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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1306
         (610 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)              92   3e-19
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   6e-11
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)              52   3e-07
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)                   45   6e-05
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)             44   1e-04
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)                   41   0.001
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)           40   0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)             39   0.003
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)              39   0.004
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)         37   0.015
SB_16027| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.015
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)             37   0.015
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)                   36   0.019
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)         36   0.026
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)              36   0.034
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)                   35   0.059
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)             35   0.059
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.10 
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)                   33   0.18 
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.32 
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)                   32   0.42 
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.55 
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)           31   0.55 
SB_24472| Best HMM Match : I-set (HMM E-Value=0)                       31   0.73 
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.97 
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)                   30   1.3  
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)               30   1.3  
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)             30   1.7  
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)                    30   1.7  
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.2  
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)                   29   2.9  
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_26302| Best HMM Match : Reg_prop (HMM E-Value=3.1e-06)              29   3.9  
SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)                      29   3.9  
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)                 29   3.9  
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)                 28   5.1  
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)                  28   5.1  
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)             28   5.1  
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)                 28   5.1  
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)                    28   6.8  
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)                 28   6.8  
SB_59774| Best HMM Match : Phage_AlpA (HMM E-Value=6.8)                27   9.0  
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)                    27   9.0  
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)                 27   9.0  
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)                   27   9.0  

>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 304

 Score = 92.3 bits (219), Expect = 3e-19
 Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
 Frame = +1

Query: 256 APIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 432
           APIERVKLL+Q Q  + K    D  YKG++D   R  + +G LSFWRGN AN IRYFPTQ
Sbjct: 28  APIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQ 87

Query: 433 ALNFAFKDKYKQVF 474
           ALNFAFKD+ K +F
Sbjct: 88  ALNFAFKDQVKALF 101



 Score = 36.7 bits (81), Expect = 0.015
 Identities = 16/51 (31%), Positives = 32/51 (62%)
 Frame = +1

Query: 325 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 477
           +YKG +D  ++I K++G +S  +G  AN++R      +   F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297


>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 262

 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 29/71 (40%), Positives = 49/71 (69%)
 Frame = +1

Query: 256 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 435
           +P+ERVK+LLQ+Q        + ++KG++   ++I KE+G+L +++GN  NVIR FP  A
Sbjct: 53  SPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSA 106

Query: 436 LNFAFKDKYKQ 468
           + FA  ++YK+
Sbjct: 107 VQFAAYEEYKK 117


>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 453

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 33/80 (41%), Positives = 45/80 (56%)
 Frame = +1

Query: 256 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 435
           AP++R+K+LLQVQ      A+     GIV  F  + +E G+ S WRGN ANVI+  P   
Sbjct: 155 APLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPESG 208

Query: 436 LNFAFKDKYKQVFLGGVDKK 495
           + F   +K K+  L G D K
Sbjct: 209 IKFFAYEKAKK--LVGSDTK 226



 Score = 33.5 bits (73), Expect = 0.14
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +1

Query: 283 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 462
           L+V      I    +Y+G++ A   I +++G+ SF+RG F +++   P   ++ A  +  
Sbjct: 251 LEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETL 310

Query: 463 KQVFL 477
           K  +L
Sbjct: 311 KNFYL 315


>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 375

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 18/55 (32%), Positives = 31/55 (56%)
 Frame = +1

Query: 283 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 447
           L+V  V  Q+   +   G++  F  + K +G+ +FW+GN  + IR FP  A+ +A
Sbjct: 79  LEVVKVLAQVGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133



 Score = 37.9 bits (84), Expect = 0.006
 Identities = 21/56 (37%), Positives = 32/56 (57%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 426
           P E +K  L VQHV+K  A    YKG+  A   I +E+G+L+ ++G   + +  FP
Sbjct: 172 PCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLGLFP 224


>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
          Length = 76

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +1

Query: 256 APIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 393
           APIERVKLL+Q Q  + K       YKG+VD  +R  + +G+ SFWR
Sbjct: 29  APIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75


>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 274

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 21/63 (33%), Positives = 37/63 (58%)
 Frame = +1

Query: 256 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 435
           AP++ VK+ LQ+Q  +K+ +    Y+G VD  V++ + +GL   ++GN    +R  P  A
Sbjct: 52  APVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGFA 110

Query: 436 LNF 444
           + F
Sbjct: 111 VYF 113



 Score = 33.1 bits (72), Expect = 0.18
 Identities = 16/40 (40%), Positives = 26/40 (65%)
 Frame = +1

Query: 325 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 444
           RYKG++D  ++  KE+G++ F RG +  ++R F  Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208


>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
          Length = 773

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 14/48 (29%), Positives = 30/48 (62%)
 Frame = +1

Query: 325 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 468
           +Y G+     +I +++GL  +++GN  N++R  P  A+ FA  +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637


>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
          Length = 95

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 16/55 (29%), Positives = 32/55 (58%)
 Frame = +1

Query: 310 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 474
           I   ++Y G+++AF RI +++G+ +F+RG    +I   P   ++F   +  K+ F
Sbjct: 19  ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73


>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 266

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 340 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 507
           +DA ++IP+ +GL S WRG    ++   P   + F   D+ K +  G  + +T  W
Sbjct: 64  IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK-ISYGFKNNETNLW 118


>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
          Length = 192

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +1

Query: 328 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 477
           Y  + +A  R+ KE+G+L+ WRG     +R     A   A   + KQ+ L
Sbjct: 35  YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84



 Score = 35.9 bits (79), Expect = 0.026
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 438
           P++  K  +Q   +   I     YKG +D   RI + +G+ + W+G      R  P   L
Sbjct: 113 PVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVL 169

Query: 439 NFAFKDKYKQV---FLGG 483
            F F ++  +    F GG
Sbjct: 170 TFIFLEQLNRAANYFYGG 187


>SB_16027| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 130

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = -2

Query: 609 TSAARRVRAKSRGTRSTERWLRRHHRRPDYQRSKPE 502
           +S +RR RA++RG R T+RW R HH +  ++R + E
Sbjct: 59  SSYSRRARAETRGDRETKRW-RIHHTQEGHERKQEE 93


>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
          Length = 1026

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 18/72 (25%), Positives = 36/72 (50%)
 Frame = +1

Query: 259  PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 438
            PI+ VK  +Q Q     + A++ YK  +D F ++ + +G +  +RG    ++   P +A+
Sbjct: 933  PIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEKAI 990

Query: 439  NFAFKDKYKQVF 474
                 D  + +F
Sbjct: 991  KLTTNDFVRGIF 1002


>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 264

 Score = 36.3 bits (80), Expect = 0.019
 Identities = 16/45 (35%), Positives = 29/45 (64%)
 Frame = +1

Query: 337 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 471
           ++ AF  I + +GLL++++GN A ++R FP  A+ F   + Y +V
Sbjct: 13  VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57


>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
          Length = 247

 Score = 35.9 bits (79), Expect = 0.026
 Identities = 19/47 (40%), Positives = 28/47 (59%)
 Frame = +1

Query: 256 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 396
           AP ERVK LLQVQ   K+     RY+G+ D  +++ +  GL   ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222


>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
          Length = 577

 Score = 35.5 bits (78), Expect = 0.034
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 396
           P E +K  L VQHV+K  A    YKG+  A   I +E+G+L+ ++G
Sbjct: 441 PCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483


>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 203

 Score = 34.7 bits (76), Expect = 0.059
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = +1

Query: 328 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGGVDKKT 498
           Y+G++     + KE+G+ +F+R     +    P Q L+F   +  ++    LGG D KT
Sbjct: 32  YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKT 90


>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
          Length = 868

 Score = 34.7 bits (76), Expect = 0.059
 Identities = 19/71 (26%), Positives = 33/71 (46%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 438
           PI+  K  +QVQ +  Q  A  +Y+ +  A   I +  G+   ++G  A ++R  P    
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280

Query: 439 NFAFKDKYKQV 471
            F F +  K +
Sbjct: 281 FFGFYEFTKNL 291


>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 796

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 358 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 471
           +P+E  L   W G F++VI  F   A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309


>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 611

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 435
           P++ VK   Q    +       +Y G  D   +I    G+ +F +G  A ++R FPT A
Sbjct: 377 PVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435


>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 213

 Score = 32.3 bits (70), Expect = 0.32
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +1

Query: 358 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 471
           +P+E  +L  W G  ++VI  F   A+N  F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176


>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 309

 Score = 31.9 bits (69), Expect = 0.42
 Identities = 16/62 (25%), Positives = 33/62 (53%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 438
           P++ +K+ LQ  +  K       +KG +D F++  + +GL   ++G  + ++   P+ AL
Sbjct: 40  PLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTAL 98

Query: 439 NF 444
            F
Sbjct: 99  TF 100


>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 300

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 24/82 (29%), Positives = 36/82 (43%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 438
           P E VK  LQ+     + AA   Y+G +D   +  K  G+L  +RG  + +    P  ++
Sbjct: 60  PTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASV 115

Query: 439 NFAFKDKYKQVFLGGVDKKTQF 504
            FA  +  K        K TQF
Sbjct: 116 RFAVFEYLKNKMADENGKLTQF 137


>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
          Length = 965

 Score = 31.5 bits (68), Expect = 0.55
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -2

Query: 234 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 100
           A++PP R  +A +  +  FD+   + I TR   RGG   ++ WG+
Sbjct: 538 ADLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581


>SB_24472| Best HMM Match : I-set (HMM E-Value=0)
          Length = 473

 Score = 31.1 bits (67), Expect = 0.73
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = -2

Query: 378 ETLLLGDADEGVDDTLVTLVGGDLLADVL-YLEQQLDTLDGCSAVLETAAEIPPARKSLA 202
           E L   DA E V +  +   G D +  +  Y   Q+DTL+G S  L+  A+  P   ++A
Sbjct: 169 ECLARNDAGEQVTEASLRYYGRDAVPQLTRYPRAQVDTLEGNSVTLQCRAQGRP-NPTIA 227

Query: 201 NATGSARFDI 172
            A G    D+
Sbjct: 228 WAKGGTPLDV 237


>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1616

 Score = 30.7 bits (66), Expect = 0.97
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -2

Query: 234  AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 100
            A++PP R  +A    +  FD+   + I TR   RGG   ++ WG+
Sbjct: 1265 ADLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308


>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 306

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 396
           P + VK+  Q   + + I     YK +  AF +I K++G L  W G
Sbjct: 134 PTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175


>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 214

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 426
           P E +K  LQ QH +  I+     K G++D  ++I +  G    +RG  A   R  P
Sbjct: 126 PAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182


>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
          Length = 54

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +1

Query: 334 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 471
           G+V    +     G    +RGN A ++R  P  ++ F   ++YK++
Sbjct: 1   GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46


>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 434

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 17/56 (30%), Positives = 31/56 (55%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 426
           P++ V+  L VQ +S +  ++  Y GIV A  RI  E+G+   ++G   +++   P
Sbjct: 48  PLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLYKGLVPSLVSIAP 101


>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 179

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
 Frame = +1

Query: 259 PIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 396
           P + +K  +QVQ      +     Q+Y G+ D F  I KE+G +  ++G
Sbjct: 49  PFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97


>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
          Length = 328

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/63 (23%), Positives = 29/63 (46%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 438
           P++ +K+ LQ   + K       YK   D F +I + +G+   +RG    ++   P   +
Sbjct: 58  PLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTV 116

Query: 439 NFA 447
            F+
Sbjct: 117 LFS 119


>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 226

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 279 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 380
           A+ S  RQQ  R RP  +GY +R  R +P+   SP
Sbjct: 83  ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117


>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 706

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 279 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 380
           A+ S  RQQ  R RP  +GY +R  R +P+   SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217


>SB_26302| Best HMM Match : Reg_prop (HMM E-Value=3.1e-06)
          Length = 117

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +1

Query: 334 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY--KQVFLGGVDKKTQFW 507
           G++ + V   ++  +   W G    + +Y      N+  +D      V   G+DKK Q W
Sbjct: 17  GLIQSQVTAIEQDKMGHLWMGTIGGLAKYDGHTFTNYTIRDGLLNNSVTALGIDKKNQIW 76

Query: 508 L 510
           +
Sbjct: 77  I 77


>SB_6686| Best HMM Match : Kazal_1 (HMM E-Value=0)
          Length = 2411

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 11/18 (61%), Positives = 11/18 (61%)
 Frame = -1

Query: 505 RTASSCQRRRGTPACTCP 452
           R  S CQRRRG   C CP
Sbjct: 939 RFYSKCQRRRGGAQCVCP 956


>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
          Length = 404

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 279 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 380
           A+ S  RQQ  R RP  +GY +R  R +P+   SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295


>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 866

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +1

Query: 361 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 477
           P+E  L   W G  ++VI  F    +N  F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853


>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
          Length = 550

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +3

Query: 279 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 380
           A+ S  RQQ  R RP   GY +R  R +P+   SP
Sbjct: 84  ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118


>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
          Length = 343

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +1

Query: 358 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 474
           +P+E   L  + G  ++VI  F   A+N  F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301


>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
          Length = 302

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 15/56 (26%), Positives = 29/56 (51%)
 Frame = +1

Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 426
           P++ +K  LQ+ +  +    +  Y GI+D   +I   +GL +F++G    +I   P
Sbjct: 225 PLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVIAP 277


>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
          Length = 368

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +1

Query: 358 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 471
           +P+E  +L  + G  ++VI  F   A+N  FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304


>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
          Length = 553

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 265 ERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 399
           ER  +L+  Q    Q  +D RY+G +D+F    + +G L  +RG+
Sbjct: 286 ERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330


>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
          Length = 792

 Score = 27.9 bits (59), Expect = 6.8
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
 Frame = +1

Query: 7   ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 150
           ++ ++  Y  C  + E +P +       +    ++D  SAC A P  TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157


>SB_59774| Best HMM Match : Phage_AlpA (HMM E-Value=6.8)
          Length = 149

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = -2

Query: 597 RRVRAKSRGTRSTERWLRRHHRRPDYQRSKPELR 496
           R VRAK  G      WLR    +P Y R KP +R
Sbjct: 79  RAVRAKGVGRERVAAWLR---GQPSYTRHKPYVR 109


>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
          Length = 2418

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +1

Query: 55   ITPN----LLFKNQELVFRDPPSACAATPTSTYSPSEDHII 165
            +TPN    LL +  +   R+P SA      S YSPSE  I+
Sbjct: 963  LTPNVRYQLLIRASDSATRNPSSAQVPVYVSVYSPSESPIV 1003


>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
          Length = 406

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 279 AAPSTARQQADRRRPALQGYRRR-LRPHPQGAGSP 380
           A+ S  RQQ  R RP  +GY +R  R +P+   +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217


>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
          Length = 1170

 Score = 27.5 bits (58), Expect = 9.0
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = +1

Query: 34  LCSRDYEITPNLLFKN---QELVFRDPPSACAATPTSTYSPSED 156
           LC +D E++P LLF N   +++  R  P    A P++  S  ED
Sbjct: 54  LCGKDQEVSPKLLFGNDLAKQVRDRKKPPVW-ANPSAPQSAKED 96


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,397,359
Number of Sequences: 59808
Number of extensions: 373308
Number of successful extensions: 1255
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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