Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1307
         (527 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   1.6  
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    23   6.3  
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    23   6.3  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   8.4  

>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 137 CPGAGADDREEQRQRGPEAARHGP 66
           C G G  D E+  QR  E   H P
Sbjct: 295 CGGGGGSDSEDLPQRSAEDRTHSP 318


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 420 VVTRVSPAFWSAAARTLHRQTCSSPYSCPSHSVTVTAEPSS*STR 286
           V+TR +P+    A  +     CSS +S PS      A  +S STR
Sbjct: 45  VMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRCAPARTASCSTR 89


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 21/71 (29%), Positives = 28/71 (39%)
 Frame = -2

Query: 220  SQPRSRK**VSCACLRCLGVSSKGCLGGVQAPAPTTARSRDSAAQRQHGMVRASPRAAPL 41
            SQ RSR    S +  R    S  G   G +A + + +RSR  +  R         R+   
Sbjct: 1061 SQRRSRSRSRSGSGSRSRSRSGSGSRAGSRAGSGSRSRSRSRSRSRSRSGSAKGSRSRSR 1120

Query: 40   CGSRCGALRSR 8
             GS     RSR
Sbjct: 1121 SGSGGSRSRSR 1131


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -1

Query: 170 SRSEQQGLSRRCPGAGADDREEQRQRGPE 84
           SR  +QG     P    DDR  +RQR  E
Sbjct: 839 SRHTRQGSEASSPPPFLDDRSLKRQRSLE 867


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 490,557
Number of Sequences: 2352
Number of extensions: 8380
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)