Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1307
(527 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK074886-1|BAC11267.1| 207|Homo sapiens protein ( Homo sapiens ... 34 0.36
BC108253-1|AAI08254.1| 327|Homo sapiens immediate early respons... 32 1.4
BC034498-1|AAH34498.1| 209|Homo sapiens WDR26 protein protein. 32 1.4
BC000128-1|AAH00128.1| 327|Homo sapiens immediate early respons... 32 1.4
AL356267-6|CAH72306.1| 327|Homo sapiens immediate early respons... 32 1.4
AJ251089-1|CAB91983.1| 327|Homo sapiens hypothetical protein pr... 32 1.4
AF258581-1|AAG23784.1| 327|Homo sapiens PP4583 protein. 32 1.4
AF178984-1|AAF44348.1| 327|Homo sapiens hypothetical protein SB... 32 1.4
AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26 var... 32 1.4
BC019261-1|AAH19261.1| 492|Homo sapiens GTP binding protein 3 (... 31 3.3
BC017207-1|AAH17207.1| 492|Homo sapiens GTP binding protein 3 (... 31 3.3
AY078988-1|AAL85493.1| 492|Homo sapiens GTP-binding protein iso... 31 3.3
AY078987-1|AAL85492.1| 524|Homo sapiens GTP-binding protein iso... 31 3.3
AK027606-1|BAB55228.1| 492|Homo sapiens protein ( Homo sapiens ... 31 3.3
AF361481-1|AAK37568.1| 492|Homo sapiens mitochondrial GTP-bindi... 31 3.3
AF360744-1|AAK39557.1| 471|Homo sapiens mitochondrial GTP bindi... 31 3.3
AF360743-1|AAK39556.1| 471|Homo sapiens mitochondrial GTP bindi... 31 3.3
AF360742-1|AAK39555.1| 492|Homo sapiens mitochondrial GTP bindi... 31 3.3
AB033062-1|BAA86550.2| 1840|Homo sapiens KIAA1236 protein protein. 30 4.4
AJ311904-1|CAC84565.1| 1207|Homo sapiens ADAMTS-19 protein. 30 5.8
>AK074886-1|BAC11267.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ90405 fis, clone NT2RP2006099. ).
Length = 207
Score = 33.9 bits (74), Expect = 0.36
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 7 CVSAARRTATHREAQLAATHGPCRAASGPRCLCSSRSSAPAPGHRRDSPCCSLRDIA 177
C AR + R+ AT GP R+ PRC R+ P+P R D+P ++R +A
Sbjct: 62 CPRCARAASRGRQR---ATSGPRRSPRRPRCPAPRRADPPSP--RSDTPISAVRPLA 113
>BC108253-1|AAI08254.1| 327|Homo sapiens immediate early response 5
protein.
Length = 327
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 212 EESQVMSFLRVSAMSRSEQQGLSRRCPGAGADDREEQRQRGPEAARHG 69
EE + + + ++ S GL R+ PG G ++ EE + GPEAA G
Sbjct: 259 EEMETGNVANLISIFGSSFSGLLRKSPGGGREE-EEGEESGPEAAEPG 305
>BC034498-1|AAH34498.1| 209|Homo sapiens WDR26 protein protein.
Length = 209
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 173 SQTRARNSSLATPRLGSQVKRKQSYS 250
S T A +SSLATP LGS +K+K+ S
Sbjct: 89 SATTAASSSLATPELGSSLKKKKRLS 114
>BC000128-1|AAH00128.1| 327|Homo sapiens immediate early response 5
protein.
Length = 327
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 212 EESQVMSFLRVSAMSRSEQQGLSRRCPGAGADDREEQRQRGPEAARHG 69
EE + + + ++ S GL R+ PG G ++ EE + GPEAA G
Sbjct: 259 EEMETGNVANLISIFGSSFSGLLRKSPGGGREE-EEGEESGPEAAEPG 305
>AL356267-6|CAH72306.1| 327|Homo sapiens immediate early response 5
protein.
Length = 327
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 212 EESQVMSFLRVSAMSRSEQQGLSRRCPGAGADDREEQRQRGPEAARHG 69
EE + + + ++ S GL R+ PG G ++ EE + GPEAA G
Sbjct: 259 EEMETGNVANLISIFGSSFSGLLRKSPGGGREE-EEGEESGPEAAEPG 305
>AJ251089-1|CAB91983.1| 327|Homo sapiens hypothetical protein
protein.
Length = 327
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 212 EESQVMSFLRVSAMSRSEQQGLSRRCPGAGADDREEQRQRGPEAARHG 69
EE + + + ++ S GL R+ PG G ++ EE + GPEAA G
Sbjct: 259 EEMETGNVANLISIFGSSFSGLLRKSPGGGREE-EEGEESGPEAAEPG 305
>AF258581-1|AAG23784.1| 327|Homo sapiens PP4583 protein.
Length = 327
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 212 EESQVMSFLRVSAMSRSEQQGLSRRCPGAGADDREEQRQRGPEAARHG 69
EE + + + ++ S GL R+ PG G ++ EE + GPEAA G
Sbjct: 259 EEMETGNVANLISIFGSSFSGLLRKSPGGGREE-EEGEESGPEAAEPG 305
>AF178984-1|AAF44348.1| 327|Homo sapiens hypothetical protein
SBBI48 protein.
Length = 327
Score = 31.9 bits (69), Expect = 1.4
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 212 EESQVMSFLRVSAMSRSEQQGLSRRCPGAGADDREEQRQRGPEAARHG 69
EE + + + ++ S GL R+ PG G ++ EE + GPEAA G
Sbjct: 259 EEMETGNVANLISIFGSSFSGLLRKSPGGGREE-EEGEESGPEAAEPG 305
>AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26
variant protein.
Length = 725
Score = 31.9 bits (69), Expect = 1.4
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 173 SQTRARNSSLATPRLGSQVKRKQSYS 250
S T A +SSLATP LGS +K+K+ S
Sbjct: 160 SATTAASSSLATPELGSSLKKKKRLS 185
>BC019261-1|AAH19261.1| 492|Homo sapiens GTP binding protein 3
(mitochondrial) protein.
Length = 492
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +1
Query: 76 RAASGPRCLCSSRSS-APAPG 135
+AA GPR LC+ RSS APAPG
Sbjct: 11 QAARGPRRLCTRRSSGAPAPG 31
>BC017207-1|AAH17207.1| 492|Homo sapiens GTP binding protein 3
(mitochondrial) protein.
Length = 492
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +1
Query: 76 RAASGPRCLCSSRSS-APAPG 135
+AA GPR LC+ RSS APAPG
Sbjct: 11 QAARGPRRLCTRRSSGAPAPG 31
>AY078988-1|AAL85493.1| 492|Homo sapiens GTP-binding protein
isoform V protein.
Length = 492
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +1
Query: 76 RAASGPRCLCSSRSS-APAPG 135
+AA GPR LC+ RSS APAPG
Sbjct: 11 QAARGPRRLCTRRSSGAPAPG 31
>AY078987-1|AAL85492.1| 524|Homo sapiens GTP-binding protein
isoform IV protein.
Length = 524
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +1
Query: 76 RAASGPRCLCSSRSS-APAPG 135
+AA GPR LC+ RSS APAPG
Sbjct: 11 QAARGPRRLCTRRSSGAPAPG 31
>AK027606-1|BAB55228.1| 492|Homo sapiens protein ( Homo sapiens
cDNA FLJ14700 fis, clone NT2RP3000046, weakly similar to
MITOCHONDRIAL GTPASE MSS1 PRECURSOR. ).
Length = 492
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +1
Query: 76 RAASGPRCLCSSRSS-APAPG 135
+AA GPR LC+ RSS APAPG
Sbjct: 11 QAARGPRRLCTRRSSGAPAPG 31
>AF361481-1|AAK37568.1| 492|Homo sapiens mitochondrial GTP-binding
protein 1 protein.
Length = 492
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +1
Query: 76 RAASGPRCLCSSRSS-APAPG 135
+AA GPR LC+ RSS APAPG
Sbjct: 11 QAARGPRRLCTRRSSGAPAPG 31
>AF360744-1|AAK39557.1| 471|Homo sapiens mitochondrial GTP binding
protein 3 protein.
Length = 471
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +1
Query: 76 RAASGPRCLCSSRSS-APAPG 135
+AA GPR LC+ RSS APAPG
Sbjct: 11 QAARGPRRLCTRRSSGAPAPG 31
>AF360743-1|AAK39556.1| 471|Homo sapiens mitochondrial GTP binding
protein 2 protein.
Length = 471
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +1
Query: 76 RAASGPRCLCSSRSS-APAPG 135
+AA GPR LC+ RSS APAPG
Sbjct: 11 QAARGPRRLCTRRSSGAPAPG 31
>AF360742-1|AAK39555.1| 492|Homo sapiens mitochondrial GTP binding
protein 1 protein.
Length = 492
Score = 30.7 bits (66), Expect = 3.3
Identities = 15/21 (71%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +1
Query: 76 RAASGPRCLCSSRSS-APAPG 135
+AA GPR LC+ RSS APAPG
Sbjct: 11 QAARGPRRLCTRRSSGAPAPG 31
>AB033062-1|BAA86550.2| 1840|Homo sapiens KIAA1236 protein protein.
Length = 1840
Score = 30.3 bits (65), Expect = 4.4
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = -2
Query: 142 GGVQAPAPTTARSRDSAAQRQHGMVRASPRAAPLCGSRCGALRSR 8
GG +A P+ S S R G A PRAAP G GA R
Sbjct: 1464 GGSRALGPSVKLSTASVTGRSPGGPVAGPRAAPRAGPSVGAKAGR 1508
>AJ311904-1|CAC84565.1| 1207|Homo sapiens ADAMTS-19 protein.
Length = 1207
Score = 29.9 bits (64), Expect = 5.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 275 FFTGRVLHEEGSAVTVTECDGQLYGLLQV 361
F+TG VL GS + + C G L G +Q+
Sbjct: 221 FYTGAVLRHPGSLASFSTCGGGLMGFIQL 249
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,758,195
Number of Sequences: 237096
Number of extensions: 1296035
Number of successful extensions: 5321
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5315
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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