Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1307
         (527 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    25   0.54 
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           24   0.95 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   6.7  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   6.7  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   6.7  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   6.7  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   6.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   6.7  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   6.7  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   6.7  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.9  

>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -3

Query: 408 VSPAFWSAAARTLHRQTCSS 349
           +SP F SAA RT  R+T SS
Sbjct: 114 LSPLFHSAAPRTASRETKSS 133


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 23.8 bits (49), Expect = 0.95
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +1

Query: 91  PRCLCSSRSSAPAPGHRRDS 150
           P   CS  SS+P P H  +S
Sbjct: 192 PTPTCSEASSSPTPSHSSES 211


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 432 THXERSAEYNLTGD 473
           TH E+SA YNL  D
Sbjct: 103 THMEKSAIYNLLHD 116


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 432 THXERSAEYNLTGD 473
           TH E+SA YNL  D
Sbjct: 103 THMEKSAIYNLLHD 116


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 366 GEEFVLQPTRTQEKHVLXRXXVTHXERSAEY 458
           G+   LQP R    H+      TH   S +Y
Sbjct: 71  GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 366 GEEFVLQPTRTQEKHVLXRXXVTHXERSAEY 458
           G+   LQP R    H+      TH   S +Y
Sbjct: 71  GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 366 GEEFVLQPTRTQEKHVLXRXXVTHXERSAEY 458
           G+   LQP R    H+      TH   S +Y
Sbjct: 71  GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 366 GEEFVLQPTRTQEKHVLXRXXVTHXERSAEY 458
           G+   LQP R    H+      TH   S +Y
Sbjct: 71  GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 366 GEEFVLQPTRTQEKHVLXRXXVTHXERSAEY 458
           G+   LQP R    H+      TH   S +Y
Sbjct: 71  GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 366 GEEFVLQPTRTQEKHVLXRXXVTHXERSAEY 458
           G+   LQP R    H+      TH   S +Y
Sbjct: 27  GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 57


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 366 GEEFVLQPTRTQEKHVLXRXXVTHXERSAEY 458
           G+   LQP R    H+      TH   S +Y
Sbjct: 71  GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 366 GEEFVLQPTRTQEKHVLXRXXVTHXERSAEY 458
           G+   LQP R    H+      TH   S +Y
Sbjct: 71  GDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +3

Query: 366 GEEFVLQPTRTQEKHVLXRXXVTHXERSAEY 458
           G+   LQP R    H+      TH   S +Y
Sbjct: 71  GDYTQLQPQRLAPTHLQSPNTQTHPSASCKY 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,486
Number of Sequences: 336
Number of extensions: 1926
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12782794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)