Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1304
         (536 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    24   3.7  
AY333996-1|AAR01121.1|  245|Anopheles gambiae arrestin protein.        23   4.9  
AY333995-1|AAR01120.1|  245|Anopheles gambiae arrestin protein.        23   4.9  
AY333994-1|AAR01119.1|  245|Anopheles gambiae arrestin protein.        23   4.9  
AY333993-1|AAR01118.1|  245|Anopheles gambiae arrestin protein.        23   4.9  
AY333992-1|AAR01117.1|  245|Anopheles gambiae arrestin protein.        23   4.9  
AY333991-1|AAR01116.1|  245|Anopheles gambiae arrestin protein.        23   4.9  
AY333990-1|AAR01115.1|  245|Anopheles gambiae arrestin protein.        23   4.9  
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        23   4.9  
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        23   4.9  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 270 PGPGRRRQRAMASTGAPXQG 329
           PGPG + +R+  + G P  G
Sbjct: 230 PGPGEKARRSDPAAGCPRSG 249


>AY333996-1|AAR01121.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 252 RRGTSDPGPGRRRQRAMASTGAPXQGDARD 341
           RRG +  G  +R+ + +AST    Q D RD
Sbjct: 158 RRGIALDGQIKRQDQCLASTTLLAQPDQRD 187


>AY333995-1|AAR01120.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 252 RRGTSDPGPGRRRQRAMASTGAPXQGDARD 341
           RRG +  G  +R+ + +AST    Q D RD
Sbjct: 158 RRGIALDGQIKRQDQCLASTTLLAQPDQRD 187


>AY333994-1|AAR01119.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 252 RRGTSDPGPGRRRQRAMASTGAPXQGDARD 341
           RRG +  G  +R+ + +AST    Q D RD
Sbjct: 158 RRGIALDGQIKRQDQCLASTTLLAQPDQRD 187


>AY333993-1|AAR01118.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 252 RRGTSDPGPGRRRQRAMASTGAPXQGDARD 341
           RRG +  G  +R+ + +AST    Q D RD
Sbjct: 158 RRGIALDGQIKRQDQCLASTTLLAQPDQRD 187


>AY333992-1|AAR01117.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 252 RRGTSDPGPGRRRQRAMASTGAPXQGDARD 341
           RRG +  G  +R+ + +AST    Q D RD
Sbjct: 158 RRGIALDGQIKRQDQCLASTTLLAQPDQRD 187


>AY333991-1|AAR01116.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 252 RRGTSDPGPGRRRQRAMASTGAPXQGDARD 341
           RRG +  G  +R+ + +AST    Q D RD
Sbjct: 158 RRGIALDGQIKRQDQCLASTTLLAQPDQRD 187


>AY333990-1|AAR01115.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 252 RRGTSDPGPGRRRQRAMASTGAPXQGDARD 341
           RRG +  G  +R+ + +AST    Q D RD
Sbjct: 158 RRGIALDGQIKRQDQCLASTTLLAQPDQRD 187


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 252 RRGTSDPGPGRRRQRAMASTGAPXQGDARD 341
           RRG +  G  +R+ + +AST    Q D RD
Sbjct: 286 RRGIALDGQIKRQDQCLASTTLLAQPDQRD 315


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 23.4 bits (48), Expect = 4.9
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 252 RRGTSDPGPGRRRQRAMASTGAPXQGDARD 341
           RRG +  G  +R+ + +AST    Q D RD
Sbjct: 286 RRGIALDGQIKRQDQCLASTTLLAQPDQRD 315


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,060
Number of Sequences: 2352
Number of extensions: 11154
Number of successful extensions: 35
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)