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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1304
         (536 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17)           61   6e-10
SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)              42   2e-04
SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.001
SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17)           40   0.001
SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.002
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)                 38   0.004
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.009
SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)                     36   0.021
SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)        36   0.021
SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0)                 35   0.048
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.11 
SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0)                      33   0.20 
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.45 
SB_5693| Best HMM Match : No HMM Matches (HMM E-Value=.)               31   0.45 
SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0)                 30   1.0  
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.0  
SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06)              30   1.4  
SB_33597| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.2  
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)             28   5.6  
SB_21540| Best HMM Match : fn3 (HMM E-Value=4.3e-30)                   27   7.3  
SB_12952| Best HMM Match : Peptidase_M50 (HMM E-Value=8.9e-07)         27   7.3  
SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.7  

>SB_25986| Best HMM Match : Myosin_head (HMM E-Value=1.4e-17)
          Length = 1189

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
 Frame = +1

Query: 256 EGRRIRVRDDDGNEQWLPPE--RRIKAMHATSVHGVEDMISLGDLHEAGILRNLLIRYN- 426
           +G  + + DD+G E  +       +K MH +SV GVE+MI LGDL EAGILRNLLIRY  
Sbjct: 798 QGASVILVDDEGKEVVIDRSVAESLKHMHPSSVEGVENMIELGDLDEAGILRNLLIRYRA 857

Query: 427 *KSYLYI 447
            K Y Y+
Sbjct: 858 NKIYTYV 864



 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 3/116 (2%)
 Frame = +2

Query: 161  IMVIVTRGDYIWIEPVSGREFDVAIGARVLAARDVXXXXXXXXXXXXXFHRSAXSRRCTR 340
            +M    +GD++W+E   G E DVAIGA V   +                 RS        
Sbjct: 767  LMAFKAQGDHVWLEAGDG-ENDVAIGACVKEVQGASVILVDDEGKEVVIDRSVAESLKHM 825

Query: 341  PPCTESRI*SHSAICTRPVY*GISSSGTIE---NLIYTYTGSILVAVNPYXILPIY 499
             P +   + +   +       GI  +  I    N IYTY GS+LVAVNPY   PIY
Sbjct: 826  HPSSVEGVENMIELGDLDEA-GILRNLLIRYRANKIYTYVGSVLVAVNPYCSFPIY 880


>SB_29364| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 884

 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +2

Query: 410 SSSGTIENLIYTYTGSILVAVNPYXILPIYTAD 508
           +S G +E++  TYTGSILVAVNPY + PIY A+
Sbjct: 33  TSIGGVEDM--TYTGSILVAVNPYQLYPIYDAE 63



 Score = 39.9 bits (89), Expect = 0.001
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
 Frame = +1

Query: 265 RIRVRDDDGNEQWLPPER--RIKAMHATSVHGVEDMISLGDL 384
           ++++ DD+G E W+      +++AMH TS+ GVEDM   G +
Sbjct: 6   QVQIIDDEGKEHWIKTTNATKLRAMHPTSIGGVEDMTYTGSI 47


>SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2033

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 15/25 (60%), Positives = 21/25 (84%)
 Frame = +2

Query: 428 ENLIYTYTGSILVAVNPYXILPIYT 502
           +++IYTY G IL+AVNP+  LPIY+
Sbjct: 32  QDIIYTYVGDILIAVNPFKTLPIYS 56


>SB_32548| Best HMM Match : Myosin_head (HMM E-Value=2.9e-17)
          Length = 546

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 15/24 (62%), Positives = 21/24 (87%)
 Frame = +2

Query: 431 NLIYTYTGSILVAVNPYXILPIYT 502
           NLIYTY G+++V++NPY  LPIY+
Sbjct: 50  NLIYTYIGTVVVSINPYKNLPIYS 73


>SB_45041| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1278

 Score = 39.5 bits (88), Expect = 0.002
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +2

Query: 431 NLIYTYTGSILVAVNPYXILPIYTAD 508
           N IYTY G +LVA+NPY  LP+Y  D
Sbjct: 433 NAIYTYCGIVLVAINPYEELPLYGPD 458


>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
          Length = 1997

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = +2

Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
           LIYTY+G   VA+NPY  LPIYT
Sbjct: 108 LIYTYSGLFCVAINPYRRLPIYT 130


>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1805

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 16/23 (69%), Positives = 17/23 (73%)
 Frame = +2

Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
           LIYTY+G   V VNPY  LPIYT
Sbjct: 106 LIYTYSGLFCVVVNPYKRLPIYT 128


>SB_5844| Best HMM Match : RA (HMM E-Value=2.1e-10)
          Length = 280

 Score = 35.9 bits (79), Expect = 0.021
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = +2

Query: 437 IYTYTGSILVAVNPYXILPIY 499
           IYTY G IL+AVNP+   PIY
Sbjct: 175 IYTYVGEILLAVNPFRFFPIY 195


>SB_4921| Best HMM Match : Myosin_head (HMM E-Value=7.39998e-41)
          Length = 1017

 Score = 35.9 bits (79), Expect = 0.021
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = +2

Query: 437 IYTYTGSILVAVNPYXILPIYTAD 508
           IYTY G+++V++NPY   P+YT +
Sbjct: 50  IYTYIGNVVVSINPYRKFPLYTRE 73



 Score = 32.3 bits (70), Expect = 0.26
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 352 GVEDMISLGDLHEAGILRNLLIRYN*KS-YLYIHRIDIS 465
           GV DM+ L  L E  I+ NL  RYN K+ Y YI  + +S
Sbjct: 22  GVSDMVLLEPLTEDAIMENLWDRYNAKAIYTYIGNVVVS 60


>SB_34413| Best HMM Match : Myosin_head (HMM E-Value=0)
          Length = 650

 Score = 34.7 bits (76), Expect = 0.048
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +2

Query: 437 IYTYTGSILVAVNPYXILPIYTADR 511
           IYTY G ++V+VNPY  L IY  D+
Sbjct: 38  IYTYIGEVVVSVNPYKTLNIYGDDK 62


>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1926

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 23/72 (31%), Positives = 32/72 (44%)
 Frame = +3

Query: 180 GAITYGSSRCRGGSSTWRSEHVFSRRGTSDPGPGRRRQRAMASTGAPXQGDARDLRARSR 359
           G    G  R R  SS++ S    SR  + D G GR+R R  + + +         R+RSR
Sbjct: 654 GGSRRGKRRSRSRSSSYSSRSR-SRSRSRDRGRGRKRSRRRSRSSSHSSSSLSRSRSRSR 712

Query: 360 GYDLTRRSARGR 395
                RR +R R
Sbjct: 713 SRGRGRRRSRSR 724


>SB_1181| Best HMM Match : DUF1604 (HMM E-Value=0)
          Length = 1035

 Score = 32.7 bits (71), Expect = 0.20
 Identities = 13/48 (27%), Positives = 30/48 (62%)
 Frame = +3

Query: 285  RRQRAMASTGAPXQGDARDLRARSRGYDLTRRSARGRYTKESPHPVQL 428
            +R+ +  S+G+  + D+RD RA+ R  + ++ S + R ++ +P P ++
Sbjct: 966  QREYSDTSSGSEGESDSRDNRAKERASEKSKLSDKSRTSENTPDPKEI 1013


>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 548

 Score = 31.5 bits (68), Expect = 0.45
 Identities = 26/79 (32%), Positives = 35/79 (44%)
 Frame = +3

Query: 177 PGAITYGSSRCRGGSSTWRSEHVFSRRGTSDPGPGRRRQRAMASTGAPXQGDARDLRARS 356
           P    Y S R R  +   RS    SR  + D  P RRR R    +       +RD ++RS
Sbjct: 200 PSPSPYRSRRSRSRTRRSRSRSRRSRSRSRDRRP-RRRSRDRERSRERRSRRSRD-KSRS 257

Query: 357 RGYDLTRRSARGRYTKESP 413
           R     R  +RGR  ++SP
Sbjct: 258 REKSRERGGSRGRSAEKSP 276



 Score = 31.1 bits (67), Expect = 0.60
 Identities = 17/55 (30%), Positives = 25/55 (45%)
 Frame = +3

Query: 255 RGTSDPGPGRRRQRAMASTGAPXQGDARDLRARSRGYDLTRRSARGRYTKESPHP 419
           R  SD  P  R +    S       + R  ++RS+  D +RRS    Y++ SP P
Sbjct: 150 RSRSDSRPRSRYRGRSRSRSRDRYRERRPRKSRSKSLDRSRRSRSRSYSRPSPSP 204


>SB_5693| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1429

 Score = 31.5 bits (68), Expect = 0.45
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 431 NLIYTYTGSILVAVNPYXILPIYTAD 508
           N + TY G IL++VNPY  L  YT +
Sbjct: 4   NFLQTYIGKILLSVNPYKQLDSYTPE 29


>SB_42005| Best HMM Match : Myosin_head (HMM E-Value=0)
          Length = 621

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 437 IYTYTGSILVAVNPYXIL 490
           IYTY G+IL AVNPY  +
Sbjct: 25  IYTYIGTILCAVNPYSFI 42


>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2463

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 431 NLIYTYTGSILVAVNPYXILPIYT 502
           NLI+TY G  ++ +NP   L IYT
Sbjct: 402 NLIHTYAGPNMIVINPQQQLAIYT 425


>SB_10638| Best HMM Match : Myosin_N (HMM E-Value=1.5e-06)
          Length = 1977

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +2

Query: 437  IYTYTGSILVAVNPY-XILPIYTAD 508
            IYTY  +IL+AVNPY  +  +YT +
Sbjct: 1854 IYTYVANILLAVNPYHEVKELYTKE 1878


>SB_33597| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 609

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
 Frame = +3

Query: 195 GSSRCRG-GSSTWRSEHVFSRRGTSDPGPGRRRQRAMASTGAPXQGDARDLRARSRGYDL 371
           G+SR  G G++   + H+     +  P  G   + A   +G P  GD ++    S G  +
Sbjct: 465 GASRDEGRGNNLVSAGHMSPHSRSPRPPSGPLSKSAETQSGLPNDGDGKEKEKGSSGQSI 524

Query: 372 TRRSARGRYTKESPHPVQLKILFIH 446
            R S   R   E  H VQ   +  H
Sbjct: 525 LRCSL-CRDKLEDTHFVQCPSIMHH 548


>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
          Length = 3810

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = +3

Query: 54   FASVQCLCLCHEEELNRACDSRQRINDQ 137
            F   Q LCLC  E L   CD R  I DQ
Sbjct: 3720 FDKEQGLCLCKRESLQNVCD-RDCIQDQ 3746


>SB_21540| Best HMM Match : fn3 (HMM E-Value=4.3e-30)
          Length = 634

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 407 ISSSGTIENLIYTYTGSILVAVNPYXI 487
           +   GTI N++  YTG ++  V PY +
Sbjct: 486 VRGHGTISNMLSGYTGELVPVVAPYGL 512


>SB_12952| Best HMM Match : Peptidase_M50 (HMM E-Value=8.9e-07)
          Length = 413

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 407 ISSSGTIENLIYTYTGSILVAVNPYXILPIYTADR 511
           I  +G   N+I    G +L+   PY ++P+Y AD+
Sbjct: 188 IYCAGVWHNVILVLLGLLLLWSLPYLLVPLYMADQ 222


>SB_50216| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3293

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +3

Query: 219 SSTWRSEHVFSRRGTSDPGPGRRRQRAMASTGAPXQGDARDLRARSRG 362
           S +W S+H+     TS     R+   A  S G   +    +LR R RG
Sbjct: 467 SKSWPSDHLGDNSRTSGTNSDRQSWPAQHSPGHDPRSHDDELRERPRG 514


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,452,616
Number of Sequences: 59808
Number of extensions: 345354
Number of successful extensions: 944
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 942
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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