BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1307 (527 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT030413-1|ABO52833.1| 314|Drosophila melanogaster IP10008p pro... 33 0.18 AE014297-1346|AAN13523.1| 267|Drosophila melanogaster CG32852-P... 33 0.18 BT021215-1|AAX33363.1| 399|Drosophila melanogaster RH65810p pro... 30 1.7 AE014298-2043|AAN09339.1| 541|Drosophila melanogaster CG9413-PB... 30 1.7 AE014298-2042|AAF48379.2| 532|Drosophila melanogaster CG9413-PA... 30 1.7 BT009941-1|AAQ22410.1| 1345|Drosophila melanogaster SD04170p pro... 29 3.0 AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone rece... 29 5.2 AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ... 29 5.2 AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC... 29 5.2 >BT030413-1|ABO52833.1| 314|Drosophila melanogaster IP10008p protein. Length = 314 Score = 33.5 bits (73), Expect = 0.18 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = +1 Query: 28 TATHREAQLAATHGP----CRAASGPRCLCSSRSSAPAPGHRRDSPCC 159 + TH+EA ATH RA P LCSS S+A AP RR+ C Sbjct: 129 SVTHKEASTHATHTGGQVISRARRKPILLCSSLSAAYAPPRRREFYFC 176 >AE014297-1346|AAN13523.1| 267|Drosophila melanogaster CG32852-PA protein. Length = 267 Score = 33.5 bits (73), Expect = 0.18 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%) Frame = +1 Query: 28 TATHREAQLAATHGP----CRAASGPRCLCSSRSSAPAPGHRRDSPCC 159 + TH+EA ATH RA P LCSS S+A AP RR+ C Sbjct: 129 SVTHKEASTHATHTGGQVISRARRKPILLCSSLSAAYAPPRRREFYFC 176 >BT021215-1|AAX33363.1| 399|Drosophila melanogaster RH65810p protein. Length = 399 Score = 30.3 bits (65), Expect = 1.7 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 Query: 445 RSLCVTXXRXNTCFSCVLVGCSTNSSPPDLQQPVQLSVTFGNRHSGAL 302 RS+ + C++ + + SP ++ + ++VTFGNR GAL Sbjct: 299 RSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGAL 346 >AE014298-2043|AAN09339.1| 541|Drosophila melanogaster CG9413-PB, isoform B protein. Length = 541 Score = 30.3 bits (65), Expect = 1.7 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 Query: 445 RSLCVTXXRXNTCFSCVLVGCSTNSSPPDLQQPVQLSVTFGNRHSGAL 302 RS+ + C++ + + SP ++ + ++VTFGNR GAL Sbjct: 308 RSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGAL 355 >AE014298-2042|AAF48379.2| 532|Drosophila melanogaster CG9413-PA, isoform A protein. Length = 532 Score = 30.3 bits (65), Expect = 1.7 Identities = 14/48 (29%), Positives = 25/48 (52%) Frame = -2 Query: 445 RSLCVTXXRXNTCFSCVLVGCSTNSSPPDLQQPVQLSVTFGNRHSGAL 302 RS+ + C++ + + SP ++ + ++VTFGNR GAL Sbjct: 299 RSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGAL 346 >BT009941-1|AAQ22410.1| 1345|Drosophila melanogaster SD04170p protein. Length = 1345 Score = 29.5 bits (63), Expect = 3.0 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = +3 Query: 321 LPNVTDSCTGCCRSGGEEFVLQPTR---TQEKHVLXRXXVTHXERSAEYNLTGDTVI 482 LPN + C CCRS G+ + +P Q+ + R V+H + AE + G+T++ Sbjct: 792 LPNSWE-CPSCCRS-GKNYDYKPRHFRARQKSSEVRRVSVSHGQGGAEGHADGNTLL 846 >AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone receptor 4 protein. Length = 1518 Score = 28.7 bits (61), Expect = 5.2 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = -2 Query: 178 LRCLGVSSKGCLGGVQAPAPTTARSRDSAAQRQHGMVRASPRAAP--LCGSRCG 23 LR +GV G VQ P+P + S S+ + PR P + G CG Sbjct: 669 LRPVGVGGGNGSGSVQCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG 722 >AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 protein. Length = 1464 Score = 28.7 bits (61), Expect = 5.2 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = -2 Query: 178 LRCLGVSSKGCLGGVQAPAPTTARSRDSAAQRQHGMVRASPRAAP--LCGSRCG 23 LR +GV G VQ P+P + S S+ + PR P + G CG Sbjct: 614 LRPVGVGGGNGSGSVQCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG 667 >AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC protein. Length = 1518 Score = 28.7 bits (61), Expect = 5.2 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Frame = -2 Query: 178 LRCLGVSSKGCLGGVQAPAPTTARSRDSAAQRQHGMVRASPRAAP--LCGSRCG 23 LR +GV G VQ P+P + S S+ + PR P + G CG Sbjct: 669 LRPVGVGGGNGSGSVQCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG 722 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,709,828 Number of Sequences: 53049 Number of extensions: 421375 Number of successful extensions: 1559 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1450 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1552 length of database: 24,988,368 effective HSP length: 80 effective length of database: 20,744,448 effective search space used: 1970722560 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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