Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1302
         (601 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77456-1|AAC50870.1|  375|Homo sapiens nucleosome assembly prote...    44   4e-04
BC022090-1|AAH22090.1|  375|Homo sapiens nucleosome assembly pro...    44   4e-04
M86667-1|AAC37544.1|  391|Homo sapiens NAP protein.                    38   0.027
BT007023-1|AAP35669.1|  391|Homo sapiens nucleosome assembly pro...    38   0.027
BC002387-1|AAH02387.1|  391|Homo sapiens nucleosome assembly pro...    38   0.027

>U77456-1|AAC50870.1|  375|Homo sapiens nucleosome assembly protein
           2 protein.
          Length = 375

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 25/71 (35%), Positives = 34/71 (47%)
 Frame = +2

Query: 389 VNGTYEPNDDECLNPWRDDTEKEELASGGTXXXXXXXXXXXXXXAI*PPMDPNVKGIPDF 568
           + G  EP D E  + W  + E+EE  +G                A     +P+ KGIP+F
Sbjct: 110 ITGDVEPTDAE--SEWHSENEEEEKLAGDMKSKVVVTEK-----AAATAEEPDPKGIPEF 162

Query: 569 WYNIFRNVSML 601
           W+ IFRNV ML
Sbjct: 163 WFTIFRNVDML 173



 Score = 32.7 bits (71), Expect = 1.0
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +3

Query: 207 SPSCRSDGIPTPECSSRIRALRTLQKEFVDIEAKFYSEVH 326
           +PS   + +P      RI AL+ LQ     IEAKFY EVH
Sbjct: 51  TPSSYIETLPKA-VKRRINALKQLQVRCAHIEAKFYEEVH 89


>BC022090-1|AAH22090.1|  375|Homo sapiens nucleosome assembly
           protein 1-like 4 protein.
          Length = 375

 Score = 44.0 bits (99), Expect = 4e-04
 Identities = 25/71 (35%), Positives = 34/71 (47%)
 Frame = +2

Query: 389 VNGTYEPNDDECLNPWRDDTEKEELASGGTXXXXXXXXXXXXXXAI*PPMDPNVKGIPDF 568
           + G  EP D E  + W  + E+EE  +G                A     +P+ KGIP+F
Sbjct: 110 ITGDVEPTDAE--SEWHSENEEEEKLAGDMKSKVVVTEK-----AAATAEEPDPKGIPEF 162

Query: 569 WYNIFRNVSML 601
           W+ IFRNV ML
Sbjct: 163 WFTIFRNVDML 173



 Score = 32.7 bits (71), Expect = 1.0
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +3

Query: 207 SPSCRSDGIPTPECSSRIRALRTLQKEFVDIEAKFYSEVH 326
           +PS   + +P      RI AL+ LQ     IEAKFY EVH
Sbjct: 51  TPSSYIETLPKA-VKRRINALKQLQVRCAHIEAKFYEEVH 89


>M86667-1|AAC37544.1|  391|Homo sapiens NAP protein.
          Length = 391

 Score = 37.9 bits (84), Expect = 0.027
 Identities = 23/72 (31%), Positives = 35/72 (48%)
 Frame = +2

Query: 386 IVNGTYEPNDDECLNPWRDDTEKEELASGGTXXXXXXXXXXXXXXAI*PPMDPNVKGIPD 565
           I+N  YEP ++EC   W+ D E++E++                        DP  KGIP+
Sbjct: 120 IINAIYEPTEEEC--EWKPD-EEDEISEELKEKAKIEDEKKDEEKE-----DP--KGIPE 169

Query: 566 FWYNIFRNVSML 601
           FW  +F+NV +L
Sbjct: 170 FWLTVFKNVDLL 181



 Score = 33.1 bits (72), Expect = 0.77
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 255 RIRALRTLQKEFVDIEAKFYSEVH 326
           R+ AL+ LQ +   IEAKFY EVH
Sbjct: 77  RVNALKNLQVKCAQIEAKFYEEVH 100


>BT007023-1|AAP35669.1|  391|Homo sapiens nucleosome assembly
           protein 1-like 2 protein.
          Length = 391

 Score = 37.9 bits (84), Expect = 0.027
 Identities = 23/72 (31%), Positives = 35/72 (48%)
 Frame = +2

Query: 386 IVNGTYEPNDDECLNPWRDDTEKEELASGGTXXXXXXXXXXXXXXAI*PPMDPNVKGIPD 565
           I+N  YEP ++EC   W+ D E++E++                        DP  KGIP+
Sbjct: 120 IINAIYEPTEEEC--EWKPD-EEDEISEELKEKAKIEDEKKDEEKE-----DP--KGIPE 169

Query: 566 FWYNIFRNVSML 601
           FW  +F+NV +L
Sbjct: 170 FWLTVFKNVDLL 181



 Score = 33.1 bits (72), Expect = 0.77
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 255 RIRALRTLQKEFVDIEAKFYSEVH 326
           R+ AL+ LQ +   IEAKFY EVH
Sbjct: 77  RVNALKNLQVKCAQIEAKFYEEVH 100


>BC002387-1|AAH02387.1|  391|Homo sapiens nucleosome assembly
           protein 1-like 1 protein.
          Length = 391

 Score = 37.9 bits (84), Expect = 0.027
 Identities = 23/72 (31%), Positives = 35/72 (48%)
 Frame = +2

Query: 386 IVNGTYEPNDDECLNPWRDDTEKEELASGGTXXXXXXXXXXXXXXAI*PPMDPNVKGIPD 565
           I+N  YEP ++EC   W+ D E++E++                        DP  KGIP+
Sbjct: 120 IINAIYEPTEEEC--EWKPD-EEDEISEELKEKAKIEDEKKDEEKE-----DP--KGIPE 169

Query: 566 FWYNIFRNVSML 601
           FW  +F+NV +L
Sbjct: 170 FWLTVFKNVDLL 181



 Score = 33.1 bits (72), Expect = 0.77
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 255 RIRALRTLQKEFVDIEAKFYSEVH 326
           R+ AL+ LQ +   IEAKFY EVH
Sbjct: 77  RVNALKNLQVKCAQIEAKFYEEVH 100


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,486,295
Number of Sequences: 237096
Number of extensions: 1649897
Number of successful extensions: 10902
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10900
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)