Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1304
(536 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:4... 38 0.003
At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identi... 38 0.006
At1g04160.1 68414.m00406 myosin family protein contains Pfam pro... 38 0.006
At4g33200.1 68417.m04727 myosin, putative similar to myosin (GI:... 37 0.007
At3g58160.1 68416.m06485 myosin heavy chain, putative similar to... 37 0.007
At1g54560.1 68414.m06222 myosin, putative similar to myosin GI:4... 37 0.007
At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to... 37 0.007
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 36 0.013
At4g28710.1 68417.m04106 myosin heavy chain, putative similar to... 36 0.013
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 36 0.013
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 36 0.013
At1g04600.1 68414.m00454 myosin, putative similar to myosin (GI:... 36 0.013
At2g20290.1 68415.m02370 myosin, putative similar to myosin (GI:... 35 0.030
At3g19960.1 68416.m02526 myosin (ATM) nearly identical to myosin... 33 0.12
At1g50360.1 68414.m05645 myosin family protein contains Pfam pro... 33 0.12
At5g54280.1 68418.m06761 myosin heavy chain, putative similar to... 31 0.64
At3g04260.1 68416.m00450 SAP domain-containing protein contains ... 30 1.1
At4g27370.1 68417.m03929 myosin family protein contains Pfam pro... 29 1.5
At3g49800.1 68416.m05445 BSD domain-containing protein contains ... 29 2.6
At3g42820.1 68416.m04484 hypothetical protein hypothetical prote... 27 6.0
At2g27920.1 68415.m03384 serine carboxypeptidase S10 family prot... 27 6.0
>At1g17580.1 68414.m02165 myosin, putative similar to myosin
GI:433663 from (Arabidopsis thaliana)
Length = 1520
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/27 (66%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP-IYTAD 508
N IYTYTG+IL+AVNP+ LP IY D
Sbjct: 86 NEIYTYTGNILIAVNPFQRLPHIYETD 112
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRY 423
GV+DM L LHE G+LRNL RY
Sbjct: 60 GVDDMTKLSYLHEPGVLRNLETRY 83
>At5g43900.1 68418.m05368 myosin heavy chain (MYA2) nearly identical
to PIR|S51824 myosin heavy chain MYA2 [Arabidopsis
thaliana]
Length = 1505
Score = 37.5 bits (83), Expect = 0.006
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP 493
N IYTYTGSIL+AVNP+ LP
Sbjct: 89 NEIYTYTGSILIAVNPFRRLP 109
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRYN 426
GV+DM L LHE G+L+NL RY+
Sbjct: 63 GVDDMTRLAYLHEPGVLQNLHSRYD 87
>At1g04160.1 68414.m00406 myosin family protein contains Pfam
profiles: PF02736 myosin N-terminal SH3-like domain,
PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif, PF01843: DIL domain
Length = 1500
Score = 37.5 bits (83), Expect = 0.006
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP 493
N IYTYTGSIL+AVNP+ LP
Sbjct: 89 NEIYTYTGSILIAVNPFRRLP 109
Score = 33.9 bits (74), Expect = 0.069
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRYN 426
GVEDM L LHE G+L+NL RY+
Sbjct: 63 GVEDMTRLAYLHEPGVLQNLQSRYD 87
>At4g33200.1 68417.m04727 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]
Length = 1522
Score = 37.1 bits (82), Expect = 0.007
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 265 RIRVRDDDGNEQWLPPERRIKAMHATSVH-GVEDMISLGDLHEAGILRNLLIRY 423
++ V G + ++ PE+ + H GV+DM L LHEAG+L NL RY
Sbjct: 38 KLHVETSTGKKVFVSPEKLFRRDPDDEEHNGVDDMTKLTYLHEAGVLYNLQRRY 91
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP 493
N IYTYTGSIL+AVNP+ LP
Sbjct: 94 NDIYTYTGSILIAVNPFKKLP 114
>At3g58160.1 68416.m06485 myosin heavy chain, putative similar to
myosin heavy chain [Arabidopsis thaliana]
gi|602328|emb|CAA84067.
Length = 1242
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP-IYTAD 508
N IYTYTG+IL+AVNP+ LP +Y A+
Sbjct: 87 NEIYTYTGNILIAVNPFQGLPHLYDAE 113
Score = 32.7 bits (71), Expect = 0.16
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 256 EGRRIRVRDDDGNEQWLPPERRIKAMHATSVHGVEDMISLGDLHEAGILRNLLIRY 423
+G ++ +DG + R GVEDM L LHE +L NL RY
Sbjct: 29 KGEEAEIKTNDGRDVIANLSRLYPKDTEAPSEGVEDMTRLSYLHEPAVLDNLATRY 84
>At1g54560.1 68414.m06222 myosin, putative similar to myosin
GI:433663 from [Arabidopsis thaliana]
Length = 1529
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP-IYTA 505
N IYTYTG+IL+A+NP+ LP IY A
Sbjct: 92 NEIYTYTGNILIAINPFQRLPHIYDA 117
Score = 35.1 bits (77), Expect = 0.030
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRY 423
GV+DM L LHE G+L+NL IRY
Sbjct: 66 GVDDMTKLSYLHEPGVLQNLKIRY 89
>At1g08730.1 68414.m00969 myosin heavy chain (PCR43) identical to
myosin heavy chain PCR43 (PIR:T00727) [Arabidopsis
thaliana]; similar to ESTs gb|R30087 and gb|AA394762
Length = 1538
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/26 (65%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP-IYTA 505
N IYTYTG+IL+A+NP+ LP IY A
Sbjct: 97 NEIYTYTGNILIAINPFQRLPHIYDA 122
Score = 35.1 bits (77), Expect = 0.030
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRY 423
GV+DM L LHE G+L+NL IRY
Sbjct: 71 GVDDMTKLSYLHEPGVLQNLKIRY 94
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP 493
N IYTYTG+IL+AVNP+ LP
Sbjct: 103 NEIYTYTGNILIAVNPFQRLP 123
Score = 33.9 bits (74), Expect = 0.069
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRY 423
GV+DM L LHE G+L NL +RY
Sbjct: 77 GVDDMTKLSYLHEPGVLNNLAMRY 100
>At4g28710.1 68417.m04106 myosin heavy chain, putative similar to
myosin [Arabidopsis thaliana] gi|499047|emb|CAA84066.
Length = 899
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP 493
N IYTYTG+IL+AVNP+ LP
Sbjct: 88 NEIYTYTGNILIAVNPFRRLP 108
Score = 30.3 bits (65), Expect = 0.85
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRYN 426
GV+DM L LHE G+L+N+ R++
Sbjct: 62 GVDDMTRLAYLHEPGVLQNMKSRFD 86
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP 493
N IYTYTG+IL+AVNP+ LP
Sbjct: 105 NEIYTYTGNILIAVNPFKRLP 125
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRYN 426
GV+DM L LHE G+L NL RYN
Sbjct: 79 GVDDMTKLAYLHEPGVLLNLKARYN 103
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP 493
N IYTYTG+IL+AVNP+ LP
Sbjct: 89 NEIYTYTGNILIAVNPFQRLP 109
Score = 30.3 bits (65), Expect = 0.85
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRY 423
GV+DM L LHE G+L NL R+
Sbjct: 63 GVDDMTKLAYLHEPGVLHNLDCRF 86
>At1g04600.1 68414.m00454 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1730
Score = 36.3 bits (80), Expect = 0.013
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +2
Query: 431 NLIYTYTGSILVAVNPYXILP 493
N IYTYTG+IL+AVNP+ LP
Sbjct: 88 NEIYTYTGNILIAVNPFKRLP 108
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRYN 426
GV+DM L LHE G+L NL RYN
Sbjct: 62 GVDDMTKLAYLHEPGVLLNLKCRYN 86
>At2g20290.1 68415.m02370 myosin, putative similar to myosin
(GI:499047) [Arabidopsis thaliana]
Length = 1493
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 437 IYTYTGSILVAVNPYXILP 493
IYTYTG+IL+AVNP+ LP
Sbjct: 101 IYTYTGNILIAVNPFKQLP 119
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRY 423
GV+DM +L LHE G+L+NL RY
Sbjct: 73 GVDDMTTLAYLHEPGVLQNLKSRY 96
>At3g19960.1 68416.m02526 myosin (ATM) nearly identical to myosin
[Arabidopsis thaliana] GI:6491702; similar to myosin
GI:6491702 from [Arabidopsis thaliana] ;contains Pfam
profiles: PF00063: myosin head (motor domain), PF00612:
IQ calmodulin-binding motif; identical to cDNA myosin
(ATM) GI:297068
Length = 1166
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 428 ENLIYTYTGSILVAVNPYXILPIY 499
+++IYT G +LVAVNP+ +P+Y
Sbjct: 191 QDMIYTKAGPVLVAVNPFKEVPLY 214
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRYN 426
GV+D++ L L+E +L NL RYN
Sbjct: 166 GVDDLMQLSYLNEPSVLYNLNYRYN 190
>At1g50360.1 68414.m05645 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif
Length = 1153
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +2
Query: 428 ENLIYTYTGSILVAVNPYXILPIY 499
+++IYT G +LVAVNP+ +P+Y
Sbjct: 183 QDMIYTKAGPVLVAVNPFKEVPLY 206
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 352 GVEDMISLGDLHEAGILRNLLIRYN 426
GV+D++ L L+E +L NL RYN
Sbjct: 158 GVDDLMQLSYLNEPAVLYNLEYRYN 182
>At5g54280.1 68418.m06761 myosin heavy chain, putative similar to
myosin [Arabidopsis thaliana] gi|499045|emb|CAA84065
Length = 1030
Score = 30.7 bits (66), Expect = 0.64
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +1
Query: 346 VHGVEDMISLGDLHEAGILRNLLIRY 423
+ GVED+I L L+E +L NL +RY
Sbjct: 23 LEGVEDLIQLSYLNEPSVLYNLRVRY 48
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 425 IENLIYTYTGSILVAVNPYXILPIYTAD 508
++++IY+ G +L+AVNP+ + IY D
Sbjct: 49 LQDVIYSKAGPVLIAVNPFKNVEIYGND 76
>At3g04260.1 68416.m00450 SAP domain-containing protein contains
Pfam domain PF02037: SAP domain
Length = 913
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = +1
Query: 241 TCSRGEGRRIRVRDDDGNEQWLP--PERRIKAMHATSVHGVEDMISLGDL 384
T RG+ +DD +E W P P K M V V DM ++ D+
Sbjct: 721 TKKRGKRASRMTLEDDADEDWFPEEPFEAFKEMRERKVFDVADMYTIADV 770
>At4g27370.1 68417.m03929 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif
Length = 1126
Score = 29.5 bits (63), Expect = 1.5
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 428 ENLIYTYTGSILVAVNPYXILPIY 499
++LIY+ G +L+AVNP+ + IY
Sbjct: 190 QDLIYSKAGPVLIAVNPFKNVQIY 213
Score = 28.7 bits (61), Expect = 2.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 346 VHGVEDMISLGDLHEAGILRNLLIRYN 426
+ GVED+ L L+E +L NL +RY+
Sbjct: 163 LEGVEDLTQLSYLNEPSLLYNLRVRYS 189
>At3g49800.1 68416.m05445 BSD domain-containing protein contains
Pfam profile PF03909: BSD domain
Length = 428
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +1
Query: 262 RRIRVRDDDGNEQWLPPERRIKAMHATSVHGVEDM---ISLGDLHE 390
R I V+ DD + WL E + AT+ H V+D+ +S DL E
Sbjct: 372 RVIDVQVDDDADDWLKDEDNAGTVSATTNHLVQDVDEDVSFSDLEE 417
>At3g42820.1 68416.m04484 hypothetical protein hypothetical proteins
- Arabidopsis thaliana
Length = 906
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = -2
Query: 262 VPRRENTCSDRHVELPPRH 206
VP ENTCSDR VE P H
Sbjct: 461 VPMEENTCSDR-VEAPNPH 478
>At2g27920.1 68415.m03384 serine carboxypeptidase S10 family protein
similar to retinoid-inducible serine carboxypeptidase
precursor (GI:15146429) [Mus musculus]
Length = 461
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 241 TCSRGEGRRIRVRDDDGNEQWLPPERRIKA 330
+C+ GE + +R + DG+E W E R KA
Sbjct: 16 SCTNGETKHVRKINSDGSEAWGYVEVRPKA 45
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,146,158
Number of Sequences: 28952
Number of extensions: 223445
Number of successful extensions: 573
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 993966856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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