Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1302
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.1  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.9  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   7.9  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -2

Query: 363  EACKVFHICIRVHVLHCKTWPQCRQTPSE 277
            E+C  F++C+  H++     P     P E
Sbjct: 1216 ESCSSFYVCVNGHLVPQNCAPGLHYNPEE 1244


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 301 RPSFTVKYMHSNAN 342
           +P FT KY H N N
Sbjct: 57  QPGFTGKYCHENIN 70


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 308 LGLNVDKLLLKSSQGADSRRTFGGR 234
           L +N  K+L+KS    DS+   GG+
Sbjct: 496 LDINTWKMLVKSFDAIDSKLQTGGK 520


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 283 RSLSTLRPSFTVKYMH 330
           R + +LRP  T KY H
Sbjct: 281 RCIFSLRPGLTHKYTH 296


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 260 PRLENSSEGVCRH*GQVLQ*STCT 331
           P   N S+GVC   G V   S C+
Sbjct: 433 PESGNESDGVCTKEGIVRDPSDCS 456


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 537 WIPM*RVSQTFGTTYSGM 590
           W+ +  + Q  G  YSGM
Sbjct: 263 WVDLSHMMQQLGKAYSGM 280


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 537 WIPM*RVSQTFGTTYSGM 590
           W+ +  + Q  G  YSGM
Sbjct: 263 WVDLSHMMQQLGKAYSGM 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,882
Number of Sequences: 336
Number of extensions: 2680
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)