Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1304
         (536 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.      25   0.56 
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   1.3  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   1.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.3  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   5.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   5.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   9.1  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.1  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.1  

>Z69742-1|CAA93624.1|   72|Tribolium castaneum arylphorin protein.
          Length = 72

 Score = 24.6 bits (51), Expect = 0.56
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 204 RCRGGSSTWRSEHV 245
           RC G  S WR EH+
Sbjct: 10  RCEGKDSKWRGEHM 23


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +1

Query: 355 VEDMISLGDLHEAGILRNLLIRYN*KSYLYI 447
           +++++   D HE  +LRN+ +++     LYI
Sbjct: 117 IDEVLKNRDSHETNLLRNVSVQFFVYVILYI 147


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +1

Query: 355 VEDMISLGDLHEAGILRNLLIRYN*KSYLYI 447
           +++++   D HE  +LRN+ +++     LYI
Sbjct: 117 IDEVLKNRDSHETNLLRNVSVQFFVYVILYI 147


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -2

Query: 286 RRPGPGSDVPRRENTCSDRHVELPPRHRLDP 194
           RR   GS+       CS R   L P  +++P
Sbjct: 802 RRERSGSESSSISERCSSRVESLTPERKMEP 832


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 528 LLEQFDLSAV*IGSX*YGFTATNIDPVYV 442
           LL  FD S + +    +   A N+DP+Y+
Sbjct: 305 LLVNFDCSTMWLKDPSWLVNAFNVDPLYL 333


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 271 GSDVPRRENTCSDRHVELPP 212
           G D P R N C ++    PP
Sbjct: 74  GCDYPWRSNYCDNKQQANPP 93


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 46  VCYLLLFSACVCVMKRS 96
           VC L L   C CV+K +
Sbjct: 265 VCLLSLIILCDCVVKEA 281


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/31 (22%), Positives = 14/31 (45%)
 Frame = -3

Query: 102 GSAPLHDTDTGTEQKQITNYHWLGITSHGHR 10
           GS+P H + + +       Y ++    H H+
Sbjct: 42  GSSPQHSSSSASTSPAARMYPYVSAAHHHHQ 72


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 7/31 (22%), Positives = 14/31 (45%)
 Frame = -3

Query: 102 GSAPLHDTDTGTEQKQITNYHWLGITSHGHR 10
           GS+P H + + +       Y ++    H H+
Sbjct: 42  GSSPQHSSSSASTSPAARMYPYVSAAHHHHQ 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,869
Number of Sequences: 336
Number of extensions: 2597
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)