Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1307
(527 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 38 0.005
07_03_0131 - 14004278-14004712 31 0.57
09_02_0136 + 4747985-4748419 30 1.0
11_06_0514 - 24477720-24479915 30 1.3
09_02_0343 + 7514514-7514948 29 1.7
08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767 29 1.7
07_03_0132 - 14011468-14012124 29 2.3
02_03_0179 + 16025962-16026143,16026570-16026684,16026852-160270... 29 3.1
10_08_0042 - 14383143-14383628,14383647-14384609,14384697-143864... 28 4.0
08_01_0766 - 7401775-7402107,7402734-7402880,7403008-7403034 28 4.0
05_05_0263 - 23673014-23673697,23673772-23674188 28 4.0
03_02_0111 + 5688649-5688942 28 4.0
01_06_1749 - 39636951-39638102 28 4.0
11_01_0170 - 1373986-1374013,1374061-1374326,1374693-1374926,137... 28 5.3
10_08_0881 - 21268996-21269103,21269389-21269496,21269827-212699... 28 5.3
04_04_1065 + 30529555-30530076 28 5.3
03_03_0117 - 14583102-14583186,14585202-14585336,14585440-145856... 28 5.3
12_01_1046 - 10756062-10756326,10757618-10757782,10757901-107582... 27 7.1
06_01_0908 - 7006160-7007488 27 7.1
05_06_0109 - 25624241-25624290,25624648-25624687,25624959-256250... 27 7.1
05_06_0100 - 25576466-25576923,25577552-25577801,25577992-25578204 27 7.1
05_05_0255 + 23643568-23644761 27 7.1
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 27 7.1
04_04_1462 - 33769122-33769151,33769385-33769426,33769571-337701... 27 9.3
04_04_0589 + 26449184-26450500,26452220-26452310,26452428-264525... 27 9.3
04_04_0308 + 24286923-24286927,24288430-24288907,24288980-242890... 27 9.3
04_03_0241 - 13243938-13244453,13244538-13246334 27 9.3
03_02_0123 + 5745390-5745576,5745993-5746082,5746255-5746351,574... 27 9.3
01_03_0114 - 12649104-12649141,12650137-12650245,12650500-126506... 27 9.3
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 37.9 bits (84), Expect = 0.005
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = -1
Query: 293 ARVP*KTDIPYNKRTNSFVFF*LEI----PTEESQVMSFLRVSAMSRSEQQGLSRRCPGA 126
AR+P +TD N+ + L+ P VMS + + + +QQ G
Sbjct: 1781 ARLPGRTDNEIKNHWNTHIKKKLKKMGLDPVTHRPVMSLAQPDPLKQQQQQHEPSVSGGT 1840
Query: 125 GADDREEQRQRGPEAAR-HGPCVAASCAS 42
GADD+EE+ + P +A+ G AAS AS
Sbjct: 1841 GADDKEEEEEETPTSAQPQGVACAASSAS 1869
>07_03_0131 - 14004278-14004712
Length = 144
Score = 31.1 bits (67), Expect = 0.57
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 212 EESQVMSFLRVSAMSRSEQQGLSRRCPGAGADDREEQRQRGPEAARHG 69
+ES V + V A S Q G RR AGA++RE +R+ G
Sbjct: 36 DESGVAEPMEVVATSTGAQAGRQRRLEAAGAEEREGRRRERSSGGLRG 83
>09_02_0136 + 4747985-4748419
Length = 144
Score = 30.3 bits (65), Expect = 1.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 212 EESQVMSFLRVSAMSRSEQQGLSRRCPGAGADDREEQRQRGPEAARHG 69
+ES V+ V A S Q G RR AGA++RE +R+ G
Sbjct: 36 DESGVVEPREVVATSTGAQAGRQRRLEAAGAEEREGRRRERSSGGLRG 83
>11_06_0514 - 24477720-24479915
Length = 731
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -2
Query: 190 SCACLRCLGVSSKGCLGGVQAPAPTTARSRD 98
S CLRCL VSS G TTAR RD
Sbjct: 530 SSKCLRCLCVSSSAPAGNNDDDHGTTARERD 560
>09_02_0343 + 7514514-7514948
Length = 144
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 212 EESQVMSFLRVSAMSRSEQQGLSRRCPGAGADDREEQRQRGPEAARHG 69
+ES V V A S Q G RR AGA++RE +R+ G
Sbjct: 36 DESGVAEPREVVATSTGAQAGRQRRLEAAGAEEREGRRRERSSGGLRG 83
>08_01_0935 - 9218271-9219860,9219959-9220232,9220506-9221767
Length = 1041
Score = 29.5 bits (63), Expect = 1.7
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -3
Query: 399 AFWSAAARTLHRQTCSSPYSCPSHSV-TVTAEPSS*STRP 283
+F SAA +++ Q+ S+P CPS + T TA P S P
Sbjct: 172 SFSSAAVKSIIEQSLSAPSPCPSAAASTTTAGPGPLSPSP 211
>07_03_0132 - 14011468-14012124
Length = 218
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1
Query: 212 EESQVMSFLRVSAMSRSEQQGLSRRCPGAGADDREEQRQRGPEAARHG 69
+ES + V A S Q G RR AGA++RE +R+ G
Sbjct: 36 DESGIAEPREVVATSTGAQAGRQRRLEAAGAEEREGRRRERSSGGLRG 83
>02_03_0179 +
16025962-16026143,16026570-16026684,16026852-16027065,
16027346-16027397,16027411-16027696
Length = 282
Score = 28.7 bits (61), Expect = 3.1
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Frame = +1
Query: 22 RRTATHREAQLA---ATHGPCRAASGPRCLCSSRSSAPAPGHRRDSPC 156
RR HR A L A G C G R + SRSSA P R + C
Sbjct: 30 RRQQPHRPAPLRQPLAASGHCGGGRGARRVSRSRSSAAHPRGRLHAAC 77
>10_08_0042 -
14383143-14383628,14383647-14384609,14384697-14386443,
14387901-14388010,14388767-14389003
Length = 1180
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -2
Query: 187 CACLRCLGVSSKGC-LGGVQAPAPTTARSRDSAAQRQHGMVRASPRAAPLCGSRCGA 20
C C LG S GV +P + +R ++R+ G R PRA P C R A
Sbjct: 140 CCCSGVLGGSPPSSRTAGVSSPGLSPSRP----SKRRIGRARVQPRAPPPCDERRAA 192
>08_01_0766 - 7401775-7402107,7402734-7402880,7403008-7403034
Length = 168
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 164 SEQQGLSRRCPGAGADDREEQRQRGP 87
SE +G RR P G DD E R+R P
Sbjct: 141 SEGRGYRRRAPTWGVDDAERGRRRRP 166
>05_05_0263 - 23673014-23673697,23673772-23674188
Length = 366
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -2
Query: 406 FSCVLVGCSTNSSPPDLQQPVQLSVTFGNRHSGALFM 296
F+C L GC+T++ P L + + FG G +F+
Sbjct: 65 FACALAGCATHAFRPPLPADARTARYFGAYDGGWVFV 101
>03_02_0111 + 5688649-5688942
Length = 97
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 28 TATHREAQLAATHGPCRAASGPRCLCSSRSSAPAPGHRRDSP 153
TA A AA GP R G RC CS+ + P P + +P
Sbjct: 28 TALPLTAAAAAATGPHRRGRG-RCYCSASDAPPPPPYVLTTP 68
>01_06_1749 - 39636951-39638102
Length = 383
Score = 28.3 bits (60), Expect = 4.0
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +1
Query: 37 HREAQLAATHGPCRAASGPRCLCSSRSSAPAPGHR-RDS----PCCSL-RDIADTRKK 192
H +A+L A G CR P LCS S PAP R RDS P C + +D+ + K
Sbjct: 243 HYDAELDAWVGICRHPDKPGRLCS--SDVPAPRIRGRDSRWRVPSCKIGKDVLFCKDK 298
>11_01_0170 -
1373986-1374013,1374061-1374326,1374693-1374926,
1375034-1375171,1375255-1375557,1376008-1376172,
1376469-1376933
Length = 532
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 128 AGADDREEQRQRGPEAARHGPCVAAS 51
AG E +R+RG E AR+G C S
Sbjct: 81 AGCRGGEARRERGREVARNGSCAGGS 106
>10_08_0881 -
21268996-21269103,21269389-21269496,21269827-21269916,
21270010-21270246,21270335-21270901
Length = 369
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +1
Query: 1 RRCVSAARRTATHREAQLAATHGPCRAASGPRCLCSSRSSAPA-PGHRRDSPCCSLRDIA 177
RR +S+ T E AA GP A PR S SS+P G R S LRD+
Sbjct: 89 RRALSSKENTV--HELGTAAARGPWEPARRPRRSSSGGSSSPENAGSTRGS--AVLRDMM 144
Query: 178 DTRKK 192
RK+
Sbjct: 145 TRRKE 149
>04_04_1065 + 30529555-30530076
Length = 173
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 106 SSRSSAPAPGHRRDSPCCSLRDIADTRK 189
++RS APAPG RR P + + T+K
Sbjct: 145 ATRSRAPAPGRRRGRPGVTKKHTGGTKK 172
>03_03_0117 -
14583102-14583186,14585202-14585336,14585440-14585604,
14586168-14586245,14586796-14586941
Length = 202
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 91 PRCLCSSRSSAPAPGHRRDSPCCSLRDIADTRKKLITCDSSV 216
PR SRS +PAP + S C + DT K +I C SV
Sbjct: 155 PRSRSRSRSYSPAPKRKHYSSCFA----GDTDKFMILCRKSV 192
>12_01_1046 -
10756062-10756326,10757618-10757782,10757901-10758206,
10758279-10758377,10760555-10760670,10760756-10760848,
10760946-10761107,10761784-10762170
Length = 530
Score = 27.5 bits (58), Expect = 7.1
Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +1
Query: 1 RRCVSAARRTATHREAQLAATHGPCRAASG-PRCLCSSRSSAPAPGHRRDSP 153
R VSA+ A AA G AAS RCL +S S+APA R P
Sbjct: 46 RLAVSASSAGAGAASPSPAAGWGRSDAASSLERCLAASGSAAPASAPTRAPP 97
>06_01_0908 - 7006160-7007488
Length = 442
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = -1
Query: 185 RVSAMSRSEQQGLSRRCPGAGADDREEQRQRGPEAARHGPCVAASC 48
R MSR Q RR PG DR+E+ P AAR + A+C
Sbjct: 14 RSKPMSRQRTQEALRRAPGDSEVDRKEK----PWAARWKASLIATC 55
>05_06_0109 -
25624241-25624290,25624648-25624687,25624959-25625031,
25625123-25625200,25625533-25625569,25625892-25625952,
25626110-25626328,25626400-25626456
Length = 204
Score = 27.5 bits (58), Expect = 7.1
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -3
Query: 66 VRRRELRLSVGRGAARCAHAST 1
V R++L++ G+ A++CAHA+T
Sbjct: 95 VVRKDLKMRAGKIASQCAHAAT 116
>05_06_0100 - 25576466-25576923,25577552-25577801,25577992-25578204
Length = 306
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 76 RAASGPRCLCSSRSSAPAPGHRRDSPCCSLRDIAD 180
RAA+ C C+SR +A A C+LR +A+
Sbjct: 96 RAAAAGACSCASRGAAAAAAGSGGCRSCTLRFLAE 130
>05_05_0255 + 23643568-23644761
Length = 397
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -2
Query: 442 SLCVTXXRXNTCFSCVLVGCSTNSSPPDLQQPVQLSVTFGNRHSGALFM 296
S+ V CF+C L GC+T++ L + FG G +F+
Sbjct: 55 SILVPRADDGHCFACALAGCATHAFGHPLPADALAARYFGAYDGGWVFV 103
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 27.5 bits (58), Expect = 7.1
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 61 THGP-CRAASGPRCLCSSRSSAPAPGHRRDSPCCSLRDIADTRKK 192
+HG R+ S R L SRS +P P H R SP SL ++ K
Sbjct: 736 SHGDRSRSMSRSRSLSGSRSRSPPPIHNR-SPLASLSPKRESNAK 779
>04_04_1462 -
33769122-33769151,33769385-33769426,33769571-33770158,
33770398-33770508,33770585-33770625,33771238-33771382,
33771578-33771781,33772626-33772769,33772991-33773183,
33774559-33774602,33774694-33774822,33774907-33774954,
33775058-33775120,33775198-33775236,33776694-33776767,
33777460-33777518,33777709-33777768,33777920-33778044,
33778693-33778751,33779418-33779511,33779572-33779625,
33779775-33779813,33780423-33780602
Length = 854
Score = 27.1 bits (57), Expect = 9.3
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = +1
Query: 13 SAARRTATHREAQLAATHGPCRAASGPRCLCSSRSSAPAPGHRRDSPCCSL 165
S + +++ +LAA A+S P C C R S A S CC L
Sbjct: 370 STSSSSSSRTRRKLAAGGLERAASSRPPCCCGDRRSRAAGDPHGRSSCCYL 420
>04_04_0589 +
26449184-26450500,26452220-26452310,26452428-26452585,
26452670-26452768,26453296-26453345,26453654-26453705,
26453773-26454058,26454286-26454400,26454938-26455020,
26455381-26455466
Length = 778
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -1
Query: 146 SRRCPGAGADDREEQRQRGPEAARHGPCVAASCASLWVA 30
S C A D ++ +RG +AA AA+ +W +
Sbjct: 24 SSSCSSTSASDDDDHPRRGRDAAAAAAAAAAAALDVWTS 62
>04_04_0308 +
24286923-24286927,24288430-24288907,24288980-24289099,
24289182-24289235,24289467-24289579,24289799-24290011,
24290123-24290201,24290323-24290376,24290448-24290522,
24291029-24291193,24291843-24291941,24292186-24292241,
24292331-24292433,24293289-24293417,24293657-24293835,
24293953-24293977,24294060-24294175,24294252-24294342
Length = 717
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -2
Query: 337 SVTFGNRHSGALFMKHASRKKLTFLIISERIALFSFNLRSQP 212
++T + HSG L +R ++ L S +I +FS+N QP
Sbjct: 368 NITAKSYHSGLLIK---NRSRVQELFCSNKIRVFSYNFTEQP 406
>04_03_0241 - 13243938-13244453,13244538-13246334
Length = 770
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 170 SRSEQQGLSRRCPGAGADDREEQRQRGPEAARHG 69
SR E+ G G DDR ++ +RG + R G
Sbjct: 315 SREERNGRDENDDRGGRDDRGDRDERGERSVRDG 348
>03_02_0123 +
5745390-5745576,5745993-5746082,5746255-5746351,
5746446-5746584
Length = 170
Score = 27.1 bits (57), Expect = 9.3
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 76 GMVRASPRAAPLCGSRCGA 20
G+V ASP AP C RC A
Sbjct: 6 GLVAASPVTAPRCRGRCSA 24
>01_03_0114 -
12649104-12649141,12650137-12650245,12650500-12650691,
12650797-12650904,12650986-12651162,12652331-12652459,
12653314-12653589,12653667-12653916,12654909-12655561
Length = 643
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 179 SAMSRSEQQGLSRRCPGAGADDR 111
S+ +R E GLS RCP G DR
Sbjct: 189 SSWTREEGWGLSERCPPVGDADR 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,506,880
Number of Sequences: 37544
Number of extensions: 269374
Number of successful extensions: 1317
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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