Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1300
(678 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 7e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 1e-45
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 180 1e-45
SB_56| Best HMM Match : Actin (HMM E-Value=0) 179 2e-45
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 2e-45
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 178 4e-45
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 98 5e-21
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 85 7e-17
SB_54| Best HMM Match : Actin (HMM E-Value=0) 84 9e-17
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 55 5e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 52 6e-07
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 46 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 39 0.004
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 38 0.006
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.65
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.65
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 0.86
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 0.86
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.1
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_27921| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24) 30 2.0
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 3.5
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 3.5
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 3.5
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 3.5
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 3.5
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 3.5
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 29 4.6
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16) 29 4.6
SB_49062| Best HMM Match : GLTT (HMM E-Value=6e-25) 28 6.0
SB_34765| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 6.0
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_31102| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 28 8.0
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 180 bits (439), Expect = 7e-46
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 181
D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 182 RGILTLKYPIEHGIVTNWDDMEKI 253
RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDY
Sbjct: 143 LYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDY 189
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFN+PAMYVA
Sbjct: 117 REKMTQIMFETFNSPAMYVA 136
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 180 bits (438), Expect = 1e-45
Identities = 90/121 (74%), Positives = 100/121 (82%)
Frame = +2
Query: 2 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 181
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 182 RGILTLKYPIEHGIVTNWDDMEKICIIPSTMSCVSPPRNTQSCSLRLPSTPRPTGEFIDA 361
RGILTLKYPIEHGIVTNWDDMEKI T + + Q+ L L ++ R TG +D+
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMF--ETFNSPAMYVAIQAV-LSLYASGRTTGIVMDS 118
Query: 362 G 364
G
Sbjct: 119 G 119
Score = 99.5 bits (237), Expect = 2e-21
Identities = 44/47 (93%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDY
Sbjct: 105 LYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDY 151
Score = 34.3 bits (75), Expect = 0.092
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +3
Query: 438 EKMTQIMFETFNTPAMYVA 494
+ M +IMFETFN+PAMYVA
Sbjct: 80 DDMEKIMFETFNSPAMYVA 98
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 180 bits (437), Expect = 1e-45
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 181
D++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 182 RGILTLKYPIEHGIVTNWDDMEKI 253
RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
Score = 100 bits (239), Expect = 1e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 143 LYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFN+PAMYVA
Sbjct: 117 REKMTQIMFETFNSPAMYVA 136
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 179 bits (436), Expect = 2e-45
Identities = 82/84 (97%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 181
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 182 RGILTLKYPIEHGIVTNWDDMEKI 253
RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKI 85
Score = 100 bits (239), Expect = 1e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 142 LYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 188
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 89 TFYNELRVAPEEHPVLLTEAPLNPKANR 116
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFN+PAMYVA
Sbjct: 116 REKMTQIMFETFNSPAMYVA 135
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 179 bits (435), Expect = 2e-45
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 181
D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 182 RGILTLKYPIEHGIVTNWDDMEKI 253
RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 57.6 bits (133), Expect = 9e-09
Identities = 27/31 (87%), Positives = 29/31 (93%), Gaps = 2/31 (6%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYE--GYA 597
LYASGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 143 LYASGRTTGIVMDSGDGVSHTVPIYEERGYS 173
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFN+PAMYVA
Sbjct: 117 REKMTQIMFETFNSPAMYVA 136
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 178 bits (433), Expect = 4e-45
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 181
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 182 RGILTLKYPIEHGIVTNWDDMEKI 253
RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKI 85
Score = 100 bits (239), Expect = 1e-21
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 142 LYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY 188
Score = 63.7 bits (148), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 89 TFYNELRVAPEEHPVLLTEAPLNPKANR 116
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFN+PAMYVA
Sbjct: 116 REKMTQIMFETFNSPAMYVA 135
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 98.3 bits (234), Expect = 5e-21
Identities = 44/47 (93%), Positives = 45/47 (95%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 21 LYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDY 67
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 453 IMFETFNTPAMYVA 494
IMFE FN+PA+YVA
Sbjct: 1 IMFEAFNSPAVYVA 14
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 84.6 bits (200), Expect = 7e-17
Identities = 34/47 (72%), Positives = 45/47 (95%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYA+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ Y
Sbjct: 168 LYATGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRY 214
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +1
Query: 295 EHPVLLTEAPLNPKANR 345
+HPVLLTEAPLNP+ NR
Sbjct: 126 QHPVLLTEAPLNPRRNR 142
Score = 31.1 bits (67), Expect = 0.86
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REK ++ FETFN PA++++
Sbjct: 142 REKAAEVFFETFNVPALFIS 161
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 84.2 bits (199), Expect = 9e-17
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT Y
Sbjct: 2187 LYASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHY 2233
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 20 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 121
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +1
Query: 268 YNELRVAPEEHPVLLTEAPLNPKANR 345
+++LRV E+ PVLLTEAPLNPK NR
Sbjct: 2136 FDQLRVRGEDFPVLLTEAPLNPKMNR 2161
Score = 36.7 bits (81), Expect = 0.017
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVASKPCSAV 515
RE+M Q+MFE+FN P MYVA + A+
Sbjct: 2161 RERMVQLMFESFNVPCMYVAVQAVMAL 2187
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 81.8 bits (193), Expect = 5e-16
Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Frame = +2
Query: 14 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 187
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 188 ILTLKYPIEHGIVTNWDDMEKICIIPSTMSCVS-PPRNTQSCSLRLPSTPRPTGE 349
+L + YP+++GIV NWDDM+ + S ++ PRNT+ P P E
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNRE 121
Score = 75.8 bits (178), Expect = 3e-14
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYA G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T Y
Sbjct: 146 LYAQGLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKY 192
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 5 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 121
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 55.2 bits (127), Expect = 5e-08
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Frame = +2
Query: 17 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRG 187
A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD GD A +K G
Sbjct: 702 AIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSG 761
Query: 188 ILTL 199
++ L
Sbjct: 762 VMHL 765
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 648
LYASG T G+ L SG + IYEG+ L H + L++ G LT+
Sbjct: 772 LYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTE 817
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 51.6 bits (118), Expect = 6e-07
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +1
Query: 532 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 645
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 99
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/44 (45%), Positives = 31/44 (70%)
Frame = +1
Query: 514 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 645
+A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 76 FANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFIT 119
Score = 30.3 bits (65), Expect = 1.5
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYV 491
REK+T++MFE +N PA ++
Sbjct: 49 REKLTELMFEKYNVPAFFL 67
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 118 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 2
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/84 (27%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +2
Query: 8 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 187
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 188 ILTLKY--PIEHGIVTNWDDMEKI 253
L Y P + G + NWD ++I
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQI 307
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 134 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEK 250
G+ D ++GDEA K T K+PI H IV +WD ME+
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMER 315
Score = 32.3 bits (70), Expect = 0.37
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 532 TGIVLDSGDGVSHTVPI 582
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 93 GNTARGASSPAKPALHIPEPLSTT 22
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_40727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1393
Score = 31.5 bits (68), Expect = 0.65
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 452 DHVRNIQHARH--VRRIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPFCVWT 625
D + N++ H V+ I + PP++ T + S TP +T + + + T
Sbjct: 655 DKINNMETTHHPAVQTIPIIKTSATTQTPPIASTTDTSTSQTPPIATTPSLTTQTTLIAT 714
Query: 626 *PVXTSQTTLM 658
P T+QTTL+
Sbjct: 715 TPSLTTQTTLI 725
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.65
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 64 CETGLAHT 41
CET L T
Sbjct: 252 CETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.65
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 93 GNTARGASSPAKPALHIPEPLSTT 22
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 31.1 bits (67), Expect = 0.86
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = +2
Query: 512 CTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 604
CT+ +P +TP T TPC PST+ +H+P
Sbjct: 859 CTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 0.86
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 64 CETGLAHT 41
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 0.86
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 64 CETGLAHT 41
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 0.86
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 64 CETGLAHT 41
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 64 CETGLAHT 41
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 64 CETGLAHT 41
CET L T
Sbjct: 288 CETQLVLT 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 64 CETGLAHT 41
CET L T
Sbjct: 212 CETQLVLT 219
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 93 GNTARGASSPAKPALHIPEPLSTT 22
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 509 RCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTP--FCVWT*PVXTSQTTLMKI 664
R P+ PP C + V PT P S+K + SP+P FC ++ TS T + +
Sbjct: 328 RTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPSTFCHYSTEKITSSRTFVPV 381
>SB_27921| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -1
Query: 384 PKGKVHSPASMNSPVGLGVEGSLSEQDWVFLGGDTQLIVEGMMQIFSMSSQL 229
P G + SP + G+GV ++ D GGDT+ G+ I S +L
Sbjct: 243 PPGSLESPVLNSDTQGVGVNAEGAQVDCEDTGGDTKTSASGVQDIGSGRKRL 294
>SB_12978| Best HMM Match : Flavodoxin_1 (HMM E-Value=3.8e-24)
Length = 1592
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 330 VEGSLSEQDWVFLGGDTQLIVEGMMQ-IFSMSSQLVTIP 217
+ SL++Q+W + D Q+IVEG MQ ++M Q +P
Sbjct: 1329 IRQSLTKQEWRWQMDDPQMIVEGAMQNHYNMIKQFRGVP 1367
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 175 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 41
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_39222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1651
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = +2
Query: 242 MEKICIIPSTMSCVSPPRNTQSCSLRLPSTPRPTGEFIDAGLCTLPFGRWALIDRYLTSD 421
ME + ++P T S S PR + ++ P P T+P G ALID Y SD
Sbjct: 995 MEPVELVPVTPSPTSTPREELTVAVSRTEEPCPRTPLN----VTIPSGGLALIDSYYESD 1050
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 222 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 280
Query: 64 CETGLAHT 41
CET L T
Sbjct: 281 CETQLVLT 288
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 83 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 141
Query: 64 CETGLAHT 41
CET L T
Sbjct: 142 CETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 1621 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 1679
Query: 64 CETGLAHT 41
CET L T
Sbjct: 1680 CETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 649 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 707
Query: 64 CETGLAHT 41
CET L T
Sbjct: 708 CETQLVLT 715
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 506 LRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
++ TRP VP +T PTP P T P P
Sbjct: 929 IQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIP 963
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 64 CETGLAHT 41
CET L T
Sbjct: 263 CETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 1059 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 1117
Query: 64 CETGLAHT 41
CET L T
Sbjct: 1118 CETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 64 CETGLAHT 41
CET L T
Sbjct: 61 CETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 241 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 65
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 83 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 141
Query: 64 CETGLAHT 41
CET L T
Sbjct: 142 CETQLVLT 149
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 521 PVVPPVSCWTPATVSPTPCPSTKDTHSPTPFCV 619
P+ PPVS P P P PS+ D PF V
Sbjct: 1895 PLTPPVS--PPERDQPPPSPSSSDPFGSAPFLV 1925
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 512 CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 610
C+RP PPV+ T +T S T +T T + TP
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTP 651
>SB_56497| Best HMM Match : Extensin_2 (HMM E-Value=0.16)
Length = 814
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +2
Query: 521 PVVPPVSCWTPATVSPTPCPSTKDTHSPTPFCV 619
P+ PPVS P P P PS+ D PF V
Sbjct: 549 PLTPPVS--PPERDQPPPSPSSSDPFGSAPFLV 579
>SB_49062| Best HMM Match : GLTT (HMM E-Value=6e-25)
Length = 407
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/76 (21%), Positives = 28/76 (36%)
Frame = +2
Query: 158 VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKICIIPSTMSCVSPPRNTQSCSLRLPSTPR 337
+GD ++ I G+V+ D E + ++ T CV +T C + + T
Sbjct: 161 MGDTSECVVSIGDTSSDTSEGVVSKGDTSEGVVLMGDTSECVVSIGDTSECVVSIGDTSE 220
Query: 338 PTGEFIDAGLCTLPFG 385
D C + G
Sbjct: 221 GVVSIGDTSECVVSMG 236
>SB_34765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 224 VTNWDDMEKICIIPSTMSCVSPPRNTQSCSLRLPSTPRPTGE 349
V W++ ++ P SPP + + + LPS P PT E
Sbjct: 78 VEKWENQPEMESTPLPKYYTSPPEDERPLPITLPSEPAPTLE 119
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -3
Query: 181 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 50
FA CL + V+LSH + H L A +HG R+ SCET L
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 506
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 93 GNTARGASSPAKPALHIPEPLSTT 22
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 515 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPFCVW 622
T P P T TV PT PS D T C W
Sbjct: 1702 TNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 93 GNTARGASSPAKPALHIPEPLSTT 22
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_31102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 168
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +2
Query: 488 RRIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPF 613
+ A LR P P S TP + PTP +T + P PF
Sbjct: 85 KETDAQLRTPLPSPPSESPSTPFGILPTPPTNTPKSRIPRPF 126
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = +2
Query: 491 RIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPFC 616
R +A C R VPPVS +P PC P C
Sbjct: 635 RFKAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPPYSTC 676
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,620,194
Number of Sequences: 59808
Number of extensions: 652044
Number of successful extensions: 2224
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2208
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1745338465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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