Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1307
         (527 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030413-1|ABO52833.1|  314|Drosophila melanogaster IP10008p pro...    33   0.18 
AE014297-1346|AAN13523.1|  267|Drosophila melanogaster CG32852-P...    33   0.18 
BT021215-1|AAX33363.1|  399|Drosophila melanogaster RH65810p pro...    30   1.7  
AE014298-2043|AAN09339.1|  541|Drosophila melanogaster CG9413-PB...    30   1.7  
AE014298-2042|AAF48379.2|  532|Drosophila melanogaster CG9413-PA...    30   1.7  
BT009941-1|AAQ22410.1| 1345|Drosophila melanogaster SD04170p pro...    29   3.0  
AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone rece...    29   5.2  
AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ...    29   5.2  
AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC...    29   5.2  

>BT030413-1|ABO52833.1|  314|Drosophila melanogaster IP10008p
           protein.
          Length = 314

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 28  TATHREAQLAATHGP----CRAASGPRCLCSSRSSAPAPGHRRDSPCC 159
           + TH+EA   ATH       RA   P  LCSS S+A AP  RR+   C
Sbjct: 129 SVTHKEASTHATHTGGQVISRARRKPILLCSSLSAAYAPPRRREFYFC 176


>AE014297-1346|AAN13523.1|  267|Drosophila melanogaster CG32852-PA
           protein.
          Length = 267

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 28  TATHREAQLAATHGP----CRAASGPRCLCSSRSSAPAPGHRRDSPCC 159
           + TH+EA   ATH       RA   P  LCSS S+A AP  RR+   C
Sbjct: 129 SVTHKEASTHATHTGGQVISRARRKPILLCSSLSAAYAPPRRREFYFC 176


>BT021215-1|AAX33363.1|  399|Drosophila melanogaster RH65810p
           protein.
          Length = 399

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -2

Query: 445 RSLCVTXXRXNTCFSCVLVGCSTNSSPPDLQQPVQLSVTFGNRHSGAL 302
           RS+ +       C++ + +      SP ++ +   ++VTFGNR  GAL
Sbjct: 299 RSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGAL 346


>AE014298-2043|AAN09339.1|  541|Drosophila melanogaster CG9413-PB,
           isoform B protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -2

Query: 445 RSLCVTXXRXNTCFSCVLVGCSTNSSPPDLQQPVQLSVTFGNRHSGAL 302
           RS+ +       C++ + +      SP ++ +   ++VTFGNR  GAL
Sbjct: 308 RSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGAL 355


>AE014298-2042|AAF48379.2|  532|Drosophila melanogaster CG9413-PA,
           isoform A protein.
          Length = 532

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = -2

Query: 445 RSLCVTXXRXNTCFSCVLVGCSTNSSPPDLQQPVQLSVTFGNRHSGAL 302
           RS+ +       C++ + +      SP ++ +   ++VTFGNR  GAL
Sbjct: 299 RSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGAL 346


>BT009941-1|AAQ22410.1| 1345|Drosophila melanogaster SD04170p
           protein.
          Length = 1345

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +3

Query: 321 LPNVTDSCTGCCRSGGEEFVLQPTR---TQEKHVLXRXXVTHXERSAEYNLTGDTVI 482
           LPN  + C  CCRS G+ +  +P      Q+   + R  V+H +  AE +  G+T++
Sbjct: 792 LPNSWE-CPSCCRS-GKNYDYKPRHFRARQKSSEVRRVSVSHGQGGAEGHADGNTLL 846


>AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone
           receptor 4 protein.
          Length = 1518

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -2

Query: 178 LRCLGVSSKGCLGGVQAPAPTTARSRDSAAQRQHGMVRASPRAAP--LCGSRCG 23
           LR +GV      G VQ P+P  + S  S+        +  PR  P  + G  CG
Sbjct: 669 LRPVGVGGGNGSGSVQCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG 722


>AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2
           protein.
          Length = 1464

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -2

Query: 178 LRCLGVSSKGCLGGVQAPAPTTARSRDSAAQRQHGMVRASPRAAP--LCGSRCG 23
           LR +GV      G VQ P+P  + S  S+        +  PR  P  + G  CG
Sbjct: 614 LRPVGVGGGNGSGSVQCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG 667


>AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC
           protein.
          Length = 1518

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = -2

Query: 178 LRCLGVSSKGCLGGVQAPAPTTARSRDSAAQRQHGMVRASPRAAP--LCGSRCG 23
           LR +GV      G VQ P+P  + S  S+        +  PR  P  + G  CG
Sbjct: 669 LRPVGVGGGNGSGSVQCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG 722


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,709,828
Number of Sequences: 53049
Number of extensions: 421375
Number of successful extensions: 1559
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1552
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1970722560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)