Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1304
(536 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 81 4e-16
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p... 40 0.001
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr... 40 0.001
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos... 40 0.001
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 38 0.006
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 37 0.008
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 37 0.008
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 37 0.008
Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical p... 37 0.011
Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical p... 37 0.011
Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 37 0.011
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 37 0.011
X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein. 37 0.011
AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain, ... 36 0.014
Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical pr... 35 0.043
X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein. 35 0.043
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 34 0.056
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 34 0.056
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 34 0.056
Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical pr... 32 0.23
M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein. 31 0.69
M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein. 31 0.69
AL132952-14|CAB63386.1| 257|Caenorhabditis elegans Hypothetical... 30 0.92
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 30 0.92
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 30 0.92
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 30 1.2
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 30 1.2
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 30 1.2
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 30 1.2
AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective spe... 30 1.2
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 29 2.1
AC027664-1|AAK18923.1| 326|Caenorhabditis elegans Hypothetical ... 29 2.1
Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical pr... 28 3.7
AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical ... 28 3.7
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 28 3.7
Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical pr... 27 6.5
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 27 8.6
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 81.4 bits (192), Expect = 4e-16
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +1
Query: 265 RIRVRDDDGNEQWLPPERRIKAMHATSVHGVEDMISLGDLHEAGILRNLLIRYN*K-SYL 441
R++V DD GNEQWL +RR++ MH TSV GVEDM LGD HE+ ILRNL IRY K Y
Sbjct: 34 RLKVIDDLGNEQWLSADRRVRLMHPTSVQGVEDMCQLGDFHESAILRNLFIRYREKLIYA 93
Query: 442 YIHRIDISCGESVSXTTDLHGGQIKLFKERK 534
Y I I+ + +I+++K ++
Sbjct: 94 YTGSILIAVNPYMDIAI-YTADEIRMYKRKR 123
Score = 45.2 bits (102), Expect = 3e-05
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 8/132 (6%)
Frame = +2
Query: 164 MVIVTRGDYIWIEPVSGREFDVAIGARVLAARDVXXXXXXXXXXXXXFHRSAXSRRCTRP 343
MV+V++GD+IWIEP E + IGARV+ +D + + R P
Sbjct: 1 MVLVSKGDFIWIEP-GKTEGSIPIGARVI-DQDHGRLKVIDDLGNEQWLSADRRVRLMHP 58
Query: 344 PCTESRI*SHSAICTRPVY*GISSSGTIENLIYTY--------TGSILVAVNPYXILPIY 499
+ +C + S + NL Y TGSIL+AVNPY + IY
Sbjct: 59 TSVQ----GVEDMCQLGDF---HESAILRNLFIRYREKLIYAYTGSILIAVNPYMDIAIY 111
Query: 500 TADRSNCSRREK 535
TAD +R++
Sbjct: 112 TADEIRMYKRKR 123
>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILPIYT---ADRSNCSRREK 535
NL YTY+G V +NPY +PIYT A++ C +R++
Sbjct: 113 NLYYTYSGLFCVVINPYKRIPIYTDTIAEQFKCKKRKE 150
>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical
protein F20G4.3 protein.
Length = 2003
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILPIYT---ADRSNCSRREK 535
NL YTY+G V +NPY +PIYT A++ C +R++
Sbjct: 113 NLYYTYSGLFCVVINPYKRIPIYTDTIAEQFKCKKRKE 150
>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
heavy chain II protein.
Length = 2003
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/38 (44%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILPIYT---ADRSNCSRREK 535
NL YTY+G V +NPY +PIYT A++ C +R++
Sbjct: 113 NLYYTYSGLFCVVINPYKRIPIYTDTIAEQFKCKKRKE 150
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 37.5 bits (83), Expect = 0.006
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILPIYTAD 508
+LIYTY+G V +NPY LPIY+ D
Sbjct: 105 SLIYTYSGLFCVVINPYKKLPIYSED 130
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYTADRSNCSR 526
LIYTY+G V +NPY LPIYT +C+R
Sbjct: 109 LIYTYSGLFCVVINPYKRLPIYT---DSCAR 136
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYTADRSNCSR 526
LIYTY+G V +NPY LPIYT +C+R
Sbjct: 109 LIYTYSGLFCVVINPYKRLPIYT---DSCAR 136
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 37.1 bits (82), Expect = 0.008
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYTADRSNCSR 526
LIYTY+G V +NPY LPIYT +C+R
Sbjct: 112 LIYTYSGLFCVVINPYKRLPIYT---DSCAR 139
>Z93382-10|CAB07611.2| 1235|Caenorhabditis elegans Hypothetical
protein F45G2.2a protein.
Length = 1235
Score = 36.7 bits (81), Expect = 0.011
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
+IYTY+G V +NPY +LPIYT
Sbjct: 113 MIYTYSGLFCVFINPYKMLPIYT 135
>Z71266-12|CAA95848.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
LIYTY+G V +NPY LPIYT
Sbjct: 112 LIYTYSGLFCVVINPYKRLPIYT 134
>Z71261-8|CAA95806.1| 1938|Caenorhabditis elegans Hypothetical
protein R06C7.10 protein.
Length = 1938
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
LIYTY+G V +NPY LPIYT
Sbjct: 112 LIYTYSGLFCVVINPYKRLPIYT 134
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
LIYTY+G V +NPY LPIYT
Sbjct: 109 LIYTYSGLFCVVINPYKRLPIYT 131
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical
protein T18D3.4 protein.
Length = 1947
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
LIYTY+G V +NPY LPIYT
Sbjct: 109 LIYTYSGLFCVVINPYKRLPIYT 131
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain
2 protein.
Length = 1947
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
LIYTY+G V +NPY LPIYT
Sbjct: 109 LIYTYSGLFCVVINPYKRLPIYT 131
>X08065-1|CAA30854.1| 1938|Caenorhabditis elegans myosin 1 protein.
Length = 1938
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
LIYTY+G V +NPY LPIYT
Sbjct: 112 LIYTYSGLFCVVINPYKRLPIYT 134
>AF067217-2|AAF99977.1| 1887|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 7 protein.
Length = 1887
Score = 36.3 bits (80), Expect = 0.014
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 437 IYTYTGSILVAVNPYXILPIY 499
IYTY G ILVAVNP+ PIY
Sbjct: 196 IYTYIGPILVAVNPFCFFPIY 216
>Z35603-1|CAA84673.1| 1017|Caenorhabditis elegans Hypothetical
protein T02C12.1 protein.
Length = 1017
Score = 34.7 bits (76), Expect = 0.043
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 437 IYTYTGSILVAVNPYXILPIY 499
IYTY G +LVAVNPY L IY
Sbjct: 40 IYTYIGEVLVAVNPYRQLGIY 60
>X75564-1|CAA53244.1| 1017|Caenorhabditis elegans myosin IA protein.
Length = 1017
Score = 34.7 bits (76), Expect = 0.043
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = +2
Query: 437 IYTYTGSILVAVNPYXILPIY 499
IYTY G +LVAVNPY L IY
Sbjct: 40 IYTYIGEVLVAVNPYRQLGIY 60
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical
protein K12F2.1 protein.
Length = 1969
Score = 34.3 bits (75), Expect = 0.056
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
+IYTY+G V +NPY LPIY+
Sbjct: 114 MIYTYSGLFCVVINPYKRLPIYS 136
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain
3 protein.
Length = 1969
Score = 34.3 bits (75), Expect = 0.056
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
+IYTY+G V +NPY LPIY+
Sbjct: 114 MIYTYSGLFCVVINPYKRLPIYS 136
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical
protein F58G4.1 protein.
Length = 1974
Score = 34.3 bits (75), Expect = 0.056
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +2
Query: 434 LIYTYTGSILVAVNPYXILPIYT 502
+IYTY+G V +NPY LPIY+
Sbjct: 109 MIYTYSGLFCVVINPYKRLPIYS 131
>Z75952-2|CAB00095.1| 1100|Caenorhabditis elegans Hypothetical
protein F29D10.4 protein.
Length = 1100
Score = 32.3 bits (70), Expect = 0.23
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILPIYT 502
N I+TY G +L++VNP+ +P +T
Sbjct: 41 NSIFTYIGPVLISVNPFKQMPYFT 64
>M37233-1|AAA28121.1| 260|Caenorhabditis elegans myosin II protein.
Length = 260
Score = 30.7 bits (66), Expect = 0.69
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 443 TYTGSILVAVNPYXILPIYT 502
TY+G V +NPY LPIYT
Sbjct: 1 TYSGLFCVVINPYKRLPIYT 20
>M37232-1|AAA28119.1| 251|Caenorhabditis elegans myosin I protein.
Length = 251
Score = 30.7 bits (66), Expect = 0.69
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 443 TYTGSILVAVNPYXILPIYT 502
TY+G V +NPY LPIYT
Sbjct: 1 TYSGLFCVVINPYKRLPIYT 20
>AL132952-14|CAB63386.1| 257|Caenorhabditis elegans Hypothetical
protein Y51H4A.23 protein.
Length = 257
Score = 30.3 bits (65), Expect = 0.92
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 436 YLYIHRIDISCGESVS 483
+ YIH+IDISCG+ VS
Sbjct: 220 FYYIHKIDISCGKQVS 235
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 30.3 bits (65), Expect = 0.92
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 355 VEDMISLGDLHEAGILRNLLIRY-N*KSYLYIHRIDIS 465
VED L L+EA +L N+ +RY N K Y Y+ I IS
Sbjct: 67 VEDNCQLMHLNEATLLNNIRLRYQNGKIYSYVANILIS 104
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 30.3 bits (65), Expect = 0.92
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 355 VEDMISLGDLHEAGILRNLLIRY-N*KSYLYIHRIDIS 465
VED L L+EA +L N+ +RY N K Y Y+ I IS
Sbjct: 67 VEDNCQLMHLNEATLLNNIRLRYQNGKIYSYVANILIS 104
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 29.9 bits (64), Expect = 1.2
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 183 AITYGSSRCRGGSSTW-RSEHVFSRRGTSDPGPGRRRQRAMASTGAPXQGDARDLRARSR 359
A+ +G+ + GG+ R SR + P RRR R+ + T + + R RSR
Sbjct: 380 AVDWGNLKVGGGNGGMNRRSWSRSRSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSRRRSR 439
Query: 360 GYDLTRRSARGRYTKESP 413
D RRS + SP
Sbjct: 440 SRDRQRRSRSRDRRRYSP 457
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 437 IYTYTGSILVAVNPY 481
IYTY G +LVA+NPY
Sbjct: 137 IYTYCGIVLVAINPY 151
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 437 IYTYTGSILVAVNPY 481
IYTY G +LVA+NPY
Sbjct: 137 IYTYCGIVLVAINPY 151
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2
Query: 437 IYTYTGSILVAVNPY 481
IYTY G +LVA+NPY
Sbjct: 137 IYTYCGIVLVAINPY 151
>AF098989-1|AAK18955.1| 1219|Caenorhabditis elegans Defective
spermatogenesis protein15 protein.
Length = 1219
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 355 VEDMISLGDLHEAGILRNLLIRY-N*KSYLYIHRIDIS 465
VED +L L+EA +L N +RY N K Y Y+ I IS
Sbjct: 66 VEDNCALVHLNEATLLNNCRLRYANGKIYTYVANILIS 103
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 437 IYTYTGSILVAVNPYXIL 490
IYTY +IL+++NPY ++
Sbjct: 93 IYTYVANILISINPYQLI 110
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILPIYT 502
N+I+T+ G V +NP+ +PIY+
Sbjct: 110 NVIHTFCGLFCVVINPWRNIPIYS 133
>AC027664-1|AAK18923.1| 326|Caenorhabditis elegans Hypothetical
protein EGAP798.1 protein.
Length = 326
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +2
Query: 311 RSAXSRRCTRPPCTESRI*SH---SAICTRPV 397
RSA +C RPPC + I H S +C P+
Sbjct: 180 RSATHSQCARPPCRQCNIVGHTVASGLCESPM 211
>Z81594-7|CAJ55256.1| 4404|Caenorhabditis elegans Hypothetical
protein ZC247.1 protein.
Length = 4404
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 280 PGPGSDVPRRENTCSDRHVELPPRHRLDPYVIAPGHD 170
PGP + P +NT ++H++ P H LD Y ++ +D
Sbjct: 307 PGPSTPKPTSKNTKKEKHIKKFPSH-LD-YPVSESYD 341
>Z80221-3|CAB02312.2| 4404|Caenorhabditis elegans Hypothetical
protein ZC247.1 protein.
Length = 4404
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 280 PGPGSDVPRRENTCSDRHVELPPRHRLDPYVIAPGHD 170
PGP + P +NT ++H++ P H LD Y ++ +D
Sbjct: 307 PGPSTPKPTSKNTKKEKHIKKFPSH-LD-YPVSESYD 341
>AL032619-1|CAJ55259.1| 4404|Caenorhabditis elegans Hypothetical
protein ZC247.1 protein.
Length = 4404
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -2
Query: 280 PGPGSDVPRRENTCSDRHVELPPRHRLDPYVIAPGHD 170
PGP + P +NT ++H++ P H LD Y ++ +D
Sbjct: 307 PGPSTPKPTSKNTKKEKHIKKFPSH-LD-YPVSESYD 341
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 249 SRRGTSDPGPGRRRQRAMASTGAPXQGDARDLRARSRGYDLTRRSARGRYTKES 410
SR + D RR R+ + +GD R R+RS+ TRR + R + S
Sbjct: 37 SRSRSKDRKSSSRRSRSRSRDRRGDRGDRRRSRSRSKDRRTTRRRSPSRERRRS 90
>Z77657-1|CAB01144.1| 130|Caenorhabditis elegans Hypothetical
protein F08H9.2 protein.
Length = 130
Score = 27.5 bits (58), Expect = 6.5
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +3
Query: 231 RSEHVFSRRGTSDPGPGRRRQRAMASTGAPXQGDARDLRARSRGYDLTRRSARGRYTKES 410
RS V SR+ T RRR +ST AP AR R+RSR +R +R ++ S
Sbjct: 36 RSRSVVSRKTTRTNSLTRRR----SSTKAP--SSARQSRSRSRSRSRSRSKSRSTSSRRS 89
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 285 RRQRAMASTGAPXQGDARDLRARSRG 362
R Q+ + +T AP + +ARDL+ S+G
Sbjct: 468 RTQKPVRTTEAPREANARDLKPGSKG 493
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,719,986
Number of Sequences: 27780
Number of extensions: 238958
Number of successful extensions: 741
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 739
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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