BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--1300 (678 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 27 0.19 AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 23 1.7 DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory pro... 23 2.3 DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory pro... 22 4.0 DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory pro... 22 4.0 EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive pep... 22 5.3 AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 22 5.3 >EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D protein. Length = 255 Score = 26.6 bits (56), Expect = 0.19 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%) Frame = +2 Query: 509 RCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSP 604 R R VVPP C P+T+ P P D++ P Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227 >AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle protein. Length = 361 Score = 23.4 bits (48), Expect = 1.7 Identities = 12/41 (29%), Positives = 20/41 (48%) Frame = +3 Query: 438 EKMTQIMFETFNTPAMYVASKPCSAVRVRSYHRYRAGLRRR 560 E+M QI+ + F++ M + C AV + A +RR Sbjct: 195 ERMVQIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRR 235 >DQ855500-1|ABH88187.1| 126|Tribolium castaneum chemosensory protein 14 protein. Length = 126 Score = 23.0 bits (47), Expect = 2.3 Identities = 7/14 (50%), Positives = 11/14 (78%) Frame = -2 Query: 92 GTRREEHHLLRNRP 51 G R+ HHL++N+P Sbjct: 82 GVRKVLHHLIKNKP 95 >DQ855502-1|ABH88189.1| 126|Tribolium castaneum chemosensory protein 16 protein. Length = 126 Score = 22.2 bits (45), Expect = 4.0 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -2 Query: 92 GTRREEHHLLRNRP 51 G R+ HHL+ N+P Sbjct: 82 GVRKVIHHLIENKP 95 >DQ855495-1|ABH88182.1| 126|Tribolium castaneum chemosensory protein 9 protein. Length = 126 Score = 22.2 bits (45), Expect = 4.0 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = -2 Query: 92 GTRREEHHLLRNRP 51 G R+ HHL+ N+P Sbjct: 82 GVRKVIHHLIENKP 95 >EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive peptide receptor 2 protein. Length = 354 Score = 21.8 bits (44), Expect = 5.3 Identities = 10/26 (38%), Positives = 10/26 (38%) Frame = +1 Query: 451 RSCSKHSTRPPCTSHPSRAPLYASGR 528 R C H RPP H AS R Sbjct: 249 RQCDDHRDRPPRHFHEEHDTRRASSR 274 >AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neuroblasts defectiveprotein protein. Length = 224 Score = 21.8 bits (44), Expect = 5.3 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = +3 Query: 570 HRAHLRRIRTPPRHSASGLSRSXP 641 H+A +R + PP+ RS P Sbjct: 62 HKAPIRPVALPPKREIPSPKRSSP 85 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 178,838 Number of Sequences: 336 Number of extensions: 4264 Number of successful extensions: 9 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 122,585 effective HSP length: 55 effective length of database: 104,105 effective search space used: 17697850 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -