BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1304 (536 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 81 4e-16 Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 40 0.001 Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 40 0.001 U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 40 0.001 U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 38 0.006 Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 37 0.008 Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 37 0.008 J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 37 0.008 Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 37 0.011 Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 37 0.011 Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 37 0.011 Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 37 0.011 Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 37 0.011 X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 37 0.011 X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 37 0.011 AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 36 0.014 Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 35 0.043 X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 35 0.043 Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 34 0.056 X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 34 0.056 U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 34 0.056 Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 32 0.23 M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein. 31 0.69 M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein. 31 0.69 AL132952-14|CAB63386.1| 257|Caenorhabditis elegans Hypothetical... 30 0.92 AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 30 0.92 AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 30 0.92 Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 30 1.2 U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 30 1.2 U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 30 1.2 U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 30 1.2 AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 30 1.2 AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 29 2.1 AC027664-1|AAK18923.1| 326|Caenorhabditis elegans Hypothetical ... 29 2.1 Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical pr... 28 3.7 Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical pr... 28 3.7 AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical ... 28 3.7 AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 28 3.7 Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical pr... 27 6.5 AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 27 8.6 >U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, unconventional myosinprotein 6 protein. Length = 2098 Score = 81.4 bits (192), Expect = 4e-16 Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%) Frame = +1 Query: 265 RIRVRDDDGNEQWLPPERRIKAMHATSVHGVEDMISLGDLHEAGILRNLLIRYN*K-SYL 441 R++V DD GNEQWL +RR++ MH TSV GVEDM LGD HE+ ILRNL IRY K Y Sbjct: 34 RLKVIDDLGNEQWLSADRRVRLMHPTSVQGVEDMCQLGDFHESAILRNLFIRYREKLIYA 93 Query: 442 YIHRIDISCGESVSXTTDLHGGQIKLFKERK 534 Y I I+ + +I+++K ++ Sbjct: 94 YTGSILIAVNPYMDIAI-YTADEIRMYKRKR 123 Score = 45.2 bits (102), Expect = 3e-05 Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 8/132 (6%) Frame = +2 Query: 164 MVIVTRGDYIWIEPVSGREFDVAIGARVLAARDVXXXXXXXXXXXXXFHRSAXSRRCTRP 343 MV+V++GD+IWIEP E + IGARV+ +D + + R P Sbjct: 1 MVLVSKGDFIWIEP-GKTEGSIPIGARVI-DQDHGRLKVIDDLGNEQWLSADRRVRLMHP 58 Query: 344 PCTESRI*SHSAICTRPVY*GISSSGTIENLIYTY--------TGSILVAVNPYXILPIY 499 + +C + S + NL Y TGSIL+AVNPY + IY Sbjct: 59 TSVQ----GVEDMCQLGDF---HESAILRNLFIRYREKLIYAYTGSILIAVNPYMDIAIY 111 Query: 500 TADRSNCSRREK 535 TAD +R++ Sbjct: 112 TADEIRMYKRKR 123 >Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical protein F20G4.3 protein. Length = 2003 Score = 39.5 bits (88), Expect = 0.001 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%) Frame = +2 Query: 431 NLIYTYTGSILVAVNPYXILPIYT---ADRSNCSRREK 535 NL YTY+G V +NPY +PIYT A++ C +R++ Sbjct: 113 NLYYTYSGLFCVVINPYKRIPIYTDTIAEQFKCKKRKE 150 >Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein F20G4.3 protein. Length = 2003 Score = 39.5 bits (88), Expect = 0.001 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%) Frame = +2 Query: 431 NLIYTYTGSILVAVNPYXILPIYT---ADRSNCSRREK 535 NL YTY+G V +NPY +PIYT A++ C +R++ Sbjct: 113 NLYYTYSGLFCVVINPYKRIPIYTDTIAEQFKCKKRKE 150 >U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin heavy chain II protein. Length = 2003 Score = 39.5 bits (88), Expect = 0.001 Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%) Frame = +2 Query: 431 NLIYTYTGSILVAVNPYXILPIYT---ADRSNCSRREK 535 NL YTY+G V +NPY +PIYT A++ C +R++ Sbjct: 113 NLYYTYSGLFCVVINPYKRIPIYTDTIAEQFKCKKRKE 150 >U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin protein 1 protein. Length = 1963 Score = 37.5 bits (83), Expect = 0.006 Identities = 15/26 (57%), Positives = 19/26 (73%) Frame = +2 Query: 431 NLIYTYTGSILVAVNPYXILPIYTAD 508 +LIYTY+G V +NPY LPIY+ D Sbjct: 105 SLIYTYSGLFCVVINPYKKLPIYSED 130 >Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical protein F11C3.3 protein. Length = 1963 Score = 37.1 bits (82), Expect = 0.008 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYTADRSNCSR 526 LIYTY+G V +NPY LPIYT +C+R Sbjct: 109 LIYTYSGLFCVVINPYKRLPIYT---DSCAR 136 >Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein F11C3.3 protein. Length = 1963 Score = 37.1 bits (82), Expect = 0.008 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYTADRSNCSR 526 LIYTY+G V +NPY LPIYT +C+R Sbjct: 109 LIYTYSGLFCVVINPYKRLPIYT---DSCAR 136 >J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain protein. Length = 1966 Score = 37.1 bits (82), Expect = 0.008 Identities = 17/31 (54%), Positives = 21/31 (67%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYTADRSNCSR 526 LIYTY+G V +NPY LPIYT +C+R Sbjct: 112 LIYTYSGLFCVVINPYKRLPIYT---DSCAR 139 >Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical protein F45G2.2a protein. Length = 1235 Score = 36.7 bits (81), Expect = 0.011 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYT 502 +IYTY+G V +NPY +LPIYT Sbjct: 113 MIYTYSGLFCVFINPYKMLPIYT 135 >Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical protein R06C7.10 protein. Length = 1938 Score = 36.7 bits (81), Expect = 0.011 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYT 502 LIYTY+G V +NPY LPIYT Sbjct: 112 LIYTYSGLFCVVINPYKRLPIYT 134 >Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical protein R06C7.10 protein. Length = 1938 Score = 36.7 bits (81), Expect = 0.011 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYT 502 LIYTY+G V +NPY LPIYT Sbjct: 112 LIYTYSGLFCVVINPYKRLPIYT 134 >Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein T18D3.4 protein. Length = 1947 Score = 36.7 bits (81), Expect = 0.011 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYT 502 LIYTY+G V +NPY LPIYT Sbjct: 109 LIYTYSGLFCVVINPYKRLPIYT 131 >Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein T18D3.4 protein. Length = 1947 Score = 36.7 bits (81), Expect = 0.011 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYT 502 LIYTY+G V +NPY LPIYT Sbjct: 109 LIYTYSGLFCVVINPYKRLPIYT 131 >X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2 protein. Length = 1947 Score = 36.7 bits (81), Expect = 0.011 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYT 502 LIYTY+G V +NPY LPIYT Sbjct: 109 LIYTYSGLFCVVINPYKRLPIYT 131 >X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. Length = 1938 Score = 36.7 bits (81), Expect = 0.011 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYT 502 LIYTY+G V +NPY LPIYT Sbjct: 112 LIYTYSGLFCVVINPYKRLPIYT 134 >AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, unconventional myosinprotein 7 protein. Length = 1887 Score = 36.3 bits (80), Expect = 0.014 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = +2 Query: 437 IYTYTGSILVAVNPYXILPIY 499 IYTY G ILVAVNP+ PIY Sbjct: 196 IYTYIGPILVAVNPFCFFPIY 216 >Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical protein T02C12.1 protein. Length = 1017 Score = 34.7 bits (76), Expect = 0.043 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = +2 Query: 437 IYTYTGSILVAVNPYXILPIY 499 IYTY G +LVAVNPY L IY Sbjct: 40 IYTYIGEVLVAVNPYRQLGIY 60 >X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. Length = 1017 Score = 34.7 bits (76), Expect = 0.043 Identities = 15/21 (71%), Positives = 16/21 (76%) Frame = +2 Query: 437 IYTYTGSILVAVNPYXILPIY 499 IYTY G +LVAVNPY L IY Sbjct: 40 IYTYIGEVLVAVNPYRQLGIY 60 >Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein K12F2.1 protein. Length = 1969 Score = 34.3 bits (75), Expect = 0.056 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYT 502 +IYTY+G V +NPY LPIY+ Sbjct: 114 MIYTYSGLFCVVINPYKRLPIYS 136 >X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3 protein. Length = 1969 Score = 34.3 bits (75), Expect = 0.056 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYT 502 +IYTY+G V +NPY LPIY+ Sbjct: 114 MIYTYSGLFCVVINPYKRLPIYS 136 >U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein F58G4.1 protein. Length = 1974 Score = 34.3 bits (75), Expect = 0.056 Identities = 13/23 (56%), Positives = 17/23 (73%) Frame = +2 Query: 434 LIYTYTGSILVAVNPYXILPIYT 502 +IYTY+G V +NPY LPIY+ Sbjct: 109 MIYTYSGLFCVVINPYKRLPIYS 131 >Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical protein F29D10.4 protein. Length = 1100 Score = 32.3 bits (70), Expect = 0.23 Identities = 11/24 (45%), Positives = 18/24 (75%) Frame = +2 Query: 431 NLIYTYTGSILVAVNPYXILPIYT 502 N I+TY G +L++VNP+ +P +T Sbjct: 41 NSIFTYIGPVLISVNPFKQMPYFT 64 >M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein. Length = 260 Score = 30.7 bits (66), Expect = 0.69 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 443 TYTGSILVAVNPYXILPIYT 502 TY+G V +NPY LPIYT Sbjct: 1 TYSGLFCVVINPYKRLPIYT 20 >M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein. Length = 251 Score = 30.7 bits (66), Expect = 0.69 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = +2 Query: 443 TYTGSILVAVNPYXILPIYT 502 TY+G V +NPY LPIYT Sbjct: 1 TYSGLFCVVINPYKRLPIYT 20 >AL132952-14|CAB63386.1| 257|Caenorhabditis elegans Hypothetical protein Y51H4A.23 protein. Length = 257 Score = 30.3 bits (65), Expect = 0.92 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +1 Query: 436 YLYIHRIDISCGESVS 483 + YIH+IDISCG+ VS Sbjct: 220 FYYIHKIDISCGKQVS 235 >AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, unconventional myosinprotein 8, isoform a protein. Length = 1219 Score = 30.3 bits (65), Expect = 0.92 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +1 Query: 355 VEDMISLGDLHEAGILRNLLIRY-N*KSYLYIHRIDIS 465 VED L L+EA +L N+ +RY N K Y Y+ I IS Sbjct: 67 VEDNCQLMHLNEATLLNNIRLRYQNGKIYSYVANILIS 104 >AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, unconventional myosinprotein 8, isoform b protein. Length = 1144 Score = 30.3 bits (65), Expect = 0.92 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +1 Query: 355 VEDMISLGDLHEAGILRNLLIRY-N*KSYLYIHRIDIS 465 VED L L+EA +L N+ +RY N K Y Y+ I IS Sbjct: 67 VEDNCQLMHLNEATLLNNIRLRYQNGKIYSYVANILIS 104 >Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical protein F28C1.1 protein. Length = 672 Score = 29.9 bits (64), Expect = 1.2 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Frame = +3 Query: 183 AITYGSSRCRGGSSTW-RSEHVFSRRGTSDPGPGRRRQRAMASTGAPXQGDARDLRARSR 359 A+ +G+ + GG+ R SR + P RRR R+ + T + + R RSR Sbjct: 380 AVDWGNLKVGGGNGGMNRRSWSRSRSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSRRRSR 439 Query: 360 GYDLTRRSARGRYTKESP 413 D RRS + SP Sbjct: 440 SRDRQRRSRSRDRRRYSP 457 >U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, unconventional myosinprotein 2, isoform a protein. Length = 1837 Score = 29.9 bits (64), Expect = 1.2 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2 Query: 437 IYTYTGSILVAVNPY 481 IYTY G +LVA+NPY Sbjct: 137 IYTYCGIVLVAINPY 151 >U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, unconventional myosinprotein 2, isoform b protein. Length = 1839 Score = 29.9 bits (64), Expect = 1.2 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2 Query: 437 IYTYTGSILVAVNPY 481 IYTY G +LVA+NPY Sbjct: 137 IYTYCGIVLVAINPY 151 >U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. Length = 1839 Score = 29.9 bits (64), Expect = 1.2 Identities = 11/15 (73%), Positives = 13/15 (86%) Frame = +2 Query: 437 IYTYTGSILVAVNPY 481 IYTY G +LVA+NPY Sbjct: 137 IYTYCGIVLVAINPY 151 >AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spermatogenesis protein15 protein. Length = 1219 Score = 29.9 bits (64), Expect = 1.2 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = +1 Query: 355 VEDMISLGDLHEAGILRNLLIRY-N*KSYLYIHRIDIS 465 VED +L L+EA +L N +RY N K Y Y+ I IS Sbjct: 66 VEDNCALVHLNEATLLNNCRLRYANGKIYTYVANILIS 103 Score = 29.1 bits (62), Expect = 2.1 Identities = 9/18 (50%), Positives = 15/18 (83%) Frame = +2 Query: 437 IYTYTGSILVAVNPYXIL 490 IYTY +IL+++NPY ++ Sbjct: 93 IYTYVANILISINPYQLI 110 >AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical protein Y11D7A.14 protein. Length = 1464 Score = 29.1 bits (62), Expect = 2.1 Identities = 10/24 (41%), Positives = 17/24 (70%) Frame = +2 Query: 431 NLIYTYTGSILVAVNPYXILPIYT 502 N+I+T+ G V +NP+ +PIY+ Sbjct: 110 NVIHTFCGLFCVVINPWRNIPIYS 133 >AC027664-1|AAK18923.1| 326|Caenorhabditis elegans Hypothetical protein EGAP798.1 protein. Length = 326 Score = 29.1 bits (62), Expect = 2.1 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%) Frame = +2 Query: 311 RSAXSRRCTRPPCTESRI*SH---SAICTRPV 397 RSA +C RPPC + I H S +C P+ Sbjct: 180 RSATHSQCARPPCRQCNIVGHTVASGLCESPM 211 >Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical protein ZC247.1 protein. Length = 4404 Score = 28.3 bits (60), Expect = 3.7 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -2 Query: 280 PGPGSDVPRRENTCSDRHVELPPRHRLDPYVIAPGHD 170 PGP + P +NT ++H++ P H LD Y ++ +D Sbjct: 307 PGPSTPKPTSKNTKKEKHIKKFPSH-LD-YPVSESYD 341 >Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical protein ZC247.1 protein. Length = 4404 Score = 28.3 bits (60), Expect = 3.7 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -2 Query: 280 PGPGSDVPRRENTCSDRHVELPPRHRLDPYVIAPGHD 170 PGP + P +NT ++H++ P H LD Y ++ +D Sbjct: 307 PGPSTPKPTSKNTKKEKHIKKFPSH-LD-YPVSESYD 341 >AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical protein ZC247.1 protein. Length = 4404 Score = 28.3 bits (60), Expect = 3.7 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -2 Query: 280 PGPGSDVPRRENTCSDRHVELPPRHRLDPYVIAPGHD 170 PGP + P +NT ++H++ P H LD Y ++ +D Sbjct: 307 PGPSTPKPTSKNTKKEKHIKKFPSH-LD-YPVSESYD 341 >AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical protein Y55F3AM.3a protein. Length = 580 Score = 28.3 bits (60), Expect = 3.7 Identities = 17/54 (31%), Positives = 25/54 (46%) Frame = +3 Query: 249 SRRGTSDPGPGRRRQRAMASTGAPXQGDARDLRARSRGYDLTRRSARGRYTKES 410 SR + D RR R+ + +GD R R+RS+ TRR + R + S Sbjct: 37 SRSRSKDRKSSSRRSRSRSRDRRGDRGDRRRSRSRSKDRRTTRRRSPSRERRRS 90 >Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical protein F08H9.2 protein. Length = 130 Score = 27.5 bits (58), Expect = 6.5 Identities = 22/60 (36%), Positives = 29/60 (48%) Frame = +3 Query: 231 RSEHVFSRRGTSDPGPGRRRQRAMASTGAPXQGDARDLRARSRGYDLTRRSARGRYTKES 410 RS V SR+ T RRR +ST AP AR R+RSR +R +R ++ S Sbjct: 36 RSRSVVSRKTTRTNSLTRRR----SSTKAP--SSARQSRSRSRSRSRSRSKSRSTSSRRS 89 >AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like protease protein 7 protein. Length = 522 Score = 27.1 bits (57), Expect = 8.6 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +3 Query: 285 RRQRAMASTGAPXQGDARDLRARSRG 362 R Q+ + +T AP + +ARDL+ S+G Sbjct: 468 RTQKPVRTTEAPREANARDLKPGSKG 493 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,719,986 Number of Sequences: 27780 Number of extensions: 238958 Number of successful extensions: 741 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 677 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 739 length of database: 12,740,198 effective HSP length: 77 effective length of database: 10,601,138 effective search space used: 1070714938 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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