BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1306 (610 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 160 1e-41 AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 160 1e-41 AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 9.4 >AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 160 bits (388), Expect = 1e-41 Identities = 72/83 (86%), Positives = 78/83 (93%) Frame = +1 Query: 256 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 435 APIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQA Sbjct: 29 APIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQA 88 Query: 436 LNFAFKDKYKQVFLGGVDKKTQF 504 LNFAFKDKYKQVFLGGVDK TQF Sbjct: 89 LNFAFKDKYKQVFLGGVDKNTQF 111 Score = 51.2 bits (117), Expect = 8e-09 Identities = 23/30 (76%), Positives = 26/30 (86%) Frame = +2 Query: 173 MSNLADPVAFAKDFLAGGISAAVSKTAEHP 262 MS LADPVAFAKDFLAGG++AA+SKT P Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAP 30 Score = 29.9 bits (64), Expect = 0.020 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +2 Query: 572 PLDFARTRLAADV 610 PLDFARTRLAADV Sbjct: 135 PLDFARTRLAADV 147 Score = 27.5 bits (58), Expect = 0.11 Identities = 14/53 (26%), Positives = 30/53 (56%) Frame = +1 Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 417 P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282 Score = 22.2 bits (45), Expect = 4.1 Identities = 11/25 (44%), Positives = 11/25 (44%) Frame = +3 Query: 504 LAYFXXXXXXXXXXXXTSLCFVSPL 578 L YF TSLCFV PL Sbjct: 112 LRYFVGNLASGGAAGATSLCFVYPL 136 Score = 21.8 bits (44), Expect = 5.4 Identities = 15/65 (23%), Positives = 29/65 (44%) Frame = +1 Query: 319 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKT 498 ++ + G+ + +I K G+ +RG +V +A F F D + + KKT Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD--PKKT 210 Query: 499 QFWLT 513 F ++ Sbjct: 211 PFLIS 215 >AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase protein. Length = 300 Score = 160 bits (388), Expect = 1e-41 Identities = 72/83 (86%), Positives = 78/83 (93%) Frame = +1 Query: 256 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 435 APIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQA Sbjct: 29 APIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQA 88 Query: 436 LNFAFKDKYKQVFLGGVDKKTQF 504 LNFAFKDKYKQVFLGGVDK TQF Sbjct: 89 LNFAFKDKYKQVFLGGVDKNTQF 111 Score = 51.2 bits (117), Expect = 8e-09 Identities = 23/30 (76%), Positives = 26/30 (86%) Frame = +2 Query: 173 MSNLADPVAFAKDFLAGGISAAVSKTAEHP 262 MS LADPVAFAKDFLAGG++AA+SKT P Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAP 30 Score = 29.9 bits (64), Expect = 0.020 Identities = 13/13 (100%), Positives = 13/13 (100%) Frame = +2 Query: 572 PLDFARTRLAADV 610 PLDFARTRLAADV Sbjct: 135 PLDFARTRLAADV 147 Score = 27.5 bits (58), Expect = 0.11 Identities = 14/53 (26%), Positives = 30/53 (56%) Frame = +1 Query: 259 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 417 P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282 Score = 22.2 bits (45), Expect = 4.1 Identities = 11/25 (44%), Positives = 11/25 (44%) Frame = +3 Query: 504 LAYFXXXXXXXXXXXXTSLCFVSPL 578 L YF TSLCFV PL Sbjct: 112 LRYFVGNLASGGAAGATSLCFVYPL 136 Score = 21.8 bits (44), Expect = 5.4 Identities = 15/65 (23%), Positives = 29/65 (44%) Frame = +1 Query: 319 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKT 498 ++ + G+ + +I K G+ +RG +V +A F F D + + KKT Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPD--PKKT 210 Query: 499 QFWLT 513 F ++ Sbjct: 211 PFLIS 215 >AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. Length = 147 Score = 21.0 bits (42), Expect = 9.4 Identities = 8/21 (38%), Positives = 11/21 (52%) Frame = +2 Query: 98 VIPHPRVPQLPPRHIHLVKIT 160 +I P +LPP H H +T Sbjct: 92 IITIPPTRKLPPLHPHTAMVT 112 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 159,721 Number of Sequences: 438 Number of extensions: 3075 Number of successful extensions: 15 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 15 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17971191 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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