Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1302
(601 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HQB9 Cluster: Nucleosome assembly protein isoform 1; ... 118 1e-25
UniRef50_Q4R6R2 Cluster: Testis cDNA, clone: QtsA-17351, similar... 46 0.001
UniRef50_P55209 Cluster: Nucleosome assembly protein 1-like 1; n... 38 0.18
UniRef50_Q16HP8 Cluster: Nucleosome assembly protein; n=2; Aedes... 29 0.25
UniRef50_A3LZ21 Cluster: Predicted protein; n=1; Pichia stipitis... 36 0.73
UniRef50_UPI00006A2268 Cluster: Nucleosome assembly protein 1-li... 35 1.7
UniRef50_Q9U602 Cluster: Putative nucleosome binding protein; n=... 34 2.2
UniRef50_A3LWY3 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 34 2.2
UniRef50_A0JGX7 Cluster: Nucleosome assembly protein 2; n=1; Tak... 33 3.9
UniRef50_Q1HR22 Cluster: Nucleosome assembly protein NAP-17; n=2... 33 3.9
UniRef50_Q6M0A6 Cluster: Putative uncharacterized protein precur... 33 3.9
UniRef50_Q339S5 Cluster: Transposon protein, putative, CACTA, En... 33 5.1
UniRef50_A6GHN8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
>UniRef50_Q1HQB9 Cluster: Nucleosome assembly protein isoform 1;
n=7; Coelomata|Rep: Nucleosome assembly protein isoform
1 - Bombyx mori (Silk moth)
Length = 395
Score = 118 bits (284), Expect = 1e-25
Identities = 56/83 (67%), Positives = 58/83 (69%)
Frame = +2
Query: 353 LQASLLKSDALIVNGTYEPNDDECLNPWRDDTEKEELASGGTXXXXXXXXXXXXXXAI*P 532
L L + ALIVNGTYEPNDDECLNPWRDDTE+EELA AI P
Sbjct: 98 LYKPLYEKRALIVNGTYEPNDDECLNPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEP 157
Query: 533 PMDPNVKGIPDFWYNIFRNVSML 601
PMDPNVKGIPDFWYNIFRNVSML
Sbjct: 158 PMDPNVKGIPDFWYNIFRNVSML 180
Score = 97.1 bits (231), Expect = 3e-19
Identities = 49/65 (75%), Positives = 49/65 (75%)
Frame = +1
Query: 61 MGTVERSGDDHTXXXXXXXXXXXXXXXXLAQHLLKSGVTRNEMIAAITNRLHAEAMASLP 240
MGTVERSGDDHT LAQHLLKSGVTRNEMIAAITNRLHAEAMASLP
Sbjct: 1 MGTVERSGDDHTSEMESAEEEEVVGSGELAQHLLKSGVTRNEMIAAITNRLHAEAMASLP 60
Query: 241 PNVRR 255
PNVRR
Sbjct: 61 PNVRR 65
Score = 63.3 bits (147), Expect = 4e-09
Identities = 41/91 (45%), Positives = 47/91 (51%)
Frame = +3
Query: 240 PECSSRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXATXXXXXXXXXXXXX 419
P RIRALRTLQKEFVDIEAKFYSEVHA
Sbjct: 61 PNVRRRIRALRTLQKEFVDIEAKFYSEVHALECKYEKLYKPLYEKRALIVNGTYEPNDDE 120
Query: 420 NVSTHGVMTLKKKS*PRAVQNAAITEGEEKR 512
++ T +++ RAVQNAAITEGEEK+
Sbjct: 121 CLNPWRDDT-EEEELARAVQNAAITEGEEKK 150
>UniRef50_Q4R6R2 Cluster: Testis cDNA, clone: QtsA-17351, similar to
human nucleosome assembly protein 1-like 4 (NAP1L4),;
n=5; Euteleostomi|Rep: Testis cDNA, clone: QtsA-17351,
similar to human nucleosome assembly protein 1-like 4
(NAP1L4), - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 217
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/71 (35%), Positives = 33/71 (46%)
Frame = +2
Query: 389 VNGTYEPNDDECLNPWRDDTEKEELASGGTXXXXXXXXXXXXXXAI*PPMDPNVKGIPDF 568
+ G EP D E + W + E+EE +G +PN KGIP+F
Sbjct: 110 ITGDVEPTDAE--SEWHSENEEEEKLAGDMKNKVVITEKEAATAE-----EPNPKGIPEF 162
Query: 569 WYNIFRNVSML 601
W+ IFRNV ML
Sbjct: 163 WFTIFRNVDML 173
Score = 33.5 bits (73), Expect = 3.9
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = +3
Query: 189 DSGHHKSPSCRSDGIPTPECSSRIRALRTLQKEFVDIEAKFYSEVH 326
DS H +PS + +P RI AL+ LQ IEAKFY EVH
Sbjct: 46 DSVPH-TPSSYIETLPKA-VKRRINALKQLQVRCAHIEAKFYEEVH 89
>UniRef50_P55209 Cluster: Nucleosome assembly protein 1-like 1;
n=90; Eumetazoa|Rep: Nucleosome assembly protein 1-like
1 - Homo sapiens (Human)
Length = 391
Score = 37.9 bits (84), Expect = 0.18
Identities = 23/72 (31%), Positives = 35/72 (48%)
Frame = +2
Query: 386 IVNGTYEPNDDECLNPWRDDTEKEELASGGTXXXXXXXXXXXXXXAI*PPMDPNVKGIPD 565
I+N YEP ++EC W+ D E++E++ DP KGIP+
Sbjct: 120 IINAIYEPTEEEC--EWKPD-EEDEISEELKEKAKIEDEKKDEEKE-----DP--KGIPE 169
Query: 566 FWYNIFRNVSML 601
FW +F+NV +L
Sbjct: 170 FWLTVFKNVDLL 181
Score = 33.1 bits (72), Expect = 5.1
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 255 RIRALRTLQKEFVDIEAKFYSEVH 326
R+ AL+ LQ + IEAKFY EVH
Sbjct: 77 RVNALKNLQVKCAQIEAKFYEEVH 100
>UniRef50_Q16HP8 Cluster: Nucleosome assembly protein; n=2; Aedes
aegypti|Rep: Nucleosome assembly protein - Aedes aegypti
(Yellowfever mosquito)
Length = 325
Score = 28.7 bits (61), Expect(2) = 0.25
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +2
Query: 533 PMDPNVKGIPDFWYNIFRNVSML 601
P + KGIPDFW +F +L
Sbjct: 132 PSEGQPKGIPDFWLTVFTKAPLL 154
Score = 27.9 bits (59), Expect(2) = 0.25
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 335 MQI*KTLQASLLKSDALIVNGTYEPNDDECLNPWRDDTEKEE 460
M+ KTL A L + IV+G+YEP + LNP +T E
Sbjct: 94 MEFQKTLGA-LYEKRKQIVSGSYEPIRKDLLNPEEYETSPSE 134
>UniRef50_A3LZ21 Cluster: Predicted protein; n=1; Pichia
stipitis|Rep: Predicted protein - Pichia stipitis
(Yeast)
Length = 416
Score = 35.9 bits (79), Expect = 0.73
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = -1
Query: 580 YVVPKVWDTLYIGIHWRLDSLVILFSSPSVMAAFCTARG*LFFFSVITPWVE-TFIIIRF 404
YVV + W T+Y+ HWRLD +V + S +A+F L F+S +VE FI+ R
Sbjct: 336 YVVLQWWATIYLDHHWRLDLIVGMLYS---IASFSF----LLFWSRGLSFVERNFILARK 388
Query: 403 ICAIHNKSVA 374
C N S A
Sbjct: 389 RCDFKNGSTA 398
>UniRef50_UPI00006A2268 Cluster: Nucleosome assembly protein 1-like
4 (Nucleosome assembly protein 2) (NAP2).; n=3;
Tetrapoda|Rep: Nucleosome assembly protein 1-like 4
(Nucleosome assembly protein 2) (NAP2). - Xenopus
tropicalis
Length = 374
Score = 34.7 bits (76), Expect = 1.7
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 551 KGIPDFWYNIFRNVSML 601
KGIPDFW IFRNV M+
Sbjct: 143 KGIPDFWLTIFRNVDMI 159
>UniRef50_Q9U602 Cluster: Putative nucleosome binding protein; n=1;
Anisakis simplex|Rep: Putative nucleosome binding
protein - Anisakis simplex (Herring worm)
Length = 321
Score = 34.3 bits (75), Expect = 2.2
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = +2
Query: 386 IVNGTYEPNDDECLNPWRDDTEKEELASGGTXXXXXXXXXXXXXXAI*PPMDPNVKGIPD 565
IV G +EP D+EC P + +EE+ A P KG+PD
Sbjct: 69 IVTGEHEPTDEECNYPIINGLTEEEVKK--------------MDEASAPEPSEGTKGVPD 114
Query: 566 FWYNIFRNVSML 601
FW N+ ++V L
Sbjct: 115 FWLNLLKSVDHL 126
Score = 33.5 bits (73), Expect = 3.9
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 255 RIRALRTLQKEFVDIEAKFYSEVH 326
RI+AL+ LQ E + +EAKFY+ VH
Sbjct: 26 RIQALKKLQLEGIHVEAKFYARVH 49
>UniRef50_A3LWY3 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 405
Score = 34.3 bits (75), Expect = 2.2
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -1
Query: 580 YVVPKVWDTLYIGIHWRLDSLV-ILFSSPSVMAAFCTARG 464
+V + W T+Y+ HWRLD +V +L++ S +C RG
Sbjct: 325 FVALQWWATIYLDHHWRLDLVVGMLYAITSFTLLYCWPRG 364
>UniRef50_A0JGX7 Cluster: Nucleosome assembly protein 2; n=1;
Takifugu rubripes|Rep: Nucleosome assembly protein 2 -
Fugu rubripes (Japanese pufferfish) (Takifugu rubripes)
Length = 84
Score = 33.5 bits (73), Expect = 3.9
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 255 RIRALRTLQKEFVDIEAKFYSEVH 326
R+ AL+ LQ + +IEAKFY EVH
Sbjct: 37 RVHALKRLQVQCANIEAKFYEEVH 60
>UniRef50_Q1HR22 Cluster: Nucleosome assembly protein NAP-17; n=2;
Culicidae|Rep: Nucleosome assembly protein NAP-17 -
Aedes aegypti (Yellowfever mosquito)
Length = 395
Score = 33.5 bits (73), Expect = 3.9
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +3
Query: 255 RIRALRTLQKEFVDIEAKFYSEVHA 329
+I AL+ LQK+++ +EAKF+ EV+A
Sbjct: 55 KINALKHLQKKYLSLEAKFFEEVYA 79
>UniRef50_Q6M0A6 Cluster: Putative uncharacterized protein
precursor; n=2; Methanococcus maripaludis|Rep: Putative
uncharacterized protein precursor - Methanococcus
maripaludis
Length = 611
Score = 33.5 bits (73), Expect = 3.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 371 KSDALIVNGTYEPNDDECLNPWRDDTEKEELASGGT 478
K++ L++ GT+E D LN W D+T E S GT
Sbjct: 386 KNEPLMITGTFEKVQDLNLNLWVDNTSLENFNSNGT 421
>UniRef50_Q339S5 Cluster: Transposon protein, putative, CACTA,
En/Spm sub-class; n=3; Oryza sativa (japonica
cultivar-group)|Rep: Transposon protein, putative,
CACTA, En/Spm sub-class - Oryza sativa subsp. japonica
(Rice)
Length = 981
Score = 33.1 bits (72), Expect = 5.1
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 228 GIPTPECSSRIRALRTL-QKEFVDIEAKFYSEVH 326
GIP P R+ T+ +K FVD+E KF SE H
Sbjct: 814 GIPVPRHEGRLTGRGTVGKKRFVDLEYKFVSEAH 847
>UniRef50_A6GHN8 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 36
Score = 32.3 bits (70), Expect = 9.0
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 192 SGHHKSPSCRSDGIPTPECSSRIRALRTLQKE 287
S H P DG+P P S RI ALR L +E
Sbjct: 3 SEHPSKPLLADDGLPLPVDSERIEALRVLSRE 34
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,994,459
Number of Sequences: 1657284
Number of extensions: 10273214
Number of successful extensions: 24582
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24577
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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