093
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6093
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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