Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1302
         (601 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p pro...    31   0.91 
AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.1...    31   0.91 
AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA ...    31   0.91 
AE014134-551|AAF51149.1| 2409|Drosophila melanogaster CG3524-PA ...    30   2.8  
U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome ass...    29   4.8  
BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p pro...    29   4.8  
AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA...    29   4.8  

>AY058402-1|AAL13631.1|  375|Drosophila melanogaster GH17085p
           protein.
          Length = 375

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 533 PMDPNVKGIPDFWYNIFRNVSML 601
           P+ P   G+P FW  +F+NV +L
Sbjct: 170 PVSPTTLGVPRFWLTVFQNVPLL 192


>AL109630-5|CAB65874.1|  375|Drosophila melanogaster EG:BACR7A4.18
           protein.
          Length = 375

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 533 PMDPNVKGIPDFWYNIFRNVSML 601
           P+ P   G+P FW  +F+NV +L
Sbjct: 170 PVSPTTLGVPRFWLTVFQNVPLL 192


>AE014298-125|AAF45565.2|  375|Drosophila melanogaster CG3708-PA
           protein.
          Length = 375

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 533 PMDPNVKGIPDFWYNIFRNVSML 601
           P+ P   G+P FW  +F+NV +L
Sbjct: 170 PVSPTTLGVPRFWLTVFQNVPLL 192


>AE014134-551|AAF51149.1| 2409|Drosophila melanogaster CG3524-PA
           protein.
          Length = 2409

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
 Frame = +1

Query: 154 HLLKSGVTRNEMIAAITNRLHAEAMASLPPNVRR-ESAP*ELFRRSLSTLRPSFTVKYMH 330
           HL  +G   N +I+ +   L  +A+  +P N    E AP  LFR  L +L P  +   + 
Sbjct: 754 HLASAGYFINNLISPV---LFHQAVKRIPQNALIVEIAPHGLFRAILRSLSPQISYVSLM 810

Query: 331 SNANMKNFTSLFIKKRRSY 387
              +  NF  L  +  R Y
Sbjct: 811 QRGHANNFEFLLSQLGRLY 829


>U39553-1|AAB07898.1|  370|Drosophila melanogaster nucleosome
           assembly protein NAP-1 protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 545 NVKGIPDFWYNIFRNVSML 601
           + KGIP FW  +FRN +++
Sbjct: 142 DAKGIPGFWLTVFRNTAIM 160


>BT001479-1|AAN71234.1|  370|Drosophila melanogaster LD21576p
           protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 545 NVKGIPDFWYNIFRNVSML 601
           + KGIP FW  +FRN +++
Sbjct: 142 DAKGIPGFWLTVFRNTAIM 160


>AE013599-3725|AAF47097.1|  370|Drosophila melanogaster CG5330-PA
           protein.
          Length = 370

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 545 NVKGIPDFWYNIFRNVSML 601
           + KGIP FW  +FRN +++
Sbjct: 142 DAKGIPGFWLTVFRNTAIM 160


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,149,018
Number of Sequences: 53049
Number of extensions: 499793
Number of successful extensions: 1085
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)