BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1300
(678 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein. 182 9e-48
U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein. 182 9e-48
U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein. 182 9e-48
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 173 6e-45
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 28 0.31
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 28 0.31
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 27 0.72
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 27 0.72
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 27 0.72
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 27 0.72
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 27 0.72
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 26 0.95
AY659931-1|AAT51799.1| 167|Anopheles gambiae lysozyme i-1 protein. 26 1.3
AY324313-1|AAQ89698.1| 160|Anopheles gambiae insulin-like pepti... 26 1.3
AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein. 24 3.8
AY752910-1|AAV30084.1| 250|Anopheles gambiae peroxidase 15 prot... 24 5.1
AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.1
AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.1
AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.1
AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein. 24 5.1
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 24 5.1
EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein. 23 8.9
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 8.9
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 8.9
>U02964-1|AAA03444.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 182 bits (443), Expect = 9e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 181
DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 182 RGILTLKYPIEHGIVTNWDDMEKI 253
RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
Score = 102 bits (244), Expect = 1e-23
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 143 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 63.7 bits (148), Expect = 5e-12
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 45.6 bits (103), Expect = 1e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFNTPAMYVA
Sbjct: 117 REKMTQIMFETFNTPAMYVA 136
>U02933-1|AAA56882.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 182 bits (443), Expect = 9e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 181
DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 182 RGILTLKYPIEHGIVTNWDDMEKI 253
RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
Score = 102 bits (244), Expect = 1e-23
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 143 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 63.7 bits (148), Expect = 5e-12
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 45.6 bits (103), Expect = 1e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFNTPAMYVA
Sbjct: 117 REKMTQIMFETFNTPAMYVA 136
>U02930-1|AAA56881.1| 376|Anopheles gambiae actin 1D protein.
Length = 376
Score = 182 bits (443), Expect = 9e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 181
DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 182 RGILTLKYPIEHGIVTNWDDMEKI 253
RGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKI 86
Score = 102 bits (244), Expect = 1e-23
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY
Sbjct: 143 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 189
Score = 63.7 bits (148), Expect = 5e-12
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPKANR
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKANR 117
Score = 45.6 bits (103), Expect = 1e-06
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETFNTPAMYVA
Sbjct: 117 REKMTQIMFETFNTPAMYVA 136
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 173 bits (420), Expect = 6e-45
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +2
Query: 2 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 181
D++ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQSK
Sbjct: 3 DDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQSK 62
Query: 182 RGILTLKYPIEHGIVTNWDDMEKI 253
RGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 63 RGILTLKYPIEHGIITNWDDMEKI 86
Score = 101 bits (241), Expect = 3e-23
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +1
Query: 511 LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDY 651
LYASGRTTG+VLDSGDGVSHTVPIYEGYALPHAILR+DLAGRDLTDY
Sbjct: 143 LYASGRTTGVVLDSGDGVSHTVPIYEGYALPHAILRMDLAGRDLTDY 189
Score = 62.5 bits (145), Expect = 1e-11
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +1
Query: 262 TFYNELRVAPEEHPVLLTEAPLNPKANR 345
TFYNELRVAPEEHPVLLTEAPLNPK+NR
Sbjct: 90 TFYNELRVAPEEHPVLLTEAPLNPKSNR 117
Score = 38.7 bits (86), Expect = 2e-04
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 435 REKMTQIMFETFNTPAMYVA 494
REKMTQIMFETF PA+YVA
Sbjct: 117 REKMTQIMFETFAAPAVYVA 136
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 27.9 bits (59), Expect = 0.31
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +2
Query: 485 VRRIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPFCVWT*PVXTSQT 649
+R LR T ++ T + T P+T T +PT WT P T+ T
Sbjct: 101 LRPATTTLRPTTTTTDWITTTTTEATTTTRFPTTTTTSAPTTPSQWTDPTITTTT 155
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 27.9 bits (59), Expect = 0.31
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = +2
Query: 485 VRRIQAVLRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPFCVWT*PVXTSQT 649
+R LR T ++ T + T P+T T +PT WT P T+ T
Sbjct: 101 LRPATTTLRPTTTTTDWITTTTTEATTTTRFPTTTTTSAPTTPSQWTDPTITTTT 155
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.72
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 518 RPVVPPVSCWTPATVSP----TPCPSTKDTHSPTPFCVWT*PVXTSQTTL 655
RP + W T + T P+T T +PT WT P T+ T +
Sbjct: 109 RPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTTPI 158
Score = 25.0 bits (52), Expect = 2.2
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 521 PVVPPVSCWT-PATVSPTPCPSTKDTHSPTP 610
P + WT P + TP P+T T S P
Sbjct: 181 PTTTTTTVWTDPTATTTTPAPTTTTTWSDLP 211
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.72
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 518 RPVVPPVSCWTPATVSP----TPCPSTKDTHSPTPFCVWT*PVXTSQTTL 655
RP + W T + T P+T T +PT WT P T+ T +
Sbjct: 109 RPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTTPI 158
Score = 25.0 bits (52), Expect = 2.2
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 521 PVVPPVSCWT-PATVSPTPCPSTKDTHSPTP 610
P + WT P + TP P+T T S P
Sbjct: 181 PTTTTTTVWTDPTATTTTPAPTTTTTWSDLP 211
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.72
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 518 RPVVPPVSCWTPATVSP----TPCPSTKDTHSPTPFCVWT*PVXTSQTTL 655
RP + W T + T P+T T +PT WT P T+ T +
Sbjct: 109 RPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTTPI 158
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.72
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 518 RPVVPPVSCWTPATVSP----TPCPSTKDTHSPTPFCVWT*PVXTSQTTL 655
RP + W T + T P+T T +PT WT P T+ T +
Sbjct: 109 RPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTTPI 158
Score = 24.2 bits (50), Expect = 3.8
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 530 PPVSCWTPATVSPTPCPSTKDTHSPTPFCVWT---*PVXTSQTTL 655
PP + T PT +T TH+PT W+ P T+ TT+
Sbjct: 180 PPTTTTTTVWTDPT---ATTTTHAPTTTTTWSDLPPPPPTTTTTV 221
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 26.6 bits (56), Expect = 0.72
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 4/50 (8%)
Frame = +2
Query: 518 RPVVPPVSCWTPATVSP----TPCPSTKDTHSPTPFCVWT*PVXTSQTTL 655
RP + W T + T P+T T +PT WT P T+ T +
Sbjct: 109 RPTTTTTTDWITTTTTEATTTTTFPTTTTTSAPTTPSQWTDPTITTTTPI 158
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 26.2 bits (55), Expect = 0.95
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = +2
Query: 518 RPVVPPVSCWTPATVSP----TPCPSTKDTHSPTPFCVWT*PVXTSQT 649
RP + W T + T P+T T +PT WT P T+ T
Sbjct: 109 RPTTTTTTDWITTTTTEATTTTKFPTTTTTSAPTTPSQWTDPTITTTT 156
Score = 24.2 bits (50), Expect = 3.8
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 530 PPVSCWTPATVSPTPCPSTKDTHSPTPFCVWT---*PVXTSQTTL 655
PP + T PT +T TH+PT W+ P T+ TT+
Sbjct: 180 PPTTTTTTVWTDPT---ATTTTHAPTTTTTWSDLPPPPPTTTTTV 221
>AY659931-1|AAT51799.1| 167|Anopheles gambiae lysozyme i-1 protein.
Length = 167
Score = 25.8 bits (54), Expect = 1.3
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = -2
Query: 503 RLGCDVHG-GRVECFEHDLGHLL 438
+ G D +G GR++CF+H + H L
Sbjct: 112 KFGQDCNGDGRIDCFDHAIVHKL 134
>AY324313-1|AAQ89698.1| 160|Anopheles gambiae insulin-like peptide
6 precursor protein.
Length = 160
Score = 25.8 bits (54), Expect = 1.3
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = -1
Query: 318 LSEQDWVFLGGDTQLIVEGMMQIFSMSSQLVTIPCSM 208
++ +DW+ + +TQ I++ +Q M T+P M
Sbjct: 69 MATEDWMNVEDNTQQILDQQLQSVGMPDDRATVPAWM 105
>AY341184-1|AAR13748.1| 187|Anopheles gambiae GNBP A1 protein.
Length = 187
Score = 24.2 bits (50), Expect = 3.8
Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 6/40 (15%)
Frame = +2
Query: 515 TRPVVPPVSCWT-----PATVSPTPCPSTKDT-HSPTPFC 616
T+ V P S T P T +P PCP T T + P C
Sbjct: 117 TKATVAPKSTTTTTTVKPTTTTPPPCPPTLTTFNGGQPTC 156
>AY752910-1|AAV30084.1| 250|Anopheles gambiae peroxidase 15
protein.
Length = 250
Score = 23.8 bits (49), Expect = 5.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 426 FCFREKMTQIMFETFNTPAMYVASKPCSAVRVRSYHRYRAGL 551
F F + E ++ ++ASK S + R Y YRAG+
Sbjct: 137 FRFGHSLLPTAVERWSKAHKFIASKRLSDLIRRPYDLYRAGV 178
>AY341187-1|AAR13751.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.1
Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +2
Query: 551 PATVSPTPCPSTKDT-HSPTPFC 616
P T +P PCP T T + P C
Sbjct: 136 PTTTTPPPCPPTLTTFNGGQPTC 158
>AY341186-1|AAR13750.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.1
Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +2
Query: 551 PATVSPTPCPSTKDT-HSPTPFC 616
P T +P PCP T T + P C
Sbjct: 136 PTTTTPPPCPPTLTTFNGGQPTC 158
>AY341185-1|AAR13749.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.1
Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +2
Query: 551 PATVSPTPCPSTKDT-HSPTPFC 616
P T +P PCP T T + P C
Sbjct: 136 PTTTTPPPCPPTLTTFNGGQPTC 158
>AY341183-1|AAR13747.1| 189|Anopheles gambiae GNBP A1 protein.
Length = 189
Score = 23.8 bits (49), Expect = 5.1
Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
Frame = +2
Query: 551 PATVSPTPCPSTKDT-HSPTPFC 616
P T +P PCP T T + P C
Sbjct: 136 PTTTTPPPCPPTLTTFNGGQPTC 158
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.8 bits (49), Expect = 5.1
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 103 GKAPPSGRDGRYGTEGL 153
G+ P GRDG +G GL
Sbjct: 344 GQPGPRGRDGNFGPVGL 360
>EF519478-1|ABP73565.1| 165|Anopheles gambiae CTLMA2 protein.
Length = 165
Score = 23.0 bits (47), Expect = 8.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 109 PSHDRGEHGARSIISC 62
P+H RGEHG + C
Sbjct: 121 PNHARGEHGQQPAERC 136
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.0 bits (47), Expect = 8.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 464 FEHDLGHLLSETEQSHS 414
FE D+G+L+ + SHS
Sbjct: 501 FEFDMGYLIKLAQHSHS 517
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.0 bits (47), Expect = 8.9
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -2
Query: 464 FEHDLGHLLSETEQSHS 414
FE D+G+L+ + SHS
Sbjct: 501 FEFDMGYLIKLAQHSHS 517
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 844,057
Number of Sequences: 2352
Number of extensions: 20888
Number of successful extensions: 101
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 101
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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