Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1300
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    27   0.19 
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    23   1.7  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.3  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   4.0  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   4.0  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   5.3  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   5.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 509 RCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSP 604
           R  R VVPP   C  P+T+ P P     D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 438 EKMTQIMFETFNTPAMYVASKPCSAVRVRSYHRYRAGLRRR 560
           E+M QI+ + F++  M +    C AV +       A  +RR
Sbjct: 195 ERMVQIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRR 235


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 92  GTRREEHHLLRNRP 51
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 92  GTRREEHHLLRNRP 51
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 92  GTRREEHHLLRNRP 51
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 10/26 (38%), Positives = 10/26 (38%)
 Frame = +1

Query: 451 RSCSKHSTRPPCTSHPSRAPLYASGR 528
           R C  H  RPP   H       AS R
Sbjct: 249 RQCDDHRDRPPRHFHEEHDTRRASSR 274


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 570 HRAHLRRIRTPPRHSASGLSRSXP 641
           H+A +R +  PP+       RS P
Sbjct: 62  HKAPIRPVALPPKREIPSPKRSSP 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,838
Number of Sequences: 336
Number of extensions: 4264
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)