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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1302
         (601 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   1.7  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    23   3.0  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   4.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.3  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   5.3  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   7.0  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.0  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.0  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.0  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   9.2  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   9.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   9.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 336 IRVHVLHCKTWPQCRQTPSEEFSRRGFATNIRG*GCH 226
           ++ HVL   T P+ + TP  +  R     NIR   CH
Sbjct: 391 VQTHVLTIHTIPEVKVTPRFQAKRLKEEANIR---CH 424


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 491 DGSILYRPRLTLLFQC 444
           DG ILY  RLT+  +C
Sbjct: 147 DGDILYSMRLTIKAKC 162


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 416 DECLNPWRDDTEKEELASGG 475
           DEC   W  D+ K ++A GG
Sbjct: 254 DECDRLWILDSGKVDIAKGG 273


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 419 ECLNPWRDDTEKEELAS 469
           + L  W DD+++EEL++
Sbjct: 34  QMLGIWADDSDEEELSA 50


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 451 FSVITPWVETFIIIRFICAIHN 386
           +  ITP ++  + I   C +HN
Sbjct: 312 YKYITPLIQKHLKIHDTCGVHN 333


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -3

Query: 509 FFLTLSDGSILYRPRLTLLFQC 444
           F     DG +LY  RLT+   C
Sbjct: 109 FVRLYQDGRVLYSSRLTIKAGC 130


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 398 TYEPNDDECLNPWRDDTEKEELASGGT 478
           T E + D+CL   +++     + SGG+
Sbjct: 418 TLEKSQDDCLKAIKENNADLTVVSGGS 444


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 398 TYEPNDDECLNPWRDDTEKEELASGGT 478
           T E + D+CL   +++     + SGG+
Sbjct: 418 TLEKSQDDCLKAIKENNADLTVVSGGS 444


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 398 TYEPNDDECLNPWRDDTEKEELASGGT 478
           T E + D+CL   +++     + SGG+
Sbjct: 418 TLEKSQDDCLKAIKENNADLTVVSGGS 444


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 521 PCHPFFLTLSDGSILYRPRLTLLFQC 444
           P H  +L   D ++LY  +LTL+  C
Sbjct: 108 PNHYLWL-YHDKTLLYMSKLTLVLSC 132


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 271 ELFRRSLSTLRPSFTVKY 324
           E FRR +ST+   F V+Y
Sbjct: 451 EKFRRWVSTMSRPFEVRY 468


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 544 GIHWRLDSLVILFSSPSVMAAFC 476
           G+ W L  L +LF++  +  +FC
Sbjct: 132 GLGWLLLMLYLLFATLPLRLSFC 154


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,474
Number of Sequences: 438
Number of extensions: 2972
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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